Difference between revisions of "Os01g0971600"

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(Created page with "{{JaponicaGene| GeneName = Os01g0971600| Description = Similar to Sn-glycerol-3-phosphate dehydrogenase (Fragment)| Version = NM_001052070.1 GI:115442510 GeneID:4323847| L...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os01g0971600|
 
GeneName = Os01g0971600|

Revision as of 19:06, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0971600

Description

Similar to Sn-glycerol-3-phosphate dehydrogenase (Fragment)

Version

NM_001052070.1 GI:115442510 GeneID:4323847

Length

5781 bp

Definition

Oryza sativa Japonica Group Os01g0971600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:44655680..44661460

Sequence Coding Region

44656040..44656050,44658208..44658337,44658421..44658469,44658653..44658707,44658778..44658898
,44658983..44659020,44659100..44659163,44659266..44659373,44659458..44659675
,44660032..44660104,44660188..44660264,44661009..44661120

Expression

GEO Profiles:Os01g0971600

Genome Context

<gbrowseImage1> name=NC_008394:44655680..44661460 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:44655680..44661460 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagaacggacacgccaagaatcttgtggccgtcatcggcagcggcaactggggcagcgtcgcctcccgcctcatcgcttctaacaccgctaagttgccctcctttcatgatgaagtaaggatgtgggtgtttgaagaaatattaccaacaggcaagaagctctctgagtccattaaccaagcaaatgagaattgcaaatacttacctggtataaagctcggagctaatgtaattgctgatcctgatttggagaatgcagtgaaagatgcaaatatgcttgtttttgtgactccccatcaatttgtggagggtatatgtaagaagcttgtgggtaaactaaggccaggaactgagggtatctccctcatcaagggcatggaggtcaagatggaaggaccatgcatgatatctaaattaattacaaacatacttggaatcaattgctgtgtccttatgggtgctaacattgcaaatgagattgctgttgagaaattcagtgaagcgacaattggatataagaaagacaaggaagtggcaacccgatgggctaaactttttacaacaccttacttcctggtttctgttgtagaggatattgaaggagttgaattatgtggaacactgaaaaatgtcgtggccattgcagcaggtcttgttgatggtttggatatggggaacaataccaaggctgcaataatgaggattggtttgcgggaaatgcgtgctttctctaagcttctatcccctacagtcagggacaacactttctttgagagctgtggtgtggctgacctaataactacatgccttggtgggagaaacagaagagtcgctgaggcctttgcacgaaatggtggcaaaaggtcttttgatgagttggaggccgagatgctacatggccaaaaacttcagggagtgtccacagcaaaagaagtttatgaagtcttgacttatcgagggtggcaagaattgtttcctcttctgtccacagtgcatgagatttgtattggtcagctacctcctacatcaatagttgaatacagaatccactga</cdnaseq>

Protein Sequence

<aaseq>MENGHAKNLVAVIGSGNWGSVASRLIASNTAKLPSFHDEVRMWV FEEILPTGKKLSESINQANENCKYLPGIKLGANVIADPDLENAVKDANMLVFVTPHQF VEGICKKLVGKLRPGTEGISLIKGMEVKMEGPCMISKLITNILGINCCVLMGANIANE IAVEKFSEATIGYKKDKEVATRWAKLFTTPYFLVSVVEDIEGVELCGTLKNVVAIAAG LVDGLDMGNNTKAAIMRIGLREMRAFSKLLSPTVRDNTFFESCGVADLITTCLGGRNR RVAEAFARNGGKRSFDELEAEMLHGQKLQGVSTAKEVYEVLTYRGWQELFPLLSTVHE ICIGQLPPTSIVEYRIH</aaseq>

Gene Sequence

<dnaseqindica>5411..5421#3124..3253#2992..3040#2754..2808#2563..2683#2441..2478#2298..2361#2088..2195#1786..2003#1357..1429#1197..1273#341..452#aagtgccaagacagactgccatgtctctatcgattccaatggtctgttgctgaaaaggacaatctggtagagcggctcgcacgatacagacacatgcacttcttggggatgctcgcccctccttcctagtaacattcttcaccccccattttctttgtttctacttctctttccctttcttgtgctccctcccctcctcaatccgtatatataagctagctgctcgttcttgttggctccttcttcctattatttctttgtttgctccctccccttgctggttggctggctgggtcggtcgggttctttcttgatctgcatttcgccctccgccaccgggatggagaacggacacgccaagaatcttgtggccgtcatcggcagcggcaactggggcagcgtcgcctcccgcctcatcgcttctaacaccgctaagttgccctcctttcatggtaggtaccttccctctcacaattctccattaattccccatgtgttgcatttctgaattatgcatctccctatgtgggctctatgcatatcagcatatgcattgtgtttgctacaactgttgggtcatttccatgtctattgttgtttgtaattgtcttctctaagactctaaccattcaatcagagaccatatataccctgtgttttgttgggatctttctacttgtaacaaaaacaatcttactgcattccacttagcccctgtaagatgttcttttgagagcctatcaatgttatccaaccgcatgaaaccatcaaattgactttattatttaagattgaattgccatgttgtagtctgcaaattatctaccacaaacgtactactccctccttccttaaatgtttgacgctgttgacttttttaaacatgtttgaccgttcgtcttattcaaaaacttttgtgaaatgtgtaaaactatatgtatacataaaagtatatttaacaataaatcaaatgacaggaaaagaattaataattacttaaattttttgaataagacgaacggtcaaacatttttaaaaaagtcaacggcgtcaaacattttgggatggagggagtagtatttattgggtacttgggggaactctaatgctagctatggttcttttttgcatgagttcttttgacaaccctacatcctgcacctatttgtgctgattttgttgtaatttattcgtagatgaagtaaggatgtgggtgtttgaagaaatattaccaacaggcaagaagctctctgagtccattaaccaagcaaatgtaagagttcaaactaattccccgtgctttattttacttctggaatcagtaaatgattctagcatgatcctcgcatattacaggagaattgcaaatacttacctggtataaagctcggagctaatgtaattgctgatcctgatttggagaatgcaggtaaacaccgtaaattgtattcctaattataattattcttaattggatacattgctcttggatgctacaataatgcttagagatctagttaatgaaggaagttctcttcaccaaaaaaaagaaaaagaaaaagaaaaaagccagcagctgcttcagtaaaatgaaaatcaacttatagatacactcaaaattattagctttgatgtgctatttgatactactttggggggtgggtgggatgttgtaatataggtttcataagcaaaatgctatcatcattgcagcctccctgtctacatcatgctttttttcatcttgacaaacaaacacccataaaagtctcctttttttttcagtgaaagatgcaaatatgcttgtttttgtgactccccatcaatttgtggagggtatatgtaagaagcttgtgggtaaactaaggccaggaactgagggtatctccctcatcaagggcatggaggtcaagatggaaggaccatgcatgatatctaaattaattacaaacatacttggaatcaattgctgtgtccttatgggtgctaacattgcaaatgaggcaagcatcttctgaacttcccatgcaaagtttctttgtactccctaaaggtgaaaagtaaccaggtgcacctttcaaatgcagattgctgttgagaaattcagtgaagcgacaattggatataagaaagacaaggaagtggcaacccgatgggctaaactttttacaacaccttacttcctggtttctgttgtaagttcaaccataaaatctcattgaaacaaaccctctcaccagagtgattcctagcagtggttcagcagaaaatgaaaaacctgtgtccttcatgtacaggtagaggatattgaaggagttgaattatgtggaacactgaaaaatgtcgtggccattgcagcaggttttacatgtttgttaatttgtagtagtcattgtttcctttcaaattttaatatttaagtgatggaatcaacttgcaggtcttgttgatggtttggatatggggaacaataccaaggtatgctatttttattgaaaacataacagagaagaattttcattgtatcatagagtttaatgatctgttttatctatttgtcaggctgcaataatgaggattggtttgcgggaaatgcgtgctttctctaagcttctatcccctacagtcagggacaacactttctttgagagctgtggtgtggctgacctaataactacatgccgtatgtatctcattgttctccttttaccattgagctgacaaacactgacaagatgagtgtttcatggcagttggtgggagaaacagaagagtcgctgaggcctttgcacgaaatggtggcaaaaggtttcttgtctaaaacatacataatgtcttttgataattttactctatactttaactttgttagagaatcaaaatacaaagtatgtcgatgttgatggcctatactaaagagttttcacatagatttttttttctgttttgtgatgattacataataactatggtatttcatcattcttacaggtcttttgatgagttggaggccgagatgctacatggccaaaaacttcaggtaagcaaatatctggaaccaagcaaacatggtgaattcgttgccttcttagtgcatctaatctttattagtttcacttgcagggagtgtccacagcaaaagaagtttatgaagtcttgacttatcgagggtggcaagaattgtttcctcttctgtccacagtgcatgagatttgtattggtcagctacctcctacatcaatagttgaatacagtgagcacacgcccaacctctccatcatcaatggttctaatgcgtattactgagctagattctgcaaattgtattattgccactattctcagtatcacttgttacaacagaacaagttgaaacatacctaatgtctgaatccgttatatatataatattattattcagccatgtcacctcataaagtgcatgactgattatgtgtttctgtcccttgttgtttggaaattgagtgaccttgccagaaatccatggattggaataaacaaattcagtttatatggaaaatagagtgaaagaatttcatggtataatttataagggtgcttcttgaatgaaacaccacaaacaacaggccatgcttaagtttaataacctggaagtttaaaaagttaatgaccctcgcccaaaaaaaagaaacaatttacatccagtatgcagttcactgttcacccatttcataattttgtaatatagtgtgtttttacaaacacgctgtgtacattgtttccaacttccaagtatcacaaaagaaaactaatatttgagcctttatatttagagctttccacatttcaataattcattgtatgtagtaaagaccaaggaaatgttgagtgataatttgggaagacttaaatagtgttgttttggattcatggagtgctgatttgatattgaaatgttaaatttggaaggattcccaattacaaactgttgatcaggccttgtaattttggagctgcttttgctgacagacagagcaacaatggattgtagaactataataccatattcctacttcctagatggaatgtttcatccgaaagcctcactggcctggaatcatgatgggtagaggggtaggtggaggtgtgcaaggaacttgagagcgatcactgtattgccttatatgataagtaagcaatgaactaactgaatattccaggaccaccaggtggacttgatgcctgtgctgatccagttctgggtcattgggtgtactgacgatatcattggacacaaacatggagaacatttctaatggaagaaattgcattctaatacagtgaaacacaggaataaaatattagagactgaatttgaacaaataatcattctactataattttctgaatcaattggaattcaagttcctagagttcacactatgacatggagaagaagtttgcgagttatgtaatgaaagaagttaaaagtgtactttctatattttaagtttcgtccaatgacttcatttaagagtagcagattttgcacctagcttttgtcatgcagattttgttaagcttctcttagctgaacccattttcactattatcgaagtttgctagttgaaaatttggtctttgatacaaaatgctgcttcctttcagtaaattttagtggccttagaattttacaatccaagtaccttaagaaccttcagataatgcaactttctgctataggctacttgatacagtgaatagattgttgatttcctttttgaatggcatgtgtttctgatgatctattttaatataagatgtatttcttttactcttaacacatgcaggtattacttagaaatgatatttattttaggagtgttttgtattccctggacagttttcacttgtagttctccaatttcatctcaataatcaaatcttaaacatattgcaatagcatttgccaagataaaattattcatggtacagtatccactatatgaagatgaagcggaaacacgctaatgattgttcatgtcctgtcttagatgcaaccaaaataaactatttcacctttcacggattagttgatttatcatattttagtggattaaattgtccacaacattttaaattccaatcttcctggggaacaaggaccaaaagaatctgccaaacacatcactttcatctttttatgtctacaaagtaacttttggtgttgagcctagacaagacacaaacaagataacatgaaatacctccaaaacttgaacagcggaatttatttggagtcatggcaatatgctcatcgaaattcaggacctagtttctttctttaaaagaaaactgtgactcatgtttcaattccaactggcataagtttttatttctattgtgacctgacatgaacccgtttcaggaatccactgaatgctgttctctgaagatgtcatcaataacagtttcagcttgctaaaggtcttgaaggacctctgctttctagtggagcaaggctcaggaaattcttcatgtcagtgttcttcgttgcggggtcatcaactcatctgtcagatcttggacatttccaggccttcagcaacagtccatgcaagaagtcgtcagaatgcacttacatttcacatctgtttatgactgattacacattatgctcatatgtgctttatttttttaatgatacaacgcatcagtatgtgagcaatatagtttgctcatatttgttatcgtctaacagtggcttgttaactatgttgaggttttatattcacaact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0971600, RefSeq:Os01g0971600