Difference between revisions of "Os01g0872000"

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(Created page with "{{JaponicaGene| GeneName = Os01g0872000| Description = TGF-beta receptor, type I/II extracellular region family protein| Version = NM_001051477.1 GI:115441324 GeneID:432494...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0872000|
 
GeneName = Os01g0872000|

Revision as of 19:02, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0872000

Description

TGF-beta receptor, type I/II extracellular region family protein

Version

NM_001051477.1 GI:115441324 GeneID:4324947

Length

2103 bp

Definition

Oryza sativa Japonica Group Os01g0872000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:39570520..39572622

Sequence Coding Region

39570542..39570638,39570749..39570966,39571070..39571599,39571695..39572463

Expression

GEO Profiles:Os01g0872000

Genome Context

<gbrowseImage1> name=NC_008394:39570520..39572622 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:39570520..39572622 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtccggtgggctaatcgcgccatccgagacatgttcgtccgacggtcgtggcggcggcggcggcggctggcgcgccgcgcgcttcctcatcgccgtcgggttcctggagcgcatcgggttcaacggcgtgcagggcaatctggtgatgtacctgaccgggccgatgggcatgtcgacggcggcggcggccgccggcgccaacgcctggggcgggaccgtgctggtgctgacgctcgtcggcgcgctcgccgccgactcgcgcctcgggcggtaccgcgccatcgtggccgccggcgtgctccatctcctgagtttgggaatgctgacgatctcatcagtgatgcaaccaaatcatcctcacccggcgagctgccatgacgcagccgccgcctgctcgccgtcgccgccgccgccgccatctctcgcccgcctcgtcttcttccacgccgcgctctacctgctagcgctggcgcagggcttccacaacccgtgctccgaagccttcggcgccgaccagttcgcggcgagcgaccccggcgcgcgcgcgtcccggagctcctacttcaactggtaccagttcttcaattccttcggctatggcatctccaacaccgcgctcagctacgtcgaggacagcgtcagctgcaccgtcgggttcgccgtgtgcttggccacgacggcggtgtacctccccatcttcttgctcggcacgcgggcgtaccgcgccgagcaacccgtcgacggcgccctgctcgcgcgcctcgccaagacgtcctcctcggcggcgcgtgcgtggacggcgagggtgtttcgccggaaggatacctcttgcacagaacggcttctggcgagggaagaggtaggcgagaaggggttccttgccaagttgcttccgatctgggtgaccagcatagtgttcgccatcgtcagcgcgcaagaggtcaccctgttcatcaagcagggcagcacaatggaccggcgcatcggcgcgcgcgggggcctcgtcgtgccgcccgctgctctgcagtccattgtcagcgtcatcttcctcaccttcgtgccggtctacgaccgcgccctcgtgccgctcgcgaggcgcttcacggggcaccccgcgggcatcaccacgctccagcgcgtcggcgtcggcatggccatgtcctgcctcgccatggccgtggcggcgctcgtcgaggccaaacggctccgcgccgcgagcgacgccggcctgatcgaccggccggacgcgacggtgccgatgggcgtgtggtggctggtgccgcagtacgccctcgtcggcctatcgaaggtgttcggcatcatcgggctcgacgagttcttctacgaccaggtgcccgacgacctgcgcagcgtcgggctcgccatgtccctgagcgtgcgcggcgtcgggagctacgctagcggcgtgctcgtgtcggcgatcgactgcgcgacgaggagcgggggagagagctggttctccgacaacctcaaccgcgcgcacctcgactacttctactggatcctcgccgcgctcgccgctttggaggtcgccgtgttcgtctacatcgcgaagcgatacgtctacaagaacaaaggcgagccatga</cdnaseq>

Protein Sequence

<aaseq>MESGGLIAPSETCSSDGRGGGGGGWRAARFLIAVGFLERIGFNG VQGNLVMYLTGPMGMSTAAAAAGANAWGGTVLVLTLVGALAADSRLGRYRAIVAAGVL HLLSLGMLTISSVMQPNHPHPASCHDAAAACSPSPPPPPSLARLVFFHAALYLLALAQ GFHNPCSEAFGADQFAASDPGARASRSSYFNWYQFFNSFGYGISNTALSYVEDSVSCT VGFAVCLATTAVYLPIFLLGTRAYRAEQPVDGALLARLAKTSSSAARAWTARVFRRKD TSCTERLLAREEVGEKGFLAKLLPIWVTSIVFAIVSAQEVTLFIKQGSTMDRRIGARG GLVVPPAALQSIVSVIFLTFVPVYDRALVPLARRFTGHPAGITTLQRVGVGMAMSCLA MAVAALVEAKRLRAASDAGLIDRPDATVPMGVWWLVPQYALVGLSKVFGIIGLDEFFY DQVPDDLRSVGLAMSLSVRGVGSYASGVLVSAIDCATRSGGESWFSDNLNRAHLDYFY WILAALAALEVAVFVYIAKRYVYKNKGEP</aaseq>

Gene Sequence

<dnaseqindica>23..119#230..447#551..1080#1176..1944#ggggtaccgcactgtggcagccatggagtccggtgggctaatcgcgccatccgagacatgttcgtccgacggtcgtggcggcggcggcggcggctggcgcgccgcgcgcttcctcatcggtaacgtcgtcgctgacctctcgctgtactcgcgcgcgtccctgcgccgcgcgcaggtcgatcgattctttgcctcgcctgagcgtttctcggattcatggatgccgcagccgtcgggttcctggagcgcatcgggttcaacggcgtgcagggcaatctggtgatgtacctgaccgggccgatgggcatgtcgacggcggcggcggccgccggcgccaacgcctggggcgggaccgtgctggtgctgacgctcgtcggcgcgctcgccgccgactcgcgcctcgggcggtaccgcgccatcgtggccgccggcgtgctccatctcctggtcagttcgatcttccgcttctctcgatctgtacctgtcgaacaactctgtcatcggatgatcgagttcatcgatgttccaacaaagagtcgcaattttacagagtttgggaatgctgacgatctcatcagtgatgcaaccaaatcatcctcacccggcgagctgccatgacgcagccgccgcctgctcgccgtcgccgccgccgccgccatctctcgcccgcctcgtcttcttccacgccgcgctctacctgctagcgctggcgcagggcttccacaacccgtgctccgaagccttcggcgccgaccagttcgcggcgagcgaccccggcgcgcgcgcgtcccggagctcctacttcaactggtaccagttcttcaattccttcggctatggcatctccaacaccgcgctcagctacgtcgaggacagcgtcagctgcaccgtcgggttcgccgtgtgcttggccacgacggcggtgtacctccccatcttcttgctcggcacgcgggcgtaccgcgccgagcaacccgtcgacggcgccctgctcgcgcgcctcgccaagacgtcctcctcggcggcgcgtgcgtggacggcgagggtgtttcgccggaaggatacctcttgcacagaacggtgagctcgccgcgccagcgaaagcaaaacgtgcgttcttgatgagttgatctgataaccttcctaatggcgaatgttttacactaatcgtgcaggcttctggcgagggaagaggtaggcgagaaggggttccttgccaagttgcttccgatctgggtgaccagcatagtgttcgccatcgtcagcgcgcaagaggtcaccctgttcatcaagcagggcagcacaatggaccggcgcatcggcgcgcgcgggggcctcgtcgtgccgcccgctgctctgcagtccattgtcagcgtcatcttcctcaccttcgtgccggtctacgaccgcgccctcgtgccgctcgcgaggcgcttcacggggcaccccgcgggcatcaccacgctccagcgcgtcggcgtcggcatggccatgtcctgcctcgccatggccgtggcggcgctcgtcgaggccaaacggctccgcgccgcgagcgacgccggcctgatcgaccggccggacgcgacggtgccgatgggcgtgtggtggctggtgccgcagtacgccctcgtcggcctatcgaaggtgttcggcatcatcgggctcgacgagttcttctacgaccaggtgcccgacgacctgcgcagcgtcgggctcgccatgtccctgagcgtgcgcggcgtcgggagctacgctagcggcgtgctcgtgtcggcgatcgactgcgcgacgaggagcgggggagagagctggttctccgacaacctcaaccgcgcgcacctcgactacttctactggatcctcgccgcgctcgccgctttggaggtcgccgtgttcgtctacatcgcgaagcgatacgtctacaagaacaaaggcgagccatgattcttccgagttcggattagagtgtgtaataagtctgaaaaatggtccacatgctcaaagatgtgtactctttcccgtttcataattcttacattttacataaggttaaggttaaacttttataactttaattatcaataactttaaagtatttagttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0872000, RefSeq:Os01g0872000