Difference between revisions of "Os02g0161100"

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(Created page with "{{JaponicaGene| GeneName = Os02g0161100| Description = Actin-binding FH2 domain containing protein| Version = NM_001052510.1 GI:115444390 GeneID:4328384| Length = 4192 bp|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0161100|
 
GeneName = Os02g0161100|

Revision as of 19:09, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0161100

Description

Actin-binding FH2 domain containing protein

Version

NM_001052510.1 GI:115444390 GeneID:4328384

Length

4192 bp

Definition

Oryza sativa Japonica Group Os02g0161100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:3291233..3295424

Sequence Coding Region

3291563..3291733,3292082..3292769,3292847..3293363,3293438..3293637,3294137..3294372
,3294469..3295302

Expression

GEO Profiles:Os02g0161100

Genome Context

<gbrowseImage1> name=NC_008395:3291233..3295424 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:3291233..3295424 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctatgaagagagtggtgtttctgttgctgcttgtggcggcatctgcattggtgaagtcgtcaagaggaggaggaggaggggaggagaagttggggaagttctatggatggcggcgccatctttcttctggaccagctgcctcttcgttggttctcagtggggatctcgtagacaaaatatggtcagtttgcttacaagacatagttagcccagaggatacatttggctttggggaatcatttgcctgggatgagttatcgagtcattccacggaagatgaactgaaggcaacactgttcatggaacttatggctcttcttccacctgagaaatcttcttttacttatgattgtatccgtgcaaactgcttcagcctgggtgttccacaaatattcagtgttgcactgagcaactatcttgagagccagaaatcattggtcggttcaaacttctatccgagacggcgtttggtagataaactgatcggagatgctccttccatggctccagctttcgcaccatccatgtcctctggcggtgaagttcactctcccctctctgtggcggaggcaccacttacaccttccaactctctgaacatggaacctcccagcccatattatcccagtaaatctgcacacaagcatcagggagtggcacctccagtttcaccttcagaggagtatcatgactacatgaaagtagtcttgatcgctgttcttccaacagccgcactctcattcctagctgcatttctatgtttctactgctgtggatgcaacaaaagcaaggtctcggttggcgagcaacgagatgaccatcctcttcttcacttgcagttctctaacttgcctggttcgtcacctgatgtgcatgttcctgccagcccgcttcataaggatgatcatggggttaggccatccaatgctggtgtaagcatgagcaagtgctttccatgttgttttaaaacctcaagtgatgccacaacacctacactagtaactggaggaacacaggagaacaatgccacaagtgatgcccctaaactgatgcctccgccacccccacctcctccacctccacctccacctccccctccacctcctccgcgtccacctcctccgcctccacctatcaagaagggtgctccaccacctgcacctcctaaagccaccatggcaagatttcctaagctgtcacctacagagtcaagtcgttctgaagagtcatctgcaagcgagctggccagtgaatcgtctgaaactgaggtgaatgctccaagagccaagctccggcctttctattgggataaagttcttgctaatcctgatcagtcaatggcctggcatgacatcaaatttggttcttttcatgtgaacgaggagatgatagaagaattgtttggttatggtgctggcaaccaaaacaatgtcaaggacaaggaaatttccattgcagatccttcacctcagcatgtttctcttcttgatgttaagaaatcatgcaatctggcagttgtttttaaggcaatgaatgtgagggcagaggaaattcatgatgctctggttgaagggaatgaacttcctagattacttcttgagacaatcttgaggatgaaaccgactgatgaggaggaacagaaactcaggctttataatggggactgctcgcagctaggcctagcagaacaagtgatgaaggcactaattgatattccttttgctttcgagaggattagagctttgcttttcatgtcctctttgcaggaagatgcttcaagtctaagggaatcattcctccaattggaggctgcttgcggtgaactcaagcaccgcctttttctgaaactactagaagccattctcaaaactggaaatcgtttgaatgatgggacgttccgtggtggtgctaacgcgttcaaacttgacactcttcttaagttatcagatgtcaagggagctgatgggaagaccacattgctgcactttgttgttcaagagatcattcgatctgaaggtgttcgcgaagcaagactcgccatggaaaatggaagaagtccaccatttcctagtacttcggatgacaattccaatgaatctctacaggaggatggcaattactactccaaccttggccttaagattgtatcagggcttagtaatgagctggacaatgtcaagagagtagcagcactggatgctgatgctttgtctacaagtgtggcaaatctgcgacacgaattattgagagccaaagaattcctgaactccgacatggcatcgctagaagagaacagtggattccaccgctcgttagaaagtttcatagaacatgcagagactgagaccaattttctcctgaaagaagacaagagattgaggatgttagtgaagagaacgattcgatatttccatggaaatgatgagaaagatgacggttttcgcctgttcgtcattgtaagagattttctggtgatgctagataaggcatgcaaggaggttggtgcttcacaaaagaaggcaacaaataaatctcaagccaatggcaactctaataacccatcatcccagtcaaatcctcaggagcaacagtttcctgctgttttggatcatcattttgatagctcagactctaatgattga</cdnaseq>

Protein Sequence

<aaseq>MAMKRVVFLLLLVAASALVKSSRGGGGGEEKLGKFYGWRRHLSS GPAASSLVLSGDLVDKIWSVCLQDIVSPEDTFGFGESFAWDELSSHSTEDELKATLFM ELMALLPPEKSSFTYDCIRANCFSLGVPQIFSVALSNYLESQKSLVGSNFYPRRRLVD KLIGDAPSMAPAFAPSMSSGGEVHSPLSVAEAPLTPSNSLNMEPPSPYYPSKSAHKHQ GVAPPVSPSEEYHDYMKVVLIAVLPTAALSFLAAFLCFYCCGCNKSKVSVGEQRDDHP LLHLQFSNLPGSSPDVHVPASPLHKDDHGVRPSNAGVSMSKCFPCCFKTSSDATTPTL VTGGTQENNATSDAPKLMPPPPPPPPPPPPPPPPPPPRPPPPPPPIKKGAPPPAPPKA TMARFPKLSPTESSRSEESSASELASESSETEVNAPRAKLRPFYWDKVLANPDQSMAW HDIKFGSFHVNEEMIEELFGYGAGNQNNVKDKEISIADPSPQHVSLLDVKKSCNLAVV FKAMNVRAEEIHDALVEGNELPRLLLETILRMKPTDEEEQKLRLYNGDCSQLGLAEQV MKALIDIPFAFERIRALLFMSSLQEDASSLRESFLQLEAACGELKHRLFLKLLEAILK TGNRLNDGTFRGGANAFKLDTLLKLSDVKGADGKTTLLHFVVQEIIRSEGVREARLAM ENGRSPPFPSTSDDNSNESLQEDGNYYSNLGLKIVSGLSNELDNVKRVAALDADALST SVANLRHELLRAKEFLNSDMASLEENSGFHRSLESFIEHAETETNFLLKEDKRLRMLV KRTIRYFHGNDEKDDGFRLFVIVRDFLVMLDKACKEVGASQKKATNKSQANGNSNNPS SQSNPQEQQFPAVLDHHFDSSDSND</aaseq>

Gene Sequence

<dnaseqindica>331..501#850..1537#1615..2131#2206..2405#2905..3140#3237..4070#aggtgcacttgcttcagtcaccacctcctcttctcctttgccgactcctgagccatcagtgtggcctaactcgtgtgactttcaaagtaagagtatctacgacttcgattcttttattgcctttctgattaatgaatagtggtaaacgaagcaataggatttgactcctggagaaggagaagctaagatagcactgagctctttctagatacacatccttctccgcggccatttcttggagcaaatctcattttgcacagccccaaagatttcttcatctttgaaggcaaaaaaaaagatggtcctttttcgagggaaataggggggaagatggctatgaagagagtggtgtttctgttgctgcttgtggcggcatctgcattggtgaagtcgtcaagaggaggaggaggaggggaggagaagttggggaagttctatggatggcggcgccatctttcttctggaccagctgcctcttcgttggttctcagtggggatctcgtaaggcgtccataaaccttctcctttgcatgctagatagaagtaatcgattcaatagctctagtttactttgcttgatttggacttgttatctgccaagaacttcgaatatgacttccattttgtcttcttgaaagtgaggcattcaggccttttttgttatttaccgttgttatgtttagtatatttcgttataacagaaatatgactgattgtttcttgatctttattgtgctcactttagtcaatcaggatgagcagtaaattttacttagttcatatatattatatgagaacaatttaacagatagcttgatgcattaacaaataatccttactgtgatgcaggtagacaaaatatggtcagtttgcttacaagacatagttagcccagaggatacatttggctttggggaatcatttgcctgggatgagttatcgagtcattccacggaagatgaactgaaggcaacactgttcatggaacttatggctcttcttccacctgagaaatcttcttttacttatgattgtatccgtgcaaactgcttcagcctgggtgttccacaaatattcagtgttgcactgagcaactatcttgagagccagaaatcattggtcggttcaaacttctatccgagacggcgtttggtagataaactgatcggagatgctccttccatggctccagctttcgcaccatccatgtcctctggcggtgaagttcactctcccctctctgtggcggaggcaccacttacaccttccaactctctgaacatggaacctcccagcccatattatcccagtaaatctgcacacaagcatcagggagtggcacctccagtttcaccttcagaggagtatcatgactacatgaaagtagtcttgatcgctgttcttccaacagccgcactctcattcctagctgcatttctatgtttctactgctgtggatgcaacaaaagcaaggtctcggttggcgagcaacgagatgaccatcctcttcttcacttgcagttctctaacttgcctggtgaggatacatcccttctatcaacatggtagattattattggtatggtagtatatcatctatcatttgaatggcaggttcgtcacctgatgtgcatgttcctgccagcccgcttcataaggatgatcatggggttaggccatccaatgctggtgtaagcatgagcaagtgctttccatgttgttttaaaacctcaagtgatgccacaacacctacactagtaactggaggaacacaggagaacaatgccacaagtgatgcccctaaactgatgcctccgccacccccacctcctccacctccacctccacctccccctccacctcctccgcgtccacctcctccgcctccacctatcaagaagggtgctccaccacctgcacctcctaaagccaccatggcaagatttcctaagctgtcacctacagagtcaagtcgttctgaagagtcatctgcaagcgagctggccagtgaatcgtctgaaactgaggtgaatgctccaagagccaagctccggcctttctattgggataaagttcttgctaatcctgatcagtcaatggcctggcatgacatcaaatttggttcttttcagtaagtttttaaatttagcaatggcatgtattctaagttcatttaggcttgcaactgacgactgcattctgcagtgtgaacgaggagatgatagaagaattgtttggttatggtgctggcaaccaaaacaatgtcaaggacaaggaaatttccattgcagatccttcacctcagcatgtttctcttcttgatgttaagaaatcatgcaatctggcagttgtttttaaggcaatgaatgtgagggcagaggaaattcatgatgctctggttgaaggtagttgaactattgcatatatttacatgcagcctacttacccatttgccaaaaaaaaaaaaagctcctaaagtttccattatcgctgtaaatacaatatgtttgcaccgccaaagataacattgcacttataaatgagccttttgaaaaaatggaatgctcgttgcattctatttaactgatacaagaattcgactgcaactatagcaagtttacttattaaactatatactgtgcatttctaagcacatgtatttgtggccatcctcttttagtttcttgtctgtctttgtgattgtggcccatctcatttcatatcaggcaatcacagtgaaaacatgtttcatattgtgtatgcattggtcatttactatatcatatgttctcttgttcactagatgtagctgttgaggtctaagtagtacacacaaagttgatgctgtgctggttcacttcaatatacttctgacattgtcttctgtcacattatgttatgaagggaatgaacttcctagattacttcttgagacaatcttgaggatgaaaccgactgatgaggaggaacagaaactcaggctttataatggggactgctcgcagctaggcctagcagaacaagtgatgaaggcactaattgatattccttttgctttcgagaggattagagctttgcttttcatgtcctctttgcaggaagatgcttcaagtctaagggaatcattcctccaattggaggtaatccatctgaaagtagttgacttctgtattaaatctgcgaagtattccaaccttttttctccaagtgttcagttttttatctgtttgtgccaggctgcttgcggtgaactcaagcaccgcctttttctgaaactactagaagccattctcaaaactggaaatcgtttgaatgatgggacgttccgtggtggtgctaacgcgttcaaacttgacactcttcttaagttatcagatgtcaagggagctgatgggaagaccacattgctgcactttgttgttcaagagatcattcgatctgaaggtgttcgcgaagcaagactcgccatggaaaatggaagaagtccaccatttcctagtacttcggatgacaattccaatgaatctctacaggaggatggcaattactactccaaccttggccttaagattgtatcagggcttagtaatgagctggacaatgtcaagagagtagcagcactggatgctgatgctttgtctacaagtgtggcaaatctgcgacacgaattattgagagccaaagaattcctgaactccgacatggcatcgctagaagagaacagtggattccaccgctcgttagaaagtttcatagaacatgcagagactgagaccaattttctcctgaaagaagacaagagattgaggatgttagtgaagagaacgattcgatatttccatggaaatgatgagaaagatgacggttttcgcctgttcgtcattgtaagagattttctggtgatgctagataaggcatgcaaggaggttggtgcttcacaaaagaaggcaacaaataaatctcaagccaatggcaactctaataacccatcatcccagtcaaatcctcaggagcaacagtttcctgctgttttggatcatcattttgatagctcagactctaatgattgaagatagatacaatcttagatactaagatacatacattatgttagatattttatattttttcgcccgagaccatgtaaaaagtcccatttgcagaggcattgttcatacataatcacattcac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0161100, RefSeq:Os02g0161100