Difference between revisions of "Os01g0969100"

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(Created page with "{{JaponicaGene| GeneName = Os01g0969100| Description = NAD-dependent epimerase/dehydratase family protein| Version = NM_001052058.1 GI:115442486 GeneID:4323835| Length = 3...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0969100|
 
GeneName = Os01g0969100|

Revision as of 19:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0969100

Description

NAD-dependent epimerase/dehydratase family protein

Version

NM_001052058.1 GI:115442486 GeneID:4323835

Length

3410 bp

Definition

Oryza sativa Japonica Group Os01g0969100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44533611..44537020

Sequence Coding Region

44534069..44534184,44534279..44534414,44534494..44534586,44534677..44534778,44534871..44535004
,44535081..44535195,44536180..44536287,44536378..44536470,44536554..44536853

Expression

GEO Profiles:Os01g0969100

Genome Context

<gbrowseImage1> name=NC_008394:44533611..44537020 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44533611..44537020 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtcgtcgtcgtcgccgcccgccgcctccgccgccgcgaggctggatctggacggcaaccccatcgcgcccctcaccatctgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccgagaccgcccacgtcgtctacgccgtcgacgtctactgcgacaagatccgccacctcgtcgaccccgcccctccccacctccatggccgcatctccttccaccgcctcaacatcaagaacgactccaggctcgagggcctcatcaagatggccgatctgacgatcaacctggcggcgatctgcacgccggccgactacaacacgcgccccctcgacaccatctacagcaacttcatcgacgcgctccctgtggtcaagtactgctctgagaacaacaagcgtctcatccacttctccacgtgcgaggtctacggcaagaccatcggcagcttcctccccaccgaccaccctctccgcaaggaacctgaattttatgtactgaaagaagatgaatccccctgcatttttggtccaattgtgaaacagcgatggtcttatgcatgtgcgaagcagcttattgagaggcttatttttgctgaaggagcagaaaatggccttgagttcacaattgtgagacctttcaattggattggaccaagaatggactttattcctggtgttgatggtcctagtgagggtgttcctcgggttttggcatgtttcagtaacaatctcctgcgtcgggagcccctgaaacttgttgatggtggccagtcccagagaacttttgtttacattaaggatgccattgaagctgttcacttgatgattgaaaatcctgctcgtgccaatggtcaaatcttcaatgtcgggaatcctaacaatgaagtcactgttaggcaattggctgaaatgatgacagaggtctatgcaaatgtctcaggagagccaccactggatgaacctatgattgacgtgagttcgaagcagttctatggtgaaggatatgatgatagtgataagaggattcctgacatgaccataatcaacaagcagcttggttggaatccgaagacccctctcaaggatttgctggagacaacattgacctaccagcacaagacttacaaagaagctatcaaaaggcaaatgtcacaggcttcagcgtcgagttag</cdnaseq>

Protein Sequence

<aaseq>MSSSSSPPAASAAARLDLDGNPIAPLTICMIGAGGFIGSHLCEK LMAETAHVVYAVDVYCDKIRHLVDPAPPHLHGRISFHRLNIKNDSRLEGLIKMADLTI NLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLP TDHPLRKEPEFYVLKEDESPCIFGPIVKQRWSYACAKQLIERLIFAEGAENGLEFTIV RPFNWIGPRMDFIPGVDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDA IEAVHLMIENPARANGQIFNVGNPNNEVTVRQLAEMMTEVYANVSGEPPLDEPMIDVS SKQFYGEGYDDSDKRIPDMTIINKQLGWNPKTPLKDLLETTLTYQHKTYKEAIKRQMS QASASS</aaseq>

Gene Sequence

<dnaseqindica>2837..2952#2607..2742#2435..2527#2243..2344#2017..2150#1826..1940#734..841#551..643#168..467#gaggagaagagagagtgtgggcgctcttaaataggagagaaaaagaaaaccaccgccaccgacatcgcctcgcctcgtaacccccaaatccagcgcctcccttcctccccaataatcgaatccaatccatcttccacgcgcattccggatccgcggaccaagggaggatgtcgtcgtcgtcgtcgccgcccgccgcctccgccgccgcgaggctggatctggacggcaaccccatcgcgcccctcaccatctgcatgatcggcgccggcggcttcatcggctcccacctctgcgagaagctcatggccgagaccgcccacgtcgtctacgccgtcgacgtctactgcgacaagatccgccacctcgtcgaccccgcccctccccacctccatggccgcatctccttccaccgcctcaacatcaagaacgactccaggctcgagggcctcatcaagatggccgatctggtctctccctctctctccctcctgctctcaatttcaatctcatttcatttctgataacacgccttgattccggatctgcgtagacgatcaacctggcggcgatctgcacgccggccgactacaacacgcgccccctcgacaccatctacagcaacttcatcgacgcgctccctgtggtaatccctcctcttctccactccagatttcttcttcttcttttctaccactagtgcagaattgttgatggacgtgtgtgatgtgcacaggtcaagtactgctctgagaacaacaagcgtctcatccacttctccacgtgcgaggtctacggcaagaccatcggcagcttcctccccaccgaccaccctctccgcaaggtcatccaccatatcactctattttgacgtttcttctggataataatgtgcttgtgccaattgtacaagtctgtgtgacattttcttttttggttggttgactgaaaagcaaactgattggtactgattagattgggggtggaatggatctggtgcaggtctgctagattcagttgttcagctgccattatcctgtacttgctgttgtacggccttgacagtaaggttgggttagatttggtgttggttgggaatggattttcttattggaccttgtctggttgttggttgacactcggatatatggtcttgtgatggtggttctgtttcaggattattgaatgttttgactttcttaggatagcagagttgacagcatctcttggagtgtcagtatttctcatgttgctctatccttcatctgtgtagattgtccagtgccatgttgtgttatggaatgacttgttcctcctctagtttgatgatacttatttcttcaggcataactatgtttatgtgctactactgcacattgctttgcaagtggatatagtaatcaagaatacatggcatcttaaggaaatgtcttttctaattgtatttccaatgtgataagttagtcctgtaggtgcatcagtatttaaagtgaagtcaactagcaacacgcttggagggtcaggatctaatgataacttgcttattgttccatggacttccccaataaagtttaccctagagtctatattgttgagttgtatgctttgcaatgtatttgtctactttcacggagacagtagaggagggccctacgcccctactgaaatgcagtagtccagttgttgcattctctttagttaaattgctatgcatttgcattgacatggatggagaaaggagcaagtgtaaacctgcccattacatgtcttaattttgatcacaattgactcttatctgatatttgtgtaccttcaaactttgaaacaggaacctgaattttatgtactgaaagaagatgaatccccctgcatttttggtccaattgtgaaacagcgatggtcttatgcatgtgcgaagcagcttattgagaggcttatttttggtgagtgcagtaacttttgttattcatgtcattacctgaacactttgtaaccgtgtgctttttgagctttaaccagctgaaggagcagaaaatggccttgagttcacaattgtgagacctttcaattggattggaccaagaatggactttattcctggtgttgatggtcctagtgagggtgttcctcgggttttggcatgtttcagtaacgtatgtcaaccagtccctttctgagaataatatacctccatttcgttatggtcgtttttctcataagatgtatgtcgccaatgaatttgcagaatctcctgcgtcgggagcccctgaaacttgttgatggtggccagtcccagagaacttttgtttacattaaggatgccattgaagctgttcacttgatgattgtatgttttctctgtttatctttacttcctttgctcttatgctagatttaccttgttagttgaactgaaatgtgtactttatgtcaaaaggaaaatcctgctcgtgccaatggtcaaatcttcaatgtcgggaatcctaacaatgaagtcactgttaggcaattggctgaaatgatgacagaggtacatcattagcgtggcaatgtttctttgagcgtttctgttactcatgccctaagtcttacatggttgtcctgtacaggtctatgcaaatgtctcaggagagccaccactggatgaacctatgattgacgtgagttcgaagcagttctatggtgaaggatatgatgatagtgataagaggattcctgacatgaccataatcaacaagcagcttggtatttactgtcttcaataacctgttatgtctatgttgtactagttgggtaaccagtggttcataataaccaaatattgattcaactgttctaggttggaatccgaagacccctctcaaggatttgctggagacaacattgacctaccagcacaagacttacaaagaagctatcaaaaggcaaatgtcacaggcttcagcgtcgagttagacaacacgctccaatccatagatggtgatgttggctcttgtagagcactgtcagtggctataatcgtttggaagtggaatacgtatactcaagtaatcctttttgtgcatctagtcactcctagatccctaccaacttttaggtttcctcctgtgtaagccggcaaggggttatccaccatatctgtggcagagtcgatgtattcatttgtacctttggttgctcatcctgtgtcattctttcttattgcttcgtcggtgagagatgttcttgttcagtatagatgattgttcaaggaaattatgggctggaagctataatggttgtgagttaagttctttgagtttagtacagcaactagtagtaggctgttagaagcaaaatctgcaaatttcactacttggtagttgtgattcatatgaccgactaatttgtggtaacttgtttgttccatgcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0969100, RefSeq:Os01g0969100