Difference between revisions of "Os01g0892600"

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(Created page with "{{JaponicaGene| GeneName = Os01g0892600| Description = Pectinacetylesterase family protein| Version = NM_001051597.1 GI:115441564 GeneID:4324955| Length = 3095 bp| Defini...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0892600|
 
GeneName = Os01g0892600|

Revision as of 19:03, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0892600

Description

Pectinacetylesterase family protein

Version

NM_001051597.1 GI:115441564 GeneID:4324955

Length

3095 bp

Definition

Oryza sativa Japonica Group Os01g0892600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:40567966..40571060

Sequence Coding Region

40568197..40568307,40568460..40568605,40568703..40568808,40568935..40569012,40569270..40569323
,40569585..40569645,40569724..40569848,40570029..40570118,40570223..40570302
,40570425..40570551,40570664..40570746,40570897..40571026

Expression

GEO Profiles:Os01g0892600

Genome Context

<gbrowseImage1> name=NC_008394:40567966..40571060 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:40567966..40571060 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcgaccagcggcaagctccggccgcccttccggcttctcctcctgctcctggccgccgccgtcgcccgctcggtggacggcgtcgagctgaccctcctcaccggcgctcgagagaagggcgccgtgtgcttggatgggagcccgccgggctaccacctgcagagaggcttcggctctggagagcacagctggtttatccatcttcagggaggagcctggtgcaacaccatcgaagattgttccaaacgcaaaatgagcgcgtatggttcatcgaaattcatgcgagcagtagagttcaacgggatactcagcaatgaccaacaactgaattctgatttttacaactggaacagagttttcataagatactgcgatggagcatcgttttctggggatggggaggctcaagatcaggatgggagcacactccacttcagaggattgcgcatctgggaagcagttattaatgagctaatgggaaaaggacttgcaactgctaaacaggccatactctcaggttgctctgctggtggtctggctgcactactacactgcaatgatttttatgcaagattttctaaggaggtttcagctaaatgccttcctgatgctggatttttccttgatattgaggatttatccggggagaggcacatgtggtctgtattcaatggaactgttcatcttcagaatgttacacaggttttgtcaaaggactgtcttgcaaagaaggatccaacagagtgcttctttcctgctgagcttgttaagagcatcaccgctcccacgcttattctgaactctgcttatgattcttggcagatacaaaatgcccttgcgccagatggatcctttcctggacagtcatggtccagttgcaaaactgacattcgaaattgtagttccacacaaatccaagtattcaatggattcaggaataaatttgtcgatgacatagaggttgtgaaagacaaaaaggactggggtcttttcattgattcatgtttcactcactgtcaaacgccattcgacatctcatggaactcacaggcctccccagttctcggtaacaagattgtcgcggaggctattggggattggtatttcgagagaagctatgaagtgaaagaaatcgactgcgagtatccgtgtaaccccacatgtagcagccagctgcctaaatga</cdnaseq>

Protein Sequence

<aaseq>MAATSGKLRPPFRLLLLLLAAAVARSVDGVELTLLTGAREKGAV CLDGSPPGYHLQRGFGSGEHSWFIHLQGGAWCNTIEDCSKRKMSAYGSSKFMRAVEFN GILSNDQQLNSDFYNWNRVFIRYCDGASFSGDGEAQDQDGSTLHFRGLRIWEAVINEL MGKGLATAKQAILSGCSAGGLAALLHCNDFYARFSKEVSAKCLPDAGFFLDIEDLSGE RHMWSVFNGTVHLQNVTQVLSKDCLAKKDPTECFFPAELVKSITAPTLILNSAYDSWQ IQNALAPDGSFPGQSWSSCKTDIRNCSSTQIQVFNGFRNKFVDDIEVVKDKKDWGLFI DSCFTHCQTPFDISWNSQASPVLGNKIVAEAIGDWYFERSYEVKEIDCEYPCNPTCSS QLPK</aaseq>

Gene Sequence

<dnaseqindica>2754..2864#2456..2601#2253..2358#2049..2126#1738..1791#1416..1476#1213..1337#943..1032#759..838#510..636#315..397#35..164#atgtactcctggccacacacggcctgcgcgtgacatggcagcgaccagcggcaagctccggccgcccttccggcttctcctcctgctcctggccgccgccgtcgcccgctcggtggacggcgtcgagctgaccctcctcaccggcgctcgagagaagggcgccggtatccatccatccatccatccaactagctagtagtagctactgctgctatcctggagtgatcatgaactggttcttgtcttcttgatcatgacatgaacgaactcaactcatcgtgccatatgaattgtgtttgtttgcattcttgcagtgtgcttggatgggagcccgccgggctaccacctgcagagaggcttcggctctggagagcacagctggtttatccatcttcaggtgatcatccatcgcagatgattgctttgtgttcatggttgctgtcaaccattgtttttcggtgggtgcatgcatgacggaatgattttctgtttgtgctgaaaatgctcagggaggagcctggtgcaacaccatcgaagattgttccaaacgcaaaatgagcgcgtatggttcatcgaaattcatgcgagcagtagagttcaacgggatactcagcaatgaccaacaactgaattctggtacatatagatgacagatggttccttaagtccttaaatttgttattcaaaaagcttttattttactaacggtttgaaggccatttgatgtccttttactaattccaaccattgtttattagatttttacaactggaacagagttttcataagatactgcgatggagcatcgttttctggggatggggaggctcaagatcaggttacattcgttttttttttttctgaaattgatttttggggttgctgtctttgtttgtattcccaaaaggtaaattctatccaacattattggcaacggtgtaggatgggagcacactccacttcagaggattgcgcatctgggaagcagttattaatgagctaatgggaaaaggacttgcaactgctaaacaggttacacgtcgtaatttttctttttactctttctgatcaagagtcattcatgattcattggcactctgatcaagaaccatgtcaaagagtcattcgtttggacaagaatcattcgtgcttcattggcactctgatcaagaaccatgtcaacgaatttcatttttctagtacacatttcaggccatactctcaggttgctctgctggtggtctggctgcactactacactgcaatgatttttatgcaagattttctaaggaggtttcagctaaatgccttcctgatgctggatttttccttgatatgtaagcctcttgaaattaattaatagtataacccactggcattgtatacttgtactcaagtgccagtttctgctccagtgaggatttatccggggagaggcacatgtggtctgtattcaatggaactgttcatcttcaggtaagctgttgaacatagtgaaacctagaaaaaatgctattttttgtaaatcttggaagggagctcgtcaatttattccaaatgttttggtggtttgttcctttctgtgcttatgaatactacctcagtgagatctggcaactgttgtccttttcttttcaagtgattctatcatgccagcttgcccgtttgtctcatctgatcgttccatattcagctttacaatcttactcagttattttttttggaaatttatcccagaatgttacacaggttttgtcaaaggactgtcttgcaaagaaggatccaacagaggtatatacctactgtattctgtattccataacagatatctccttattgtggtgctagttccttttagattatttattggattgtttaaacgaattattttctcaaaaaaatcttcggttatcttgcttagaccacttgttttaaattatgtattaagtttattcattaaaatatttaatttatctccgtaattgaataaataatccaacaattcgtttaataatctgtttaatttactgacatattgttgttctcagtgcttctttcctgctgagcttgttaagagcatcaccgctcccacgcttattctgaactctgcttatgattcttggcaggtaatttttttttcttgaataatatatagttcctttttttcctgcaaaaaaacaattaacattttttccagatgaaatcaacggataaaatcctctcactgttttagctatgattataatctgtagatacaaaatgcccttgcgccagatggatcctttcctggacagtcatggtccagttgcaaaactgacattcgaaattgtagttccacacaaatccaagtattcaatggttggtttaagcttgtcaatctgtttcggtttatttggtaactatcctgtttttttaactcaaaagttcattattcttttccttcttcatattgtaggattcaggaataaatttgtcgatgacatagaggttgtgaaagacaaaaaggactggggtcttttcattgattcatgtttcactcactgtcaaacgccattcgacatctcatggaactcacaggcctccccagttctcggtaacaaggtgaggttaaaatcactcaactgtcctaaagttcagaacagaaaatcactgaactgtacgactgtaaaagagtagctaaagttggtttatctctgataatggtagtgttctagatggattgatatttttctatttgcacttgtgtggagcagattgtcgcggaggctattggggattggtatttcgagagaagctatgaagtgaaagaaatcgactgcgagtatccgtgtaaccccacatgtagcagccagctgcctaaatgattttacattgggctggacccagactaccacccttccctgaatatttatgcaggcttatttgatgaagcagcagctgcagatcatctttcaccatttgttctgtgaacaactaatagccatgctttgctgataatcagacgcctgtaataagtcaaacagtggccatctcgggtgaaaaggaattactacgaatacttcatatttcagtacatcggctgcatattcttctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0892600, RefSeq:Os01g0892600