Difference between revisions of "Os02g0138200"

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(Created page with "{{JaponicaGene| GeneName = Os02g0138200| Description = RNA-binding region RNP-1 (RNA recognition motif) domain containing protein| Version = NM_001052371.1 GI:115444112 Gen...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0138200|
 
GeneName = Os02g0138200|

Revision as of 19:08, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0138200

Description

RNA-binding region RNP-1 (RNA recognition motif) domain containing protein

Version

NM_001052371.1 GI:115444112 GeneID:4328244

Length

2901 bp

Definition

Oryza sativa Japonica Group Os02g0138200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2037530..2040430

Sequence Coding Region

2037718..2037939,2038169..2038384,2038862..2039329,2039419..2040171

Expression

GEO Profiles:Os02g0138200

Genome Context

<gbrowseImage1> name=NC_008395:2037530..2040430 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:2037530..2040430 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggcggtggaggagggaggcggcggtggtgccgtggcgcggatcttcgtgggtggtatttcggagggcgtggcggccgccgacctggaggccatgttcgcctccgtcggccgcgtcgccggcgtcgagttcgtgcgcaccaacggccgcagcttcgcctacgtcgacttccactgcccctccgacaaggctctcgccaagctcttctccacctacaatgggtgtaagtggaaagggggaaaacttaggctggagaaggctaaggagcactaccttactcgcctgaagcgtgaatgggagcaggaagcggcagcggcgcaggaaatgccagctagtgctgatgtggagagcaagaaggagaagctcgagctgaataaggctgttttggatagtacgaagattaacatctacttcccaaaactgaggaaggtgaaagccttgccttttaaaggcactggaaagcacaaatacagtttccggcatatcgaagtcccttcttacccaattcatttttgtgactgtgaggagcactgtggacctccagaggcagctaatgatgaatatgcttctgttcttgatgctgctgcatatgaaaaggagcgcagtattatgaattctgtgatgagcaagctctttgagaaggagaatgaccatttagattcaatggaaattcagaatcatggtgtcgattttgatgccgcggaaccctctaacgccaggaatgagttgcaaatggataaaagagaagaaacttctgaggaagatttggatgaccaaatggaagaaacagaagatccttctgaggaagaattggatgatctcgtgcttaacatcgtgacttgcaagccaaaaagctctgtagcacaattgaatagcgaaaagcaagcagcggataaggactcgcgcttcagaaaacgtcaacaatttgaagaatcttctctgcagaagaggcataaatcctctgatttctctgaaactagaaataggaaacagtctttccctgctatatcaggagccatccaaaatgaacaaaaatcttcagatttgtcaggaaaaggtacacatgagttctcatcagaactcgatggagataaaagttctgctagtgtccaagatgttgaagcactagcagattcttctaccagaaatgggagtgaacaaaattcgcttgctagtgaacctaaaagagtttccttgtggactcagaaatctgcctggagggatcttgttggtggcatggggagtgcatctttcagtctatcacaaatattgccaaacaccaatccagcaccaccaaaagtttcaaatgctaccgaggcctctgcttcacatgctgagtccaggacgaaagtgaaaccaagcgggaaatctttgaaaccctcggaagctgcaactcagctcttgcctgagcagaagatgcctacaagttccatggcaatgctgtctagtgagcgtaaggagaataataagctggaaaaggagagggtggttccaaagatcactattggtgaagtgtgtccgttcatgagaaattcagagtcagaaaagcaatggtcaaaggcaaagaaggttctgactggtttcatcaagaagggcaatgagagcactggatcgaatgtcgggaaagggaagccatcaacaaggagataa</cdnaseq>

Protein Sequence

<aaseq>MAAAAVEEGGGGGAVARIFVGGISEGVAAADLEAMFASVGRVAG VEFVRTNGRSFAYVDFHCPSDKALAKLFSTYNGCKWKGGKLRLEKAKEHYLTRLKREW EQEAAAAQEMPASADVESKKEKLELNKAVLDSTKINIYFPKLRKVKALPFKGTGKHKY SFRHIEVPSYPIHFCDCEEHCGPPEAANDEYASVLDAAAYEKERSIMNSVMSKLFEKE NDHLDSMEIQNHGVDFDAAEPSNARNELQMDKREETSEEDLDDQMEETEDPSEEELDD LVLNIVTCKPKSSVAQLNSEKQAADKDSRFRKRQQFEESSLQKRHKSSDFSETRNRKQ SFPAISGAIQNEQKSSDLSGKGTHEFSSELDGDKSSASVQDVEALADSSTRNGSEQNS LASEPKRVSLWTQKSAWRDLVGGMGSASFSLSQILPNTNPAPPKVSNATEASASHAES RTKVKPSGKSLKPSEAATQLLPEQKMPTSSMAMLSSERKENNKLEKERVVPKITIGEV CPFMRNSESEKQWSKAKKVLTGFIKKGNESTGSNVGKGKPSTRR</aaseq>

Gene Sequence

<dnaseqindica>189..410#640..855#1333..1800#1890..2642#aagcgattccccttcgtagttgtccgcactcgcgcgtcgctcgccggccatcgccgccgccgccgccgccgtcgccggtcgcaggcccgcctcggcctcccctgtctctgtctccatcctcgtctgccctccgcctggcgcccatcgccttccgccgtccatccgcggtgcttccgtactctgttcccatggcggcggcggcggtggaggagggaggcggcggtggtgccgtggcgcggatcttcgtgggtggtatttcggagggcgtggcggccgccgacctggaggccatgttcgcctccgtcggccgcgtcgccggcgtcgagttcgtgcgcaccaacggccgcagcttcgcctacgtcgacttccactgcccctccgacaaggctctcgccaagctcttctccaccgtacgcatcgcccccccccaatcttctcgtctctccactccagtagcagccatcaacaattcgatttctagcttatgtctgttcgtggtaggaatcctagtgtgtactagtggagatcaaattacgattaattttggatttattagatgattttacctattatgatttgtgccatgcttgctgaattgttgttggcctaagactgtttgagactgatgcttgtgtgcagtacaatgggtgtaagtggaaagggggaaaacttaggctggagaaggctaaggagcactaccttactcgcctgaagcgtgaatgggagcaggaagcggcagcggcgcaggaaatgccagctagtgctgatgtggagagcaagaaggagaagctcgagctgaataaggctgttttggatagtacgaagattaacatctacttcccaaaactgaggaaggtgagcaattggtcaggctgtgagaaacttttcttatgctcagcacttatgctgttcatgcatcattatgtgctctatagccacttagtcctgattcctgaatgggtgtgactgaacaagtaaattgtattccatccattaatatgcagaataacatgatctttgtgaactttaggttttctctatattttacattagtgtaaactgcatccttttatcagacatgctaatcatatcttttgtctttcagaatttgggctaaactaagcaggtgtaatttttaagatcaattgttgaattaagaactgaatcagaaactgggtatacattaactccttacataaacttacttggatacacatcccattgaaactatgcttgtaaaaaatgaagaggtgatatgtattgacaatgtttattcaatatgtcgattaattcctaaacatgcattgacctaatcaagatttcacttgacaggtgaaagccttgccttttaaaggcactggaaagcacaaatacagtttccggcatatcgaagtcccttcttacccaattcatttttgtgactgtgaggagcactgtggacctccagaggcagctaatgatgaatatgcttctgttcttgatgctgctgcatatgaaaaggagcgcagtattatgaattctgtgatgagcaagctctttgagaaggagaatgaccatttagattcaatggaaattcagaatcatggtgtcgattttgatgccgcggaaccctctaacgccaggaatgagttgcaaatggataaaagagaagaaacttctgaggaagatttggatgaccaaatggaagaaacagaagatccttctgaggaagaattggatgatctcgtgcttaacatcgtgacttgcaagccaaaaagctctgtagcacaattgaatagcgaaaagcaagcagcggataaggtatgcacattgcaagtatttcgaacattattctgtgatgaactactctgttgtgcagttatgttcattaacattttctgcattttcaggactcgcgcttcagaaaacgtcaacaatttgaagaatcttctctgcagaagaggcataaatcctctgatttctctgaaactagaaataggaaacagtctttccctgctatatcaggagccatccaaaatgaacaaaaatcttcagatttgtcaggaaaaggtacacatgagttctcatcagaactcgatggagataaaagttctgctagtgtccaagatgttgaagcactagcagattcttctaccagaaatgggagtgaacaaaattcgcttgctagtgaacctaaaagagtttccttgtggactcagaaatctgcctggagggatcttgttggtggcatggggagtgcatctttcagtctatcacaaatattgccaaacaccaatccagcaccaccaaaagtttcaaatgctaccgaggcctctgcttcacatgctgagtccaggacgaaagtgaaaccaagcgggaaatctttgaaaccctcggaagctgcaactcagctcttgcctgagcagaagatgcctacaagttccatggcaatgctgtctagtgagcgtaaggagaataataagctggaaaaggagagggtggttccaaagatcactattggtgaagtgtgtccgttcatgagaaattcagagtcagaaaagcaatggtcaaaggcaaagaaggttctgactggtttcatcaagaagggcaatgagagcactggatcgaatgtcgggaaagggaagccatcaacaaggagataacaacgtagcatgtcattccagcttcatcttgttgaactacaagctcggtagcatgtcattccagcttcatcttgttgaactacaagctcggtggtttcgtgtctcataggaacatgtgttattttgttgattggtctcatagtctgcctgttaagaatgatctgtctttgtttgtgaagcacaatgctatgtacgagttttgttcaaattgttattattctttgtacgagcaatttaaagtcaaacatgtttcaaaaag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0138200, RefSeq:Os02g0138200