Difference between revisions of "Os01g0833700"

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(Created page with "{{JaponicaGene| GeneName = Os01g0833700| Description = Clathrin adaptor complex, medium chain family protein| Version = NM_001051250.1 GI:115440870 GeneID:4327409| Length ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0833700|
 
GeneName = Os01g0833700|

Revision as of 19:01, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0833700

Description

Clathrin adaptor complex, medium chain family protein

Version

NM_001051250.1 GI:115440870 GeneID:4327409

Length

7420 bp

Definition

Oryza sativa Japonica Group Os01g0833700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:37456284..37463703

Sequence Coding Region

37456537..37456626,37457562..37457658,37457758..37457820,37458667..37458820,37458891..37459077
,37459589..37459902,37460667..37460808,37461033..37461275,37461609..37461832
,37462177..37462216,37462397..37462399

Expression

GEO Profiles:Os01g0833700

Genome Context

<gbrowseImage1> name=NC_008394:37456284..37463703 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:37456284..37463703 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtggttcttgcagcttctattatatcgaagtctggaaaagctcttgtttcgagacaatttgttgacatgtcccggataaggatcgatgggctgcttgcagcatttccgaagctggtcggaagtggaaagcaacatacttatgttgagactgaaaatgttcgttatgtctatcaaccaattgaagcactgtatttgcttctcatcacaaataagcaaagtaacattcttgaagatctggatactttaaggctactctccaagcttatacctgaatatgctccctctttggatgaagagggtgtctgtaaggcagcattcgagcttctgtttgcctttattgaagccatttctcttggaaacaaagagaacgtaactgttgcacaagttaaacaatactgtgaaatggagagccatgaagaaaagctgcacaagctggttatgcaaagcaaaataaatgaaactaaggatgtcatgaggaggaaagtcactgagattgagaaaagcaagactgatagagggaagcctgacaagggaggatttggatccttgagaactccaaacagcttcagtgacatgggcattagaggtggtggtccagggggcgatcctatatttggtgatatggactcgttcacccacaaggccaaaggccgcccatctgctcctgctcctgcatctgcttctactaaagttcctggtggtatgaaattaagcaaagcacagaagacaaaccagttccttgagtctttgaaagctgaaggagaagtcattttggaggacactcaaccaagtgcaactcaatcaaggtcatcatatatcccaccaagcgatcctatcacagtgacaattgaagagaagctcaatgtcactgttaaaagggatgggggagttagcaattttgatattcaaggaaccctggctctccaaattctgaatgacactgatggttttattcagttacagattgagaaccaagatgtacctggccttaacttcaagacacaccccaatatcaacaaagagttattcaacagtcaacaaattgtgggggcaaaagatccaaacaggcctttccccagtggtcaaaatgaaacaccgttggtgaaatggagaatccaggagttgaatgagtcatctcttccattggcagtgaactgttggccttcggtgtccggaaatgaaacctatgtgaacattgaatatgaagcttcagagatgtttgatttgcacaatgttgtcatctctatccctctccccgcacttagggaggctccaggtgttaggcagatagacggagaatggaggtatgactcaagaaattcagtgttggagtggtccattattcttgttgatcaatcaaaccgcagtggttctttggagttcactgtccctgcagctgatccatcaacattcttcccgatatctgttgggttttctgcatcaaatacatttagtgatttgaaggtgaccgccatccgtccgctgagggaaggtagcccaccaaagttttctcagaggaatcgattggttacttataactaccaagtggtttga</cdnaseq>

Protein Sequence

<aaseq>MVVLAASIISKSGKALVSRQFVDMSRIRIDGLLAAFPKLVGSGK QHTYVETENVRYVYQPIEALYLLLITNKQSNILEDLDTLRLLSKLIPEYAPSLDEEGV CKAAFELLFAFIEAISLGNKENVTVAQVKQYCEMESHEEKLHKLVMQSKINETKDVMR RKVTEIEKSKTDRGKPDKGGFGSLRTPNSFSDMGIRGGGPGGDPIFGDMDSFTHKAKG RPSAPAPASASTKVPGGMKLSKAQKTNQFLESLKAEGEVILEDTQPSATQSRSSYIPP SDPITVTIEEKLNVTVKRDGGVSNFDIQGTLALQILNDTDGFIQLQIENQDVPGLNFK THPNINKELFNSQQIVGAKDPNRPFPSGQNETPLVKWRIQELNESSLPLAVNCWPSVS GNETYVNIEYEASEMFDLHNVVISIPLPALREAPGVRQIDGEWRYDSRNSVLEWSIIL VDQSNRSGSLEFTVPAADPSTFFPISVGFSASNTFSDLKVTAIRPLREGSPPKFSQRN RLVTYNYQVV</aaseq>

Gene Sequence

<dnaseqindica>7078..7167#6046..6142#5884..5946#4884..5037#4627..4813#3802..4115#2896..3037#2429..2671#1872..2095#1488..1527#1305..1307#gcgagctcactgttgcctgcgtcgtcgtcctcggctcggctcctcccttccctcgcggatctgaggtacgcgcgcacccgacctcctcccttctccccgtcgcgttcgccttctctccattccggattctccctgggagccctagggtttgattcgggttggttttctccgcccgcgcgcgggtgctgcctgcggtgcggggcgcgaggatctgatcgggactcgtgccttccgccatcgacgcgccgcagtgacggagccgcctggtcggtcgcgccacccggaggccggatccgcagggcgctggccttgttgattcatttcgctgggtgcgtttgcctgtcggaatctctcgggttggagtccaggctcgtgttgggagtgccggtggggtttgcacgagttcttcgtagcgtctcttaattgcttagaaaatttagtttgtgcgccaccggggcgttccgtttgtctggatggtcggtttacgtgtgcagtatgaggatcgtccgatagtgtgcgtttttgcgaggagtgttgcatgccaagcagtttggttgtgagattttcttcctgtgattcagtactttgtgagtctggatctctggatatacgcacgttatgcttagaatttctgcactagttggacgttgcttaattaggaaaactagcttgagccttacgttgtttcaattaggcattgatatcatattttttctgttacgtgggtttgtattatgtgattttttttaacatggttgttataaatctatgaaagtttgtatttttttcatcacatcggatgtagtaacgtctagtggtatgctgattgatgcctatccatcatcagcaatttatgctatataaattcctaataaccagtattcccaaatatgtctgatttcatctgtgttcacgatggtcactaacttcatgcagtttttccttgttattgtgttttagtaactttgattggcctcaattggatcttgaacttttgatgcaattcaagtgtgctggtttttatttagtttatgcatcacaacagcggcagtattctctggtcattaataaagtttgttaaatcctgttggacatgtgacgcaaaagcataagaaacattgtacttattgacaaactcattatttatgttttctgtggttatgcatctgcagtgttgacaaatttattttgttcagttgtctcgcatggatcgattgctttggaactcattactttccgtcttgcagttctatatcttgtcaacttggatttggtaatccctggaactaaaaaggccattcaaaatggtatggctggtttattcgaattgctcatttgcaatgttactgtgttgtaaattgattcaggaaaggacatttagtaagggcatcacagcaaaggaatgagcattatccttgtttcattttaaactgttgcatttttttgctctattaagaagagtgattgtttcttttatacacatacaggtggttcttgcagcttctattatatcgaagtctggaaaaggtgagtttgttgaaaatttccaattcacagtatcttttgttattgatttatttattggattcacaactttctcgaacaattgacttgttggattcacaattctctaatgggatgtcctcttatattagctcttgcagcccaaaaaaggggcaatacaattttgctaacaatagcaattaacatccttttcttatacgcaagtacaccaattctatccaagtaacaacactaaaatggcttttatatgcacaagttttggtctttagaatttttgcattttgtagtctgtttatgtctacacttataatgttatgaacaagaaatttgtcattttttgatttcagctcttgtttcgagacaatttgttgacatgtcccggataaggatcgatgggctgcttgcagcatttccgaagctggtcggaagtggaaagcaacatacttatgttgagactgaaaatgttcgttatgtctatcaaccaattgaagcactgtatttgcttctcatcacaaataagcaaagtaacattcttgaagatctggatactttaaggctactctccaagcttgtatcctaccatcagttgtgctatatttctattctcaaacgctaaattatttctttaaaaaaatgtagctatttcagaaagattaaaaaaaaggctgtagctccgcattcaatagttttatcacaatgaaaaattcgaacttatattctttttggcaaggagaaaagggcagtattaagtgtaactgcagaacaacttcactttggaacaaagatcaacagagtagtcaccactaacctgataaaccctatttcttgttgctgacgacatagttagtatttgccttttgtgcataccaattcaatgcagtgatttccttgaacgtctacaaagatacctgaatatgctccctctttggatgaagagggtgtctgtaaggcagcattcgagcttctgtttgcctttattgaagccatttctcttggaaacaaagagaacgtaactgttgcacaagttaaacaatactgtgaaatggagagccatgaagaaaagctgcacaagctggttatgcaaagcaaaataaatgaaactaaggatgtcatgaggaggaaagtcactgagattgagaaaagcaaggtttgtgctacctatactcaaatatagagcatgtagttatctggttcagtgtagttacatctcagtatcacatggaaccttagatcttaaatgttgcaaactgtatctacgaacacataggaaatatatgctaaaaattaatgttgaaggcgtagtgaaccagtaactgcatagctttatttttcatctttatataagttggtaaaatctgttgaaatatgcagactgatagagggaagcctgacaagggaggatttggatccttgagaactccaaacagcttcagtgacatgggcattagaggtggtggtccagggggcgatcctatatttggtgatatggactcgttcacccacaaggccaaaggtttgtactcaaacaaatgccttacatgtggaaatggaaatattatttagcatttccttttggagtcctatcaaggaagctgactagacttgtaatattcctgtaacaataaattttcctgagcattggtaaccaaaactagtagtaaatattttatggcagttcttttagcctgttcatacatacacctaatgatttagggagagaatcatccatgcagcataagataggatttcaaccagttattttaaattatatttccgtgctcctatgatttggattaggttctacccaggatcttgatactgagttagacaacctttctttcttatgtgagacaaacaatattgtacttgtactaatgtgctttttaagtttgtcagttgtgacatgccagaaagtaatacacataactatttgccaaattgcagggcaaatgtgcatcttacacattgttcatctaacaccgtagctcataaataaaatcacttaattgtgcaatagtttgttgatttgttcgaaagtagtgatgggttctgccacaacaaaagtaccaacgaaatggctagtggttcaagaaagaaatacctgcatccacaattccacatgtattttaactcaatttattgagacctcttttgacttgagtaaagtcgattctctagggtaatggtgtggctagtggatataggatggttaattttggttggtggtgttatgactatctagatgctgttttatcttgacggctggcatatgtacaggccgcccatctgctcctgctcctgcatctgcttctactaaagttcctggtggtatgaaattaagcaaagcacagaagacaaaccagttccttgagtctttgaaagctgaaggagaagtcattttggaggacactcaaccaagtgcaactcaatcaaggtcatcatatatcccaccaagcgatcctatcacagtgacaattgaagagaagctcaatgtcactgttaaaagggatgggggagttagcaattttgatattcaaggaaccctggctctccaaattctgaatgacactgatggttttattcagttacaggttattttctatatatggtgtctggatcttttagtctgattatgcccttgtttggaatcaacacaatctattagtttgtttttaatgagaatttgcatgaagcttctgcttgcatctattaactaattgcacagctttatacaactcaaaccccatttctgaatatttgttgaaattactactgttttgaatatcttcagataattcgtaggccatgagaaccaagcttctttgagaattgttgttctgcaccgctttccataaatcagacctttgagaaccaagctcttttggtctgaacaattgcattcatcacaaattaattgttaaattcttgtttgttcctaattagattatacaagttgctatagaactcagggatttcctgacatcggcaagttaatatttacctgaatcacttacctgcaaaactcttttgactaatggtattatctaaatttagttttaatcaggagttactaaatcttcaaatatttggtgtgctcgacagattgagaaccaagatgtacctggccttaacttcaagacacaccccaatatcaacaaagagttattcaacagtcaacaaattgtgggggcaaaagatccaaacaggcctttccccagtggtcaaaatgaaacaccgttggtgaaatggagaatccaggagttgaatgagtcatctcttccattggcaggtaaaaagaactgtttgcttaaagttgtttgctaagttgcacatgtataacctggttttgccaattgcagtgaactgttggccttcggtgtccggaaatgaaacctatgtgaacattgaatatgaagcttcagagatgtttgatttgcacaatgttgtcatctctatccctctccccgcacttagggaggctccaggtgttaggcagatagacggagaatggaggtaatgtttcttggcccatgtcttgtcttaattgtctggtaccatgcataagggcagtcccaaccctccacctaggatggtgtctatggcattaactacattgccatataggacttttagcttatgtggcactatattaattaagagagagtaaagagaggaagaaactaggtctcatgcaagacacagcttcaacatgagaacctatgcactagacactatcaagttttgcattgggacagaatagtgttttcataatagatgaagaataaatatgattggtagagaagagagatgatacatttattaatggcccactttaagaaatcatgggttgtggagtgtagtttctattgtgatgtcttattgatatgacatcatagacactgtttatggacactatgggttgggactgctctaatgctattaactgttaattttgaagtttaacattgcacctaaatggaaagaaaagatcgtgcaaaagttttcattgagcatttaaagtttaggttactagtgaaaggtggagctcgttaacaaatactttttgctgccaaagaactatttggagtattggacattaactgcacgttgacaaaagtcttggtgtttatgttaacaaatagtaaatgcaaataaatatctagcctggctttgctttctcgtgttatacattgcattatagtataattagagctttagaataatttgtgatgtggctcatgtttttgtttgaaaatgatttttttatggaagtttcttctgatcacctgccaagctgatctttagctgcatagcttcattactttcattcatttattcatttcttgtctttacatccaggtatgactcaagaaattcagtgttggagtggtccattattcttgttgatcaatcaaaccgcaggtacaagaagtatatgttttctcaacattatcctcttttctagtatcgcacagttttccctccacggtgtccatgctaactttattttttcatttgaagtggttctttggagttcactgtccctgcagctgatccatcaacattcttcccgatatctgttgggttttctgcatcaaatacatttagtgatttgaaggttggttattatatcccactgtgtcatacatgcatactttctgattttccttctttaccatagttgcctgattattgagcggaccatacttacatgcatacagagcaatttgacacaatcaggcacttcaaaatatcttggaggattgaatttttcatgggcattttgctgtatcacatcatttttactagcctttcgctgagttgaaattagttgactttacagctaccattgttcatgaagctttcatggcatctttcatggtgatggttgtgtgtattctgttttgaattaataatgattcttagtcaatgaactttctgctgaaaactttgtatgtttgttgtttgaccttcccaacctcatccaactttctttagaacactaccccttgtgcgatcagatctgagaatctcgacccatggtctgtagattaaactcctttccatgcatcaagtcttttagccacttgacgcctaatttgctctgggaaggttgcatggccacccacttagcattttacaccaagtagtgggggtgtcctttcctggttttttaggaaaatggtatacatgcatttaaagatacaaaagttcagcgatatctaactctggatatctccagttctccaccattctatagtagaatgttattctaaaactgacttttaaggaacagcagttctaatcctgaaaaattagcagtttttttccctatagaataatcattgaaaatttatagcagttctaatgctgaaatttatttatgggctttcgaatgtttttttgaactgattgcattatgacactgttagcccggagaaaacagtcaggaacatagcatgccgttcctctttggcttagtcagtccaactttctatatttggtgtttttctagttgaatttatgttcttgcgttgcaaattcttgtttcaggtgaccgccatccgtccgctgagggaaggtagcccaccaaagttttctcagaggaatcgattggttacttataactaccaagtggtttgacgcgcaaattaaagttagtttgttccagtcaagtaattgcgcacatttgcagtacataggagcttctgattttctgccaagcttagatagcttgctcagtgagttgtcccgacgtggataaatatgtggtatacgtaatgcatgctgtttttcctttacactgtaaaatgttaccccaaagttatgctttttactggagtgttacagaattgttttttaagaatggaatataaaaatacgaagagttcatcct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0833700, RefSeq:Os01g0833700