Difference between revisions of "Os01g0871300"

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(Created page with "{{JaponicaGene| GeneName = Os01g0871300| Description = 1-aminocyclopropane-1-carboxylate synthase family protein| Version = NM_001051471.1 GI:115441312 GeneID:4324941| Len...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0871300|
 
GeneName = Os01g0871300|

Revision as of 19:02, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0871300

Description

1-aminocyclopropane-1-carboxylate synthase family protein

Version

NM_001051471.1 GI:115441312 GeneID:4324941

Length

3318 bp

Definition

Oryza sativa Japonica Group Os01g0871300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39535359..39538676

Sequence Coding Region

39535426..39535523,39535627..39535831,39536237..39536330,39536418..39536521,39536958..39537206
,39537294..39537407,39537598..39537681,39537880..39538050,39538132..39538245
,39538339..39538482

Expression

GEO Profiles:Os01g0871300

Genome Context

<gbrowseImage1> name=NC_008394:39535359..39538676 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39535359..39538676 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcctccacctccgccacctccttctccactcccaccaagcccgcctcctcctcctcctcctcctcaagtcccaactccgtctgcttcgccagggcgtcggggaggtgcaggatggcgtcggtggtggtgagggcggaggcggtggacgcgaccatcagcccgacggtgagcgcgctgcggccgtccaagaccatggccatcaccgaccaggccacggcgctgcggcaggctggcgtcccggtcatcggcctcgccgccggggagcccgacttcgacacgccgcacgtgattgctgaggctgggatgaatgcaattaaggatggttatacaaggtacactcctaatgctgggactttggagctgagaaaggctatctgcaataaactccaagaggaaaatgggatatcctacagtccagatcaggtgctggtgagcaatggagctaagcaatgcattacgcaagccgtacttgccgtttgctcacctggtgatgaggttttgataccagcaccatactgggtcagttatcctgagatggctacattggctggtgcaactccagtgatccttcctacaagcatatcagagaatttcttgctaaggccagagctgcttgcttcaaagatcaacgagaaatcgaggcttttgattctctgctctccttctaatccaactggatcagtatatccaaaggagctgcttgaagaaatagctgacatagtcaagaagtatcctaggcttcttgttttgtctgatgagatttatgagcatatcatctatcagccagcaaaacacacaagctttgcttcattgcctggaatgtgggatagaacattaactgtaaatggtttttctaaggcttttgcaatgacgggctggcgacttggataccttgcagccccaaaacattttgttgcagcctgtggaaagatccaaagccagtttacttcaggtgctagtagcatatcacagaaggcagggctcgctgctttgaaccttggctacgctggtggtgaagcagtctcaactatggtcaaagcattccaggaacgtcgtgattaccttgtaaaaagtttcaaggaactgccaggtgtgaagatatcagagcctcagggtgccttttatttgttcatcgacttcagctcctactatggatctgaagtagagggttttggcactatcaaggactctgagtccctctgcatgttcctcttggagaaagcacaggttgcacttgtcccgggcgatgcatttggggacgacaaatgcatccgcatgtcatatgctgcagcactatctacgcttcaaactgctatggagaaaatcaaagaagctgttgcgctgatcaaaccccgtgttgctgctaagtga</cdnaseq>

Protein Sequence

<aaseq>MAASTSATSFSTPTKPASSSSSSSSPNSVCFARASGRCRMASVV VRAEAVDATISPTVSALRPSKTMAITDQATALRQAGVPVIGLAAGEPDFDTPHVIAEA GMNAIKDGYTRYTPNAGTLELRKAICNKLQEENGISYSPDQVLVSNGAKQCITQAVLA VCSPGDEVLIPAPYWVSYPEMATLAGATPVILPTSISENFLLRPELLASKINEKSRLL ILCSPSNPTGSVYPKELLEEIADIVKKYPRLLVLSDEIYEHIIYQPAKHTSFASLPGM WDRTLTVNGFSKAFAMTGWRLGYLAAPKHFVAACGKIQSQFTSGASSISQKAGLAALN LGYAGGEAVSTMVKAFQERRDYLVKSFKELPGVKISEPQGAFYLFIDFSSYYGSEVEG FGTIKDSESLCMFLLEKAQVALVPGDAFGDDKCIRMSYAAALSTLQTAMEKIKEAVAL IKPRVAAK</aaseq>

Gene Sequence

<dnaseqindica>68..165#269..473#879..972#1060..1163#1600..1848#1936..2049#2240..2323#2522..2692#2774..2887#2981..3124#acaacaacacaaactacctaccgctgcgacacacgcagccgagctaagcgctaccaccctcccatccatggcggcctccacctccgccacctccttctccactcccaccaagcccgcctcctcctcctcctcctcctcaagtcccaactccgtctgcttcgccaggtgagcatcggcgtcgcgttggggggttggatctttgctggttctttggcggcgatcggtgacgtgatgacgtgggggggaatggattggcttgttgttgcagggcgtcggggaggtgcaggatggcgtcggtggtggtgagggcggaggcggtggacgcgaccatcagcccgacggtgagcgcgctgcggccgtccaagaccatggccatcaccgaccaggccacggcgctgcggcaggctggcgtcccggtcatcggcctcgccgccggggagcccgacttcgacacgccgcacgtgattgctgaggtaggtgccttttttttttcttcgtctcggtagaaaatttagccccgggtaggggaatatcatcatgatatgtttatccaagttgtgggttataaggattaaaagggattgattaacattaattgctactatcagttcttgttgtgtgttgttcttagttgtgaattcattgcactagtaagtctgcaaaagctcaaatgcttgtgaacttgaacttgaacttgaattggccaattttgggggactctgaatgctgtgcgctcaattttggttatgaaagtgtaggaatgtttattatttgcttgcaactaatactgcagtagtgcacttgttcttaggcaaaagaacgaattctgttggtagcaagttgagtgttgatcgctcttgttgcttgttgtgatctaggctgggatgaatgcaattaaggatggttatacaaggtacactcctaatgctgggactttggagctgagaaaggctatctgcaataaactccaaggtgcgtggatgaatttcttgtttgcagacctactaccttagttcaaaagaagatttgagtaactttgtttgactaataaatgtgcagaggaaaatgggatatcctacagtccagatcaggtgctggtgagcaatggagctaagcaatgcattacgcaagccgtacttgccgtttgctcacctggtgatgaggtttggcctctgtcttgctaatgctagttgctacgctgcgatgtattgaacatctatagtatctaggagaacaaaaacacaaatctcattagttcctttatatttctttggagatcatggggacctttctatacgctacgatgtcttgattgttcattacagaaagtacatcattgataatttgctttttggttttgtcagatatgacgtattattacctgtatcgtttaatgccatgtgttgttgttgaccgtcttgtttaatgccattagaattatttgtatcagataaatgcaatcattccattagaacttaatattagatgctgccactgaagtttgtgctgctaaagctgttactcctttgtttatgtttattgtgcttcaaattgcactatcatctgttttaacaatattgagggatccctttcttttaggttttgataccagcaccatactgggtcagttatcctgagatggctacattggctggtgcaactccagtgatccttcctacaagcatatcagagaatttcttgctaaggccagagctgcttgcttcaaagatcaacgagaaatcgaggcttttgattctctgctctccttctaatccaactggatcagtatatccaaaggagctgcttgaagaaatagctgacatagtcaagaagtatcctaggcttcttgtaagtgttttagtttccccctttctttaaccagtttacattttcaccgcatgatgattatggcctatcatcttgtctgtctttcaggttttgtctgatgagatttatgagcatatcatctatcagccagcaaaacacacaagctttgcttcattgcctggaatgtgggatagaacattaactgtaaatggtttttctaaggtagatatgcttctgtttatttctgttcactctttaaaatatgtcgggcacctctttagctatatgtggattttcacaatctgaaatgtaatatcttaatgaacatagcaaggagtctgcctatttcagtttttacctacccactgggtttagaaagctggctgaatatttgctgatgcaaattttacaggcttttgcaatgacgggctggcgacttggataccttgcagccccaaaacattttgttgcagcctgtggaaagatccaaagccaggtgatcacttcttgttcatgcaactataaatgtgtagtgttgagtgatgtagtcatgtgatactgcattatcatagaactatcactttgttaattctagaaaacttcacgtgccgcaacattatctgttctagcccccttttccttctgcaaactctgatttgcagttgtcctcacaccaacgctttgtttgctgcagtttacttcaggtgctagtagcatatcacagaaggcagggctcgctgctttgaaccttggctacgctggtggtgaagcagtctcaactatggtcaaagcattccaggaacgtcgtgattaccttgtaaaaagtttcaaggaactgccaggtgtgaagatatcagagcctcaggtgagaattgataagatccagtagttctgctaaatcctagttgcataccccagacagatggctaaacatccaaatttgtagggtgccttttatttgttcatcgacttcagctcctactatggatctgaagtagagggttttggcactatcaaggactctgagtccctctgcatgttcctcttggagaaagcacaggtatgaatacagatttcattcgcatttttcagtgaagtttactgacacagtaaaactattactaaccgcaatttatcgattgcgctattataggttgcacttgtcccgggcgatgcatttggggacgacaaatgcatccgcatgtcatatgctgcagcactatctacgcttcaaactgctatggagaaaatcaaagaagctgttgcgctgatcaaaccccgtgttgctgctaagtgaaaatgtgaggttatacaatggcagtggggagtgaccaaaggcgccttcaactgccacttcggtaccatttgaaatacaaacgatgtgtcattgtctgacaagtaagaatttttgttgtttgattgtgtctgctgtgataaagaacttgaatgtaactccgggaaaatggataatacttcttgatttctttttct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0871300, RefSeq:Os01g0871300