Difference between revisions of "Os01g0884500"
(Created page with "{{JaponicaGene|
GeneName = Os01g0884500|
Description = Zinc finger, FYVE/PHD-type domain containing protein|
Version = NM_001051553.1 GI:115441476 GeneID:4325008|
Length =...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os01g0884500| | GeneName = Os01g0884500| | ||
Revision as of 19:03, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os01g0884500 |
|---|---|
| Description |
Zinc finger, FYVE/PHD-type domain containing protein |
| Version |
NM_001051553.1 GI:115441476 GeneID:4325008 |
| Length |
11377 bp |
| Definition |
Oryza sativa Japonica Group Os01g0884500, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:40169028..40180404 |
| Sequence Coding Region |
40169328..40169845,40170069..40170140,40170897..40170953,40171064..40171120,40171231..40171287 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:40169028..40180404 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:40169028..40180404 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggggaggaggagcaagcagaaggtggaggatatggccgaggagctctgcttcgtctgcaaggacggcggcgacatccgcgtttgcgacttcaagaactgcctcaagggttatcatccacactgtgtggggaaggaggaaagcttccttgattctgccgaacagttcatttgtgaattgcacaaatgtgttagctgcaaaaggaattcagaatatcattgtttgtgttgtccaagttcctctgtatgcggtgaatgccttggaaaagttgaatttgcacaatttaggaagcagagccagaccaaaggattatgcaataactgtttaaagttggcattgtttgttgagaagaactctgaagctaattctgatggggaaacagttgaattcagatatacggagaactatcttgttctgtttaaagactactgggaaactattaaagacaatgaaggcttggcattgattgatttgcagcaagccaatatttgtcttagaacaagcttaagctgtaaacaaggaagggattcagagaaacccccagatgaagattacagggcagataagaattcattgagtgttaatgatggcgctgaacaaccattcccggttgatgtaaaggtccaaccaagtgaagcaaaaatgtcactgaagagaaagaagtcaaacaagaaaacatatgtcggttggggttcaaaagagctaattgaattcctgtcatgtattggcaaggatacaactaaacctcttgatgaatttatacttactggagttgttaaggagtacatccagcagaagaatctattcaaggacaggaaaagaaaatctgtcatttgtgatgataagcttcattctttgttcaggaaaagaaaagtgaagtcaaatatgattcttaacttgctggaaatacatcttgcggcaaatgctgcttcagaggatgattttctcgatgattctgaggatgatgaaggccgaattatgagaaaaaggccttgtaatactttaaaggcggcagagacttctgagagggatccaaagagaaacaagaaatgctttgcagctcttaatcacaataacttaaagttaatttatttgagaagaactctaattatgaatcttatgggccaagacacatttgaacagaaagttgttggaagtttggttagagtcaagaatgatgacaatcattatagttatcagatgcctaaaaaacactaccagcttggcctagtaacaggcattaggaaatctccacaagaatacaagataaaggacaaacgtacagatattcttttatgtgtttccaatctgtgggatgacatcaagatctccatgttgtctgaagaggacatagaggaggacgagtgtaatgatctccttctgttggctaaaaaaggactcttcaaaagacctactgttgctgatttagaagagaaagctgcaagtatacatgtggacatcgtgaatcattggattgatagagaacttatgagactggaaaaggagatcgaaagagcacatgagaagggttggcgccaagaattgcatgaactatttaataaaaaaagacttctaagcacacaagacgaaagacaacgtcgtcttgcagaggtcccagaagctattccagatacagaagagagtaaaagggatgaatttggagttgctgcaagcaaccatcttgaagaaaacaaaggtgcaacagggcatgtacctaattctgtgaaagttctaatggaggattcacgaggtgcaacagggcatatagctgattctgtgaaagtacttatggagggtttaccaggaggtgcaacagcacgagtagctgatgttttcaatgttgatatggctaaatcacaagatgcatcagggcaagtaactgattacttggaggttgttgaagaggaaactccagaagatgcatcaggacaagtagctgatatcttggacgttgttgaagaggaacctccagaagatgcatcaggacaagtagctgatatcttggagcttgttgaagaggaaacttcagaagatgcatcaggacaagtagctagtatcttggaggttgttgaagaggaaactccagaagcacctggtaaagacctttgtaatggtggcattcctgggtctggactacaaaacaaaatgcacaatgctcaagatggtggcacggctcaaggcagcgatatgtgcaatggcggaaatacctcaaggcgtctcaatgatcgcaagagtgttatcgttatcgactcagacagcgatgaagacgaggatcctcacccagagcaacatgaaccagaacgtgctgctcctcgggcagccatggacgtggtcatggctcccactcatggtgctccggtagccatgaatgggactagtgctcccactcttccttgtgctaagagaggcaagaacgggactaccgcgcctaaaggccgtgttccggctatcgctgcacttcacgcactgcaatccatgaatgcgccaggtgagcatgaatacatatggaattacgcggatcctcaggggaaagtgcaagggccattcacaatggagcatatgcggaactggcaccggaatcgtttcttccctccggacttcagggtgtggagattaggccagacacagaatgattccgtcctgctaacagaggccatgggcctgaaattttcttcttga</cdnaseq> |
| Protein Sequence |
<aaseq>MGRRSKQKVEDMAEELCFVCKDGGDIRVCDFKNCLKGYHPHCVG KEESFLDSAEQFICELHKCVSCKRNSEYHCLCCPSSSVCGECLGKVEFAQFRKQSQTK GLCNNCLKLALFVEKNSEANSDGETVEFRYTENYLVLFKDYWETIKDNEGLALIDLQQ ANICLRTSLSCKQGRDSEKPPDEDYRADKNSLSVNDGAEQPFPVDVKVQPSEAKMSLK RKKSNKKTYVGWGSKELIEFLSCIGKDTTKPLDEFILTGVVKEYIQQKNLFKDRKRKS VICDDKLHSLFRKRKVKSNMILNLLEIHLAANAASEDDFLDDSEDDEGRIMRKRPCNT LKAAETSERDPKRNKKCFAALNHNNLKLIYLRRTLIMNLMGQDTFEQKVVGSLVRVKN DDNHYSYQMPKKHYQLGLVTGIRKSPQEYKIKDKRTDILLCVSNLWDDIKISMLSEED IEEDECNDLLLLAKKGLFKRPTVADLEEKAASIHVDIVNHWIDRELMRLEKEIERAHE KGWRQELHELFNKKRLLSTQDERQRRLAEVPEAIPDTEESKRDEFGVAASNHLEENKG ATGHVPNSVKVLMEDSRGATGHIADSVKVLMEGLPGGATARVADVFNVDMAKSQDASG QVTDYLEVVEEETPEDASGQVADILDVVEEEPPEDASGQVADILELVEEETSEDASGQ VASILEVVEEETPEAPGKDLCNGGIPGSGLQNKMHNAQDGGTAQGSDMCNGGNTSRRL NDRKSVIVIDSDSDEDEDPHPEQHEPERAAPRAAMDVVMAPTHGAPVAMNGTSAPTLP CAKRGKNGTTAPKGRVPAIAALHALQSMNAPGEHEYIWNYADPQGKVQGPFTMEHMRN WHRNRFFPPDFRVWRLGQTQNDSVLLTEAMGLKFSS</aaseq> |
| Gene Sequence |
<dnaseqindica>10560..11077#10265..10336#9452..9508#9285..9341#9118..9174#8952..9008#8393..8446#8017..8073#7741..7794#5117..5269#4819..4891#4237..4287#3624..3683#3056..3177#1923..2784#1150..1349#579..658#198..292#gcgcctcgatcctcgcctcctccccgcattcactcccccgaaaccctcgctctctcccccatccgccgccgcggccgcaaacgacggcggcggcgaggttcgtcggcggggattgtgggggggggggagaagacgacgagggttttttttttattttttttttctgattatccccctcgcgcggggggttttgggcgatggggaggaggagcaagcagaaggtggaggatatggccgaggagctctgcttcgtctgcaaggacggcggcgacatccgcgtttgcgacttcaagtgagcttcgcctcctcccccctcctcactatttttttttggttcggttcgtggttttgtgctgtcgctatctcctctgttggaaaaaaaatggttggaattgaggtttgttctgttggggggaatgtgtgcaatgcgggtttttggtagatggtgggtgcagtggctgctgcatgcagaattcagttctgtggtgcccttggaagttggaacagtatcgtcgggatcatttccaatcgattggtgacagtgtagctagctaattgtgccttgttatgcttttcaggaactgcctcaagggttatcatccacactgtgtggggaaggaggaaagcttccttgattctgccgaacagttcatttgtggtgagcgccttttgtttttttcccccagtatttcaaccatacttagctgctatctgaattagcacgacattgcaatacccattatgctgcctgcccatgtttggttacctcattcatttggtttgaccaagtatcctaaatcatgtcctgcctttgtggaattgccaatgcccctttctttttcctagaaaaaaaaatcggctgctggatgcttaacctttcatttattagtagtgaatgggcttcagtatcttggacaaaaaacttgggaggattaattgctcagtagtttttatgtagcatagacataactaaaaggaaggtgtttagcatataatctgtcagaaataagctgcaaagtacttttgtgagctagcagtactatgcattttttggatttcatttttctgttcttggagtgcctctttcaacttctaccatgtggtacaataatgctattcattcttgagcctaacttttactatttgcagaattgcacaaatgtgttagctgcaaaaggaattcagaatatcattgtttgtgttgtccaagttcctctgtatgcggtgaatgccttggaaaagttgaatttgcacaatttaggaagcagagccagaccaaaggattatgcaataactgtttaaagttggcattgtttgttgagaagaactctgaagctaattctgatggggtaagtgcatgtggatccttttacagtttttgaattatagcatttattttccatttttctggaggtagtactccctccatccaaaagtcttgagcctttttcatttcctggtttttccaaatgagatagacatatttgtagtctccatgcatctgaggcttaagtgaaggggttgttttattgttttacagtgctaaattaaattgttgagtggaacccaagcaaccaccttaatacttattggttgcatgcacatatagtttcttcgtctttgttacatgaggatgagttaatttctccttggtcttgatgacaaaagaaatatgccttagacctttggatggagggttaagcttccaccaatcccctgccactccatgcctgccattagtcaatccttgaaaaaaaattcaatggcctagtacagtagtgcctaccataggtccattaaccttgtatttatctgtttattgttcctctggcataatttgtctgggtagtttccacaaaaatgtcagttgacctctccatatatctggtctttttctgattactgttcatgtgcatccctaggaaacagttgaattcagatatacggagaactatcttgttctgtttaaagactactgggaaactattaaagacaatgaaggcttggcattgattgatttgcagcaagccaatatttgtcttagaacaagcttaagctgtaaacaaggaagggattcagagaaacccccagatgaagattacagggcagataagaattcattgagtgttaatgatggcgctgaacaaccattcccggttgatgtaaaggtccaaccaagtgaagcaaaaatgtcactgaagagaaagaagtcaaacaagaaaacatatgtcggttggggttcaaaagagctaattgaattcctgtcatgtattggcaaggatacaactaaacctcttgatgaatttatacttactggagttgttaaggagtacatccagcagaagaatctattcaaggacaggaaaagaaaatctgtcatttgtgatgataagcttcattctttgttcaggaaaagaaaagtgaagtcaaatatgattcttaacttgctggaaatacatcttgcggcaaatgctgcttcagaggatgattttctcgatgattctgaggatgatgaaggccgaattatgagaaaaaggccttgtaatactttaaaggcggcagagacttctgagagggatccaaagagaaacaagaaatgctttgcagctcttaatcacaataacttaaagttaatttatttgagaagaactctaattatgaatcttatgggccaagacacatttgaacagaaagttgttggaagtttggttagagtcaagaatgatgacaatcattatagttatcagatgcctaaaaaacactaccagcttggcctagtaacaggtaatcaactacaggcagtcttctcaagttttgaactttgatggtttctgtaatttttgtcaggcatgtatagcatatctgtagtattgcagtggaagaccaaatcatcttttttcttcattaaccagcaagccaaaaattattttgttttcttttagatgaaaaccattttagtgctacattcatatttcatgcattggcctatatgctgtactatctatcctccaggaaggatatgactttctcaccatgttgaaaacatccataacaggcattaggaaatctccacaagaatacaagataaaggacaaacgtacagatattcttttatgtgtttccaatctgtgggatgacatcaagatctccatgttgtctgaagaggacatagaggaggtatgattcttttcctagtgtactgatataaaatggaatgagtactaccattatgatcaagtaggccgttattactcccatttgatactataatgtaacacacataccaagaaatcttaactttgaagtaatatggagtattttataatcaaaccatgatttcctattttgtgagttattcttatggtccttgggaggtactagtacctcttggtgcctcccaagaaccaccgaaaaaagaaactgcccgattcgatgtcgtagtagcatgcgcatctagcaaggataagcaaagtctactcttttgaatattattagtgtgccagactaatatcgggacagaggaagtgtcttactttctttattctacattgttctgtccactcaaaatatttccctgaatagttgatgtggtcaaacacttccttttgcgctcttgataacaggacgagtgtaatgatctccttctgttggctaaaaaaggactcttcaaaagacctactgttgtaagttcatgttatgaaaagcttccttttcctagttgcagtccccgacagcagcaatgatatattctgtgatgtatatttacatatataactttagtgatgaaataatatattgttttctgggattgtttttaacagtggagacatccttgttgatgttcatgctgatgtgcatgccatgttgggtggatctctttttatatagtaatatagccctctcaacctgctgctacttaacttatgcatgttggtctgtctgagtcgctgaatgtgcatgtgtaatacgaactgcatgtctacttttatacatgtaaccactaaccacttaatttgggtcttattgtgttgcctggacttgtgcattcacacttacatggctaaaacatttatcttctatgtgagtcagcttatttacttcagttttcacttattagtttctgtgagctaaaaaaaacaacaacagtttattcagtttctcgttttttcttgagcaccgtgcagttgtgcatttctaaactcctcttttactgctctgggtctggatttttgataggctgatttagaagagaaagctgcaagtatacatgtggacatcgtgaatcatgtaagtgaactctgaattgatttccgtggaattttattatgctttatttttgagtttagaaatggaaagctcaataacaaattggttgtctgaggcaattttaaaagagcggaagtggctttacatcttattgactgccctagtgaatgactcagcaagagatccttaacttcctatctttagttcttaactacaaaataaataccctatataattgacattagcttgttttcaaacttgtgacctattttaaattattgcccttttgataaaaatatgttttgcacttatattttggtttgatacttaagtattgtctatatcctaatcttgttctgcagtaggtcgaggtactgtctgttcccttctctggaaataatcttgatgtttgactccttatgctatcttcattccaaattaaatttcttaattttagacacagtttgaaacctgaaagcaaattgttatagcaaactaaatacttttgtggttcctacaata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