Difference between revisions of "Os01g0921200"

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(Created page with "{{JaponicaGene| GeneName = Os01g0921200| Description = Similar to Alpha-glucosidase I| Version = NM_001051760.2 GI:297598204 GeneID:4327748| Length = 8576 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0921200|
 
GeneName = Os01g0921200|

Revision as of 19:04, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0921200

Description

Similar to Alpha-glucosidase I

Version

NM_001051760.2 GI:297598204 GeneID:4327748

Length

8576 bp

Definition

Oryza sativa Japonica Group Os01g0921200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:41976801..41985376

Sequence Coding Region

41976801..41977151,41977608..41977681,41978032..41978283,41978515..41978689,41978831..41978917
,41979033..41979101,41979226..41979322,41979598..41979680,41979961..41980068
,41980206..41980381,41980509..41980616,41980709..41980782,41981080..41981205
,41982243..41982310,41982518..41982667,41982752..41982802,41983266..41983322
,41983412..41983558,41983652..41983743,41984104..41984213,41984316..41984379
,41984471..41984620,41985142..41985376

Expression

GEO Profiles:Os01g0921200

Genome Context

<gbrowseImage1> name=NC_008394:41976801..41985376 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:41976801..41985376 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagcggcggcggcggcagcagcagtgtccggcgacccgtagccgccgccaggagccgctcaggtccagagccggacgcgcgccgggcggccgccgccgccgccgccgccgccgcagcagcagcgcggcgccgtggccgcggcgaccatggccccctgcggctcatggaggtgagcccacggaacctcctccttgtagggactgcttccgtcgccctcctcgccgtcgccttcgtggtgtataccggcgtgtggcagggtaaggcggatggggaggtcgagacgcctctgcgcagggccgtgcgctccgtcacgccgcttgacgcgcccaggatgatggatctgcctcagttccaaggagatcacaaggaaagcttgtattggggtacctacaggccgaatgtatatcttggaattcgtgcaagaaccccgttgtctctaattgctgggataatgtggattggtgcaaagaatgggcaatactttcttcgtcatgtttgccaagattctgatgagcttagcacatatgggtggacagatcacaatgggagggattatggacatcaagtgttggttgatcatggcttgttgttgaccacgagtttcctgaaagagaaaggagagggtagcggttatggtggagattgggcagttcgattgaatgcgaagactgatgggccaagtttaagtgaagaccaagaaagcaccacacacctgtttttctacatcgcggatgaagcagggaactcaatcactatggattcgcatataccttcgtcaagaggtcatgttcttttggcatctggatcccgtgaggagattggtgattggaaagtctatttgagatctgaggaaaatttggaaattcacagagctggattcaaatcaattagtatgcacaatctaagtgacctagtacagcaagcccttgcgactaatgcaatgcaaagtgggaaccttaaccttccagacatggcagaagattcttcaaatgtaatagtatatcaggtttccatgaaacgttctgccgaagtcgacatagtcttcttgtcaggggccgcctcagaaaacccaatgattgaagagcgcattaacaggctaacaggtcctgttctgagcactcgtcttgaatcaaaacagaaggattttgaaaagagatatgaccaaattttcaatgcaaataataagattaatcccaaagaattatctgttggtgttgctgctttatcaaatcttcttggtggaattggctatttctatgggcagtcaaaaattgcacttccaaaaggttttacagcgattacacatcacactcaaacaaaatctaatgcttcaagagtttccttgcagcaaaaaaatggggataaatatatcccatattggccagctgcactatatacagctgtgcctagtcgctcattcttcccaaggggatttctatgggatgagggcttccatcagttagtcatttggcgctgggatgtgcatatatcgatggatataattggtcactggttagatctaataaatgcggatggatggattcctcgggagcaaatattaggagctgaagctttaagtaaagttcctgaggaatttgttctgcagtacccttccaatggaaatcccccaaccttatttcttgcactgcgtgatttggcaagtggaatacatgcaaaccagttttcagatgaggaatctgaaaagatatccactttccttaaaagggcttatgtaaggctgaactcttggtttcagtggttcaatagcacacaaacagggaaatacgaaggcaccttttattggcatggaagagacagcatggccaccagggagttgaatccgaagactttgacatctggtttggatgactatccacgggcatctcatcctaatgatgaagagcgccatgttgacctccggtgttggatgcttttagctacgaattgtatgtgctcaattgcagagtttcttaaaacagacagctctcttgagaaggattactacaagatgtcaaatcaactttcagattttgggatacttaacaagatgcacttggatgataaaaccggtgcctatttcgactatggtaaccacacagaaaaggttcgattgagatggtatgaagttagagagaatgatgttatgagacgagagcttttgcgtgaaacattacaaccccctcagctgcaattagtacctcatgtcggttatgtcagcatgttccctttcatgatgggggccattccacctgaatcatgggttcttgagaagcagcttgatcttatatcaaatagctctatcctgtggacaaattacggacttcggtcactttctcgaacaagttcaatatatatgaagcgcaacactgagcatgatcccccatattggagaggtgccatttggataaacatgaactacatgattctttcaggactacaccactatgcacatgaggatggtccatacaaggacagggcaaaggaactgtatgatgagctaagatcaaacctgatcaggaacatcgtgaagaattaccatgaaactgggttcttctgggaaaactatgaccagaagaacaaaggaaagggtaagggtgcgaggtcctttactggatggacttcgcttgttgttcttatcatgggcgagtcctacccgaccctacatagaagagatgactacccaaatctgtcatggttctcgtggatcaatatttgcctgagccttcgagtgaactttgcttgctacttctgcaagcatatgatctcactctctaatgcaagcaaagtaccggaagattatcgtgatcgtactgcagcagtaacagcacgatcttctgtcatgaaaacggatactgctaatacgacaaactcaatccctaccatctgtcccgataaaaactaa</cdnaseq>

Protein Sequence

<aaseq>MSGGGGSSSVRRPVAAARSRSGPEPDARRAAAAAAAAAAAAARR RGRGDHGPLRLMEVSPRNLLLVGTASVALLAVAFVVYTGVWQGKADGEVETPLRRAVR SVTPLDAPRMMDLPQFQGDHKESLYWGTYRPNVYLGIRARTPLSLIAGIMWIGAKNGQ YFLRHVCQDSDELSTYGWTDHNGRDYGHQVLVDHGLLLTTSFLKEKGEGSGYGGDWAV RLNAKTDGPSLSEDQESTTHLFFYIADEAGNSITMDSHIPSSRGHVLLASGSREEIGD WKVYLRSEENLEIHRAGFKSISMHNLSDLVQQALATNAMQSGNLNLPDMAEDSSNVIV YQVSMKRSAEVDIVFLSGAASENPMIEERINRLTGPVLSTRLESKQKDFEKRYDQIFN ANNKINPKELSVGVAALSNLLGGIGYFYGQSKIALPKGFTAITHHTQTKSNASRVSLQ QKNGDKYIPYWPAALYTAVPSRSFFPRGFLWDEGFHQLVIWRWDVHISMDIIGHWLDL INADGWIPREQILGAEALSKVPEEFVLQYPSNGNPPTLFLALRDLASGIHANQFSDEE SEKISTFLKRAYVRLNSWFQWFNSTQTGKYEGTFYWHGRDSMATRELNPKTLTSGLDD YPRASHPNDEERHVDLRCWMLLATNCMCSIAEFLKTDSSLEKDYYKMSNQLSDFGILN KMHLDDKTGAYFDYGNHTEKVRLRWYEVRENDVMRRELLRETLQPPQLQLVPHVGYVS MFPFMMGAIPPESWVLEKQLDLISNSSILWTNYGLRSLSRTSSIYMKRNTEHDPPYWR GAIWINMNYMILSGLHHYAHEDGPYKDRAKELYDELRSNLIRNIVKNYHETGFFWENY DQKNKGKGKGARSFTGWTSLVVLIMGESYPTLHRRDDYPNLSWFSWINICLSLRVNFA CYFCKHMISLSNASKVPEDYRDRTAAVTARSSVMKTDTANTTNSIPTICPDKN</aaseq>

Gene Sequence

<dnaseqindica>1..351#808..881#1232..1483#1715..1889#2031..2117#2233..2301#2426..2522#2798..2880#3161..3268#3406..3581#3709..3816#3909..3982#4280..4405#5443..5510#5718..5867#5952..6002#6466..6522#6612..6758#6852..6943#7304..7413#7516..7579#7671..7820#8342..8576#atgagcggcggcggcggcagcagcagtgtccggcgacccgtagccgccgccaggagccgctcaggtccagagccggacgcgcgccgggcggccgccgccgccgccgccgccgccgcagcagcagcgcggcgccgtggccgcggcgaccatggccccctgcggctcatggaggtgagcccacggaacctcctccttgtagggactgcttccgtcgccctcctcgccgtcgccttcgtggtgtataccggcgtgtggcagggtaaggcggatggggaggtcgagacgcctctgcgcagggccgtgcgctccgtcacgccgcttgacgcgcccaggatgatggatctgcctcaggtgatgaccattaagttcgtcgcattgtttcttcaagcctccaatgctctgtgaaatagctttagattacaatctcgcgcggttgtagtctattagtgcgcttctgcttaatctgctgcaacagtagtagttaagaacttaattgaattgtgtaaaaatgctaggagaataacggaatcgaccactgcttgtttggattttacaagggctgctttatgtttgaaccacatagtggatacgactggtttgtcataggtaaaatgaatatgaattgtgcatagccgcaaatgtcatctgagctaggacagacgacctaaaatgtaccagtttctgttaaatatcctcctgtaagctagttctgattgatttatacgtaacatcatgttattccatactgttgagtttggatggtaattatggttagctttctgatggctcatagttgactgtttacagttccaaggagatcacaaggaaagcttgtattggggtacctacaggccgaatgtatatcttggaattcgtgcaaggtgcttaactttgatcttccccttgattcttatagcgtgctaatttaagcaattcagttctcttagtccaccatggcatgctagaaatatgcagggaagttcatattgctagcatcatatgttttttatgctttaaacacttctatggagttttgttcccatttgcttagtccatatgtgtcgagaacaaagatgttgttatatttcctgcttgattccttgaatgcgtattgtttttgtttctggtttagaatgttgccaccttaccacctcatagttggaattctattgctgtatgatgatgatatggtggcactctcaacttcttgctaatagtatttctatttcagaaccccgttgtctctaattgctgggataatgtggattggtgcaaagaatgggcaatactttcttcgtcatgtttgccaagattctgatgagcttagcacatatgggtggacagatcacaatgggagggattatggacatcaagtgttggttgatcatggcttgttgttgaccacgagtttcctgaaagagaaaggagagggtagcggttatggtggagattgggcagttcgattgaatgcgaagactgatgggtaagtgtatatttgtcagttacaaaactgaaaagttttttttactgaagagatgtaaacaattttccagttttaagtacaaggtgaaaagaccaataaattttactggattgactttttcattccctattcacaaaccaggatgatattaacaatcatttatttgctacctatataaagttaccaaaggaaccaaaagaaatttattccatgtagttatacttaatttaggccaagtttaagtgaagaccaagaaagcaccacacacctgtttttctacatcgcggatgaagcagggaactcaatcactatggattcgcatataccttcgtcaagaggtcatgttcttttggcatctggatcccgtgaggagattggtgattggaaagtctatttgagatctgaggtagcatatttcagtatgctcgtcacattgttgctactatttttttatttttctattttactcgctactggtatatagcattacaattccatataaactgatgttaatattgacatgtacagaactgtgtttttctcgcaggaaaatttggaaattcacagagctggattcaaatcaattagtatgcacaatctaagtgacctagtacagcaagcccttgcgactaatgtatgtcttagctccttacatttacctttttttttggggggggggtcaaaaacaagtctcagtttttttttatgaactcaagttgccatttagctgctcctgtgtacctttctaggcaatgcaaagtgggaaccttaaccttccagacatggcagaagattcttcaaatgtaatagtatatcaggtgcgtcaaagatgaaaaagaaagttattctgtcaatatgagaatccaatgagtcaacgtacacccagatttaaatagtgttctcttccggcattgtgatctatgctctctctcatcttcacaggtttccatgaaacgttctgccgaagtcgacatagtcttcttgtcaggggccgcctcagaaaacccaatgattgaagagcgcattaacaggctaacaggtgactctactgcatagctcatactgcatggagataggatatgtgattttccttttgttctattcattttgggatggcaatcatgccatagataccatgtcctccataatttggtatgcataggctcttgaccttttcttttgctgccttgcatttggtatccattccttttttttccttgcctgcatcttttccttctgttgaacctgaaattcagagatgttgaaagcaatatttcatcttgcttgttgattttatatcactaatgttgccaggtcctgttctgagcactcgtcttgaatcaaaacagaaggattttgaaaagagatatgaccaaattttcaatgcaaataataaggtgtgatctcttggatgagctttgtagttttgacaatcttcttttagcagtctatacagttgttttcttctcattatgctcctgttcctatgattatataaaattgctattgcgtataaatgatagtgtccttgccattttgttcaagtctgtacacttttcatagttgaaagaacctttaaaagctatttttcccctggaagataagtagtgtgactggctgcataatcagaagaaagtttgtgatggagcagttgatattattgtttcactgatgcagattaatcccaaagaattatctgttggtgttgctgctttatcaaatcttcttggtggaattggctatttctatgggcagtcaaaaattgcacttccaaaaggttttacagtaagttttagagtgttacctgataattagatccttttcctaatagctattgcagctgaactttatgctatctgatttagtcccccccccccttcttattactgtgctatcttttgtagatctgatataaatcctaggcgattacacatcacactcaaacaaaatctaatgcttcaagagtttccttgcagcaaaaaaatggggataaatatatcccatattggccagctgcactatatacagctgtgcctagtcgctcattcttcccaaggggatttctatgggatgagggcttccatcagttagtcatttggtaagcatttcatcgatcttgatgtgtagcgcagggcttctgccactatatcatcactcgctttttttttgaatctgtgctggtattattgctgcttgtttaacacatccttgatggtgatgtataggcgctgggatgtgcatatatcgatggatataattggtcactggttagatctaataaatgcggatggatggattcctcgggagcaaatattaggagctgaagctttaaggtggttcccctggcgagcaatgaaccattgtcatatctagctatgagtttagagtgtcagttcttatataatctgtttttacatttctgcagtaaagttcctgaggaatttgttctgcagtacccttccaatggaaatcccccaaccttatttcttgcactgcgtggtgagacaatgctttcttccttgctcttcactgtcatgacacattaaatgcagtatagcagtactgttgagaatcaaagtatctaaattatctgacttgagtatatctcagaaaatcaagttaccacaaaaacattattttgcactgttttcagtgcgtttgtctcaaatttataatattgagaattttcacgctgtctgcgattttggtttagcacaacaaggttgctactgtatggaagtgcataaactgtgatcgaacatcctattgagtttaacttgccactttttggtacagatttggcaagtggaatacatgcaaaccagttttcagatgaggaatctgaaaagatatccactttccttaaaagggcttatgtaaggctgaactcttggtttcagtggttcaatagcacacaaacaggtgagttaagttatgacattttatggtccatactatttattaggaacttggtaaccaatgatgcttgattgcttgtgaataactgcagacagaataacctgccctctttctggcaagtatggaatttgtatggattggatcttcactttaatttaggcctattattatgttaattaatgttcagaaaatacatgcctgaacacatgaacatgatgagccattaatatcttacttttcagtaaaaaaaagggtgatattttggggatgcatgcagtcagtgtatctatttatagctttataaatattttgattggatatacaaatatgacatgttcacattttatgaatggtttgattggataaaagagtactatcataaattatagttttatcattttttaagtgtactatcatatttgtgatttgtgaataggattgtgaccagcaaaattttctggccgttttgtcttgcagaagctactagtttttgcatcagttttggatgatgttagtcttcagatatccctggcactctatattttacatacactcaaggcagtgcatgctatatgaaataataattttgatcgtcaacttattcagtagtcgttgtttcactcatttactgttcctggacgagagagttatgaacccaaattcctgactctttagaaagtaactttaattcactgccacccaagaggaaccatgcaattgagatgttcaaacttacttagcgaagggaataaccttctgctcctgtgctaagcaaaatttagcttagtgtcattgcaaactatagccaccattccacatagctagaaattatgcaattactgttatctttaccttttccatcaccttgttgattgtttttttcctttttggcggacattgttgattgttatgtcaatgaacattggctgtactttccatgtgtggaataaccaatatttttgtttgtcatgccaacttttttcaccttcgacttatctatcctatatagcttctttgactttcaaacttgttttttttagggaaatacgaaggcaccttttattggcatggaagagacagcatggccaccagggagttgaatccgaaggttttggaacacttcatagttgctttcttccacagactaattggtcccaaataatagcaaaagaaatttgtttttgagcttttgtcatgcctacattacagtttatgtttttgagcttttgtcatgcctacgctacagtttcttgccttgtctttctatgtcatttctactaaccgttcactcctgatgttgctgactactctacagactttgacatctggtttggatgactatccacgggcatctcatcctaatgatgaagagcgccatgttgacctccggtgttggatgcttttagctacgaattgtatgtgctcaattgcagagtttcttaaaacagacagctctcttgagaaggtactgcagagtgaatggactgtgccttatgctttgtctcagcctttggttctcttgaaaaaaatctgtcttgaacttctacaggattactacaagatgtcaaatcaactttcagattttgggatacttaacaaggtattgctctgagagttctgactgtttcttcttgttctgagcttttgtcctttttaggtcagatagatacttaatctgcatatcaatccaccaatggctgctacattttggatataattaatggcttgatactccaacactaacacttgcgcctataacaataatggtttcttatattaacattttacatactagacgaagctaatagtttttgttttgtgcttggttttctgttcgtgatcattgcaatattatggttacatacttatatatgccataaagataataaactttgcataaacgcctgctgtgtcaggaagtcttacttttgatcaaacgttcaaagatcatatagcaactaaaatggtttttatcaattgccgccaatcattttgtgtcacaggaagggttttgatggtcacatttatcctatagtaatttgaaagtattggcatttttacagatgcacttggatgataaaaccggtgcctatttcgactatggtaaccacacagaaaaggtctctcttgcagttcctctatcttgccatcttgcctttcggacatgattcataactttcaaactctgatgacaatattattcttacaggttcgattgagatggtatgaagttagagagaatgatgttatgagacgagagcttttgcgtgaaacattacaaccccctcagctgcaattagtacctcatgtcggttatgtcagcatgttccctttcatgatgggggccattccacctgtatgctctttacctacatatacttgttctcacttttaccaatccagtgatgctcatcccctaaagtattaactaccattcaactctgttcaggaatcatgggttcttgagaagcagcttgatcttatatcaaatagctctatcctgtggacaaattacggacttcggtcactttctcgaacaaggtatatataaagataataactcatttaacctgaatcatgggcaaaatttcctacttgatctccagcaacctaaacttgcatcaagacgattagttatgaagctgatacttctggaataaatgagatatttcatttcatttatttatttgaaaagtgtaatttctttagaggatccaatactcaattggtaagacttgtcccgggggatgaagtgggtataagtctgcattgcccccaacacctaaatgtttatcgtttgagcttgttaatgaattaaaatcaacataacaatgtatacatagcattattgtttggtcttttggttactctgatctgaattatctgttgtccatggtccagttcaatatatatgaagcgcaacactgagcatgatcccccatattggagaggtgccatttggataaacatgaactacatgattctttcaggactacaccactatgcacatggtaaactctataacagatgctgctaaacaactattcagcttttacccttctgtaaattttactgtttgcacgatgatctaataacattgttctgctctgaagaggatggtccatacaaggacagggcaaaggaactgtatgatgagctaagatcaaacctgatcaggtatatccctctctcttccctaagctgaataaaatagttaaattgcagcctctttaatagattgctgttgctacttttgtgcttcttacaggaacatcgtgaagaattaccatgaaactgggttcttctgggaaaactatgaccagaagaacaaaggaaagggtaagggtgcgaggtcctttactggatggacttcgcttgttgttcttatcatgggcgagtcctacccgaccctacataggtaagcgaatattccaacagagaaacaacacaacaaatcccaattggaaatttggaatggaagacctgaacatgatttagctcgattttgaccccaaagaaaaaccctcggaaaaactttgatcgtgggggttttgaacaataaccggtgattactccgtgctgcatatatggtttgtgccttcttgagacagtagttacgtagctaatgataacatttatcctagattctgtaactagtgtctcgataaacattttttttggggctttgagatccctttggaggagcaaagtatgcactagaatcgagaggtaatgaaattctaacgtaatctgcccatgtctacgcgttgttggcttcttgctgcagtctgtagcgttggccttgtgttaaacaatttttatgttaagaaaagaaacttgatcacggggattcagggagctgtaacctgtaaggtccatctacggctaatggagtaatagctcggcactaatacagttcttaccgtttctgccatgaagaagagatgactacccaaatctgtcatggttctcgtggatcaatatttgcctgagccttcgagtgaactttgcttgctacttctgcaagcatatgatctcactctctaatgcaagcaaagtaccggaagattatcgtgatcgtactgcagcagtaacagcacgatcttctgtcatgaaaacggatactgctaatacgacaaactcaatccctaccatctgtcccgataaaaactaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0921200, RefSeq:Os01g0921200