Difference between revisions of "Os02g0131400"

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(Created page with "{{JaponicaGene| GeneName = Os02g0131400| Description = Similar to Beta-D-glucan exohydrolase, isoenzyme ExoII (EC 3.2.1.58)| Version = NM_001052326.2 GI:297598531 GeneID:43...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0131400|
 
GeneName = Os02g0131400|

Revision as of 19:08, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0131400

Description

Similar to Beta-D-glucan exohydrolase, isoenzyme ExoII (EC 3.2.1.58)

Version

NM_001052326.2 GI:297598531 GeneID:4328197

Length

4445 bp

Definition

Oryza sativa Japonica Group Os02g0131400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:1644280..1648724

Sequence Coding Region

1644280..1645161,1645328..1645432,1646322..1646805,1647680..1647884,1648538..1648724

Expression

GEO Profiles:Os02g0131400

Genome Context

<gbrowseImage1> name=NC_008395:1644280..1648724 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:1644280..1648724 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcgggcggcggcggaggaggaggggagtgtcccaagtacaaggactcgaagcagccgctgaacaagaggatcgacgacctactccggcggatgacgctggcggagaagatcggccagatgtcgcagatcgagcgcgagaacgccaccttcgacgtcatgcgcaactacttcattgggagcgtgctgagcggcggcggcagcgtgccggcggcgcaggcgtcgccggcggcgtgggtgtcgatggtgaacgagatgcagcgcggcgccatggcgacgcgcctcgggatccccatgatctacggcatcgacgccgtccatggccacggcaacgtctacaaggccaccatcttcccccacaacgtcggcctcggctgcactagggacccggatctggcgaagaggatcggcgcggcggtggcggcggaggtgagggcgacggggatcccgtacgtgttcgcgccatgcgtggcggtgtgcagggacccgaggtggggccgctgctacgagagcttcagcgaggaccccagggtggtgcagcgcatgtcctccatcatctccggcttccagggcgagatccctcccggcggccgccgcggcgtccccttcgtctccggcgggaggccgagcgtggcggcgtgctcgaagcactacgtcggcgacggcggcacgacgcgcggcatgaacgagaacaacacggtggcgacgctccgggagctgatgacggtgcacatgccgccctactacagcgccgtggcgcagggggtgtccacggtgatggtgtccttctccagctggaatggcgtcaagatgcacgccaaccacttcctcatcaccgatttcctcaagtccaagctccgcttcaggggattcgttatctcggattggcaagggcttgacaggatcacgaccccagcacatgcagactacatgttgtccatcaagctgggtatcatggctggcatcgacatggtgatgatcccgttcacgtacacggagttcatcgacgacctggcggcgctggtgaagaacggcacgatcccgatgagccggatcgacgacgccgttcgccggattctccgggtgaagttcaccatgggcctcttcgagcgcccctacgccgacctcagcctcgccggcgagctcgggaagcaggagcaccgcgaccttgctcgcgatgccgtgcgcaagtcgctcgtcctcctcaagaacggcaagcccggcgacgcgccgctgctgccgctgccgaagcgggcgcgctccatcctcgtcgccggcgcccacgccgacgacctcggcagccagtgcggcggctggaccatcacctggcagggcctcgccgggaacgacctcaccgccggcggcaccaccatcctcgacggcatccgccgcgccgtggatgccgccacggaggtcgtcttcgccgaggcgcccgacgccggcttcatgcggcggaacgcggggaggttcgacgccgccgtggtcgtcgtcggcgagccgccgtacgccgagacgctcggcgacaacctgaacctgaccatcccggcgccggggccgagcgtgatccagaacgtctgcggcggcggcgtgaggtgcgtggtggtggtggtctccgggcggccgctggtgatcgagccgtacatggacgccatcgacgcgctggtggcggcgtggctgccggggacggaggggcagggcgtcagcgacgtgctgttcggcgactacgagttcaccgggaagctggcgaggacgtggttccggtcggtggagcagctgccgatgaacgtcggcgacgagcactacgacccgctcttcccattcggattcggactcgagacccgcaaagctaattaa</cdnaseq>

Protein Sequence

<aaseq>MAAAAGGGGGGGECPKYKDSKQPLNKRIDDLLRRMTLAEKIGQM SQIERENATFDVMRNYFIGSVLSGGGSVPAAQASPAAWVSMVNEMQRGAMATRLGIPM IYGIDAVHGHGNVYKATIFPHNVGLGCTRDPDLAKRIGAAVAAEVRATGIPYVFAPCV AVCRDPRWGRCYESFSEDPRVVQRMSSIISGFQGEIPPGGRRGVPFVSGGRPSVAACS KHYVGDGGTTRGMNENNTVATLRELMTVHMPPYYSAVAQGVSTVMVSFSSWNGVKMHA NHFLITDFLKSKLRFRGFVISDWQGLDRITTPAHADYMLSIKLGIMAGIDMVMIPFTY TEFIDDLAALVKNGTIPMSRIDDAVRRILRVKFTMGLFERPYADLSLAGELGKQEHRD LARDAVRKSLVLLKNGKPGDAPLLPLPKRARSILVAGAHADDLGSQCGGWTITWQGLA GNDLTAGGTTILDGIRRAVDAATEVVFAEAPDAGFMRRNAGRFDAAVVVVGEPPYAET LGDNLNLTIPAPGPSVIQNVCGGGVRCVVVVVSGRPLVIEPYMDAIDALVAAWLPGTE GQGVSDVLFGDYEFTGKLARTWFRSVEQLPMNVGDEHYDPLFPFGFGLETRKAN</aaseq>

Gene Sequence

<dnaseqindica>3564..4445#3293..3397#1920..2403#841..1045#1..187#atggcggcggcggcgggcggcggcggaggaggaggggagtgtcccaagtacaaggactcgaagcagccgctgaacaagaggatcgacgacctactccggcggatgacgctggcggagaagatcggccagatgtcgcagatcgagcgcgagaacgccaccttcgacgtcatgcgcaactacttcattggtatacttgattgcttcttggttcttgcagcagagatacatattgattcttgcatctaaaaacaagatacacatataataagtagaatgcgaatgcaaacacctcaggaaattatatataatatctaattaatatcgatgaaagcttttgcgtgtttgaaaaaaaactataatatagtgcaggtcaaactaaaacagtttgaagtctgaagttctctaatatatatttttgacatgcaaagattttacgcgttcgtgaagaaaaagtttgaagtttgaacgaatgtctatattgtgattcggccaggagtttgtttaagctagctataacaaaataacatttcttaaagaattcgtactttgataatgggtaatgcagacaaatgtctaacgaaccagtttggtgagattgggagtcaaacactctgaatccgtatgatatggtcatggaaatatggatattataagatactaatgattttgtaaatacaaggtttgaatcttagctttcactgcaagcacaagtgagggcatgcatctccataaataaatgtaaatactaaaacagattcaaaatgaattaattaatcaaaattagctagctactcaaaccggccattaaattaagacgaatatatatctctcaaattgcagggagcgtgctgagcggcggcggcagcgtgccggcggcgcaggcgtcgccggcggcgtgggtgtcgatggtgaacgagatgcagcgcggcgccatggcgacgcgcctcgggatccccatgatctacggcatcgacgccgtccatggccacggcaacgtctacaaggccaccatcttcccccacaacgtcggcctcggctgcactaggtaataaaatgattaattatcccccttaattaaactcaattaatgatgcatgaattaagtagattcccatatgtagctagttgtgataagtttactgaagatgaccagattgcacgccattaattaatcatccaagtctttgtatataaactctcaaaatttgcagtgctcgatgatgatggagtgagatccaagatttgagattttaaattagcgcgatcgatcgctcacgtcccaacgttttggacaagggaaagagttactaattgcccaactcgccaactagtaatattttgacgttgtcactctaattaatggtttctcaaacgcgctgaatttgaaaaggaaaaaaaaagacagattcgacttgaaaaaaaacccctactatcataagagtaattttaccatctttgaaaaataaagtaccataatttttattgtaaaatttggtacatctaaatattagctagcttaagttaccaaattttattttctagtgtaaaaatctttggtatcttcagttacgttttaaaatgttcgtaaaatttctcatcatacaataatgtcgtaatcttattttaacacaagaccaatagtaatagttttctaaaagttttactggattttattcatcaccggagggagggaatatacaaagataagctagctagctagtgagagcatatgaacatggtgtgttcttctccgagagatttgatagtgtaacacttcttaaaataggtttcgattatttgacattctgacccactttcatttacttagatggctcacatatcatcatcacaagtatcaattaaaacaattgggcaacgaagaaagtgtcaaattatcaatttttttcgttcttctccagggacccggatctggcgaagaggatcggcgcggcggtggcggcggaggtgagggcgacggggatcccgtacgtgttcgcgccatgcgtggcggtgtgcagggacccgaggtggggccgctgctacgagagcttcagcgaggaccccagggtggtgcagcgcatgtcctccatcatctccggcttccagggcgagatccctcccggcggccgccgcggcgtccccttcgtctccggcgggaggccgagcgtggcggcgtgctcgaagcactacgtcggcgacggcggcacgacgcgcggcatgaacgagaacaacacggtggcgacgctccgggagctgatgacggtgcacatgccgccctactacagcgccgtggcgcagggggtgtccacggtgatggtgtccttctccagctggaatggcgtcaagatgcacgccaaccacttcctcatcaccgatttcctcaagtccaagctccgcttcagggtatgtgcactactactatatatatacttcctccgtcccaaaatatagtcattttttaggttggcacaggtattaagaaagtaaatgagaataattggagaaagtgtgtgattggttgaaaagagaaagtaggtgaagaataatggttgtgattggttgagaggaggtatgtggagaaatagctttattttaggacaagacactctgctagaaatagctacattttgggatggaggtagtatatgctatacctttgtctacaaatatatatattcccttcaccctaaaataaataaacttaatacactaaagttggatataagtcgtacgtactaggttatatcacatctccaactaaattggtttattttgaaatggagagtataaggcttaattttgatggttaaaaataaactttgaaagtaaattcctctttcgttattttatttatgaaaaataaactatggtcataacaaaaatagtctcagttttaaaatataattatttctagtatttatttttttctaaaatataagcaattcctaatagcctcttatttaaatttctttttattttagccccccaaccaccactcattcaatgagaggcacccaattattttcttggcaacttttctccactaaacaatatagaaatatttatattttaaaatagattatgtgcttttgaacatgaattcatccgtatcggtgcatgtaaaatattattattggtttaataattagtcaaagatttaaaattaattggtagtcaaactcgacttgtatttctattttctagacggtagtacatacgtgtgagatcttcatgcatatatgatgtgatctgtttaagtttgaaaattaattaatgtgttattcaatttcagggattcgttatctcggattggcaagggcttgacaggatcacgaccccagcacatgcagactacatgttgtccatcaagctgggtatcatggctggcatcgacatggtcagtacagtgcacacattaatacatgcaaaaactaatttcatcataaaattttcatttcattgataaataagagacaaatatcgatccaagaaatggtcctttacacccaaaacatttcataattaattgactgattaattttcgaatgtttgtgtgcaatcaggtgatgatcccgttcacgtacacggagttcatcgacgacctggcggcgctggtgaagaacggcacgatcccgatgagccggatcgacgacgccgttcgccggattctccgggtgaagttcaccatgggcctcttcgagcgcccctacgccgacctcagcctcgccggcgagctcgggaagcaggagcaccgcgaccttgctcgcgatgccgtgcgcaagtcgctcgtcctcctcaagaacggcaagcccggcgacgcgccgctgctgccgctgccgaagcgggcgcgctccatcctcgtcgccggcgcccacgccgacgacctcggcagccagtgcggcggctggaccatcacctggcagggcctcgccgggaacgacctcaccgccggcggcaccaccatcctcgacggcatccgccgcgccgtggatgccgccacggaggtcgtcttcgccgaggcgcccgacgccggcttcatgcggcggaacgcggggaggttcgacgccgccgtggtcgtcgtcggcgagccgccgtacgccgagacgctcggcgacaacctgaacctgaccatcccggcgccggggccgagcgtgatccagaacgtctgcggcggcggcgtgaggtgcgtggtggtggtggtctccgggcggccgctggtgatcgagccgtacatggacgccatcgacgcgctggtggcggcgtggctgccggggacggaggggcagggcgtcagcgacgtgctgttcggcgactacgagttcaccgggaagctggcgaggacgtggttccggtcggtggagcagctgccgatgaacgtcggcgacgagcactacgacccgctcttcccattcggattcggactcgagacccgcaaagctaattaa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0131400, RefSeq:Os02g0131400