Difference between revisions of "Os02g0170900"
(Created page with "{{JaponicaGene|
GeneName = Os02g0170900|
Description = Lytic transglycosylase, catalytic domain containing protein|
Version = NM_001052565.1 GI:115444500 GeneID:4328445|
L...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os02g0170900| | GeneName = Os02g0170900| | ||
Revision as of 19:09, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os02g0170900 |
|---|---|
| Description |
Lytic transglycosylase, catalytic domain containing protein |
| Version |
NM_001052565.1 GI:115444500 GeneID:4328445 |
| Length |
7907 bp |
| Definition |
Oryza sativa Japonica Group Os02g0170900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:3855963..3863869 |
| Sequence Coding Region |
3857681..3857708,3857972..3858097,3858196..3858309,3858746..3858855,3859429..3859482 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008395:3855963..3863869 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008395:3855963..3863869 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggctataagcttcaaatattgggatgactgcttggatccagaggatatgcaattaatgtgggctgatcctcatgtaagtaaagagtggattgatgctggggaagggccgggacagaaggttcacctgtcacgggatcctgatggtgaggcatatctcacacaaactgaaatgatggcggtggctgcaattactgttcataagcatttcaagtcacagctagacccgtatatgataggtgcccttgcagaaattgcaagtggaaggagactctttgtcgataattatgaccgaaagactaaggagatcaaagctggcataatgcaggtgacaatagaagttgctcaatggcttggcagggaattgggttacaagtattatgacattgaagaagatgctaatttgctctattggccttttgtgaatgtctactttggtgctgcttatgcaaaatggctattctcatgtgacgataaagaaagaactgaagaattcgttgttagagcttacaagggaggcaaaaagaaggctgttcacaaatcaacttcccccatctttcaacgctatctttatgtgaaggaggccttgctgtctatgagacagccagaaagttttaatgatttaactcctaatctcctagccaattcctcgagcacagaaggacagttgatttattgggattccaaggtatcagaggtagatatggatgcgatgtggagtcagcccgatgtgattaaggagtggacaaaatctggtgagaggcgaggaaatgtgaggttttctcatgactccaagaggaggccttatctttctcgagttgaggtgaaggctgttgctgaaataaccatatcacgtcatttgagctcaaaaggagtaacaccagaagccctagctgctcttgctgaggtgtgcagtatgcgttttgtccatggtgttcgttctcgtactggcttgatgggaatagactaccctactgcagcatggctttacagagattgtggccatagggcgtatactgtcagctccgtagatgatctatacaatccttttacatcaatgtactttggcgcagcttacttgggatggttgtcacaatatgaaggaagagaaagaagtcacgagttcattgttcaggcataccttgggggaccagaaaacgttagccttcaggagactggcccattttggaacaaattcctggaggccttaagactataccaagatccaaagaaggaacaagcaagctgttgtattttgtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MAISFKYWDDCLDPEDMQLMWADPHVSKEWIDAGEGPGQKVHLS RDPDGEAYLTQTEMMAVAAITVHKHFKSQLDPYMIGALAEIASGRRLFVDNYDRKTKE IKAGIMQVTIEVAQWLGRELGYKYYDIEEDANLLYWPFVNVYFGAAYAKWLFSCDDKE RTEEFVVRAYKGGKKKAVHKSTSPIFQRYLYVKEALLSMRQPESFNDLTPNLLANSSS TEGQLIYWDSKVSEVDMDAMWSQPDVIKEWTKSGERRGNVRFSHDSKRRPYLSRVEVK AVAEITISRHLSSKGVTPEALAALAEVCSMRFVHGVRSRTGLMGIDYPTAAWLYRDCG HRAYTVSSVDDLYNPFTSMYFGAAYLGWLSQYEGRERSHEFIVQAYLGGPENVSLQET GPFWNKFLEALRLYQDPKKEQASCCIL</aaseq> |
| Gene Sequence |
<dnaseqindica>6162..6189#5773..5898#5561..5674#5015..5124#4388..4441#3734..3903#3490..3548#2702..2824#2480..2596#2259..2389#2100..2150#1389..1565#gttgtataccaaacggcaatacgcgcctctctctctctctctctctctctctctctcccctccttcccttccctctctctctctcctcaattccccattccaccaacgcacgcaccaacccgccattccctcccaaaaccaaatcccccgtcgacgcgagaggaatccaatcctccgaatcgtctcccaatcccgcgcgccggtgagctcccgttccgatcccgcctcagttttttttttcattttttttgcgctttatttggtgatccagcgcgcgagcgagcgagcgagcgaggcgatgatttttggtgttttttttggatggggagcatggagttcatggatgggatcgacggcgttcgtcgtcgcgtctagtctcgtggtggttcggcgaatgcggttgcggctgctgtttgtttgttgcgggtggtctcgctggacgcggaggcgtgcgcatgacgctatggtgttttggtgtgtgggcatctggttccgtgacgcggcgatgctgctgctgctgggttggggtgaccattcaatttgtgtggctatcggattctgcgtttttttttttgggttgtgtatgcgttgcttcatcatgcaggcatgcggttgtttactgcctccaatcccatggtcgatttcatgattccggtacttgttagtgtcgtgggattgtgcatacatgtgattttgaggtgcgttgcggtggaaggcagtgatcatgatttataaggtgtcatgcgcctgtggagtggaagtagtttttgtcaattcggtcgtaatatgaatagttcggtgtaacatggttgagaaatttcagagggttgtgtatacagtgcctctggagttgattctgctgatttgtttctggggtgaattgccccggttatatgtgcttcatgcgtctctgatgattggtttggttgtgttgtggtttgatcatgaaccctgtttgcttcttttttgggtgatgagttcagcatgcagttctggggtgacttatcctgtaactgtgattgaagcaattatttctgtcacttttcagtgattactccatgttgttgctatgagctcaaattgaatgcatagttggttgtagaagcgcggatgcttttcgcatctattacgatgcaatcagaacatattcttattgtttgctcacttcttttctttttttgtttttgttttggcaacgttcccattcctaattatttgatggcttctaactgttcaaaattccatcaccctctatgtcaaccctgaacaaaatgcagattggcacattggatttccttttgctttaaggaagttatcctattgcatataattttcatatttgttgctcccagtgtagatcgacagatacaattgctaattagtacaaaatggctataagcttcaaatattgggatgactgcttggatccagaggatatgcaattaatgtgggctgatcctcatgtaagtaaagagtggattgatgctggggaagggccgggacagaaggttcacctgtcacgggatcctgatggtgaggcatatctcacacaaactgaaatgatggtgagtgatcagctgtagccagtgtatcttgacatctaaaacctgcattagtggcaatcaaaccaaagttcatgtcattatctaaaaagaaaaaaaaccaaagttcatgtaaatcattgtatttattttttcgcaagctgtatttctgtacgtatcgtgtctattttttgagcagtttatattatacttggttgttacttttgaacaataatttccttgtacctatgctgtagtggcgttaaatgcaggttatactagtgccagcaaattgattcaccgaagtttaaacaagacaaaaatcaatcagtgctgtgagttaagagtctaacataatagtttttacctatatttatccaagtgactaaattactgttgacaactttgttactgctgcgctgatctaaacaaattttcgaagctatggaaacaataacaaattaagggtcctttgctttattttctttttcaaaactgtacttgttatctacttatctgtacaattttggcttaaaactaaattcattgattcttcaggcggtggctgcaattactgttcataagcatttcaagtcacagctagacccggtattgcttcttttgctttatgacttatcaatatttggatttgtatatgtatcaaagacactgctgaagtacattaaacattattttttactttcatcactcatgcagtatatgataggtgcccttgcagaaattgcaagtggaaggagactctttgtcgataattatgaccgaaagactaaggagatcaaagctggcataatgcaggtgacaatagaagttgctcaatggcttggcaggtaccatgaaaccttgataacccagatttagtaactatcttttcttctatgttttcatactaaatatttgttttctttacctttaacaagggaattgggttacaagtattatgacattgaagaagatgctaatttgctctattggccttttgtgaatgtctactttggtgctgcttatgcaaaatggctattctcatgtgacgataagtatgtattttgattgtcagattatgcttgaccattgcaattaatttcctttgacatattttatcttctactgccaaacataattacttgccaaaaacacttcagagaaagaactgaagaattcgttgttagagcttacaagggaggcaaaaagaaggctgttcacaaatcaacttcccccatctttcaacgctatctttatgtgaaggaggccttgctgtctatgaggtttcacccttaataatttatttccatattcagcttctaactttcttattctgtgaaaagtgtgccttaagcactaaacaaattcgtttctcttagcacctgtgaacctccaaggtccaattttagaggtattgaggttatttggaagcctagcaaacctttaagttggagaaaattggtttgaacttctcaaaacaactggccattgaagatttgaggtaaaaaacctaaaattttacttatgacatgtcacataatttaaagaacagtagttttcatctcaagtttgaacccctgaacctgacccctgagctgtgctatgtggaccttctatgctggcaggttaaacacatgatggacagcaatatgtttagtgactttctttactgtaattcatgctcacctgacctgtcgaaataccaagttaattaaaacactgatatttcttaattcaaacatgagtgtttcttgatggttgcatcatttgctcggcctctcaaatatattcagaatttcaagctcttctgagttttccgttagggttagaaacatattcaatggatcgaaatccaaaagttatgtttgtagaggagctattattttattttactttagttccagttctgaacttgctgacaaactgcttcttgctattttgtctgcagacagccagaaagttttaatgatttaactcctaatctcctagccaattcctcgagcacaggttaaattttactgtgttacctttttatttatttaaataattttctgctattcaaggtttgtggtttgtcgagatgttagcaaatactaggttatgattttaggatgttgattcttgttttgattccagagaattgatatgcttctaacattcaagctgacatcttgttatcacatttgagtcagaaggacagttgatttattgggattccaaggtatcagaggtagatatggatgcgatgtggagtcagcccgatgtgattaaggagtggacaaaatctggtgagaggcgaggaaatgtgaggttttctcatgactccaagaggaggccttatctttctcgagttgaggtgaaggtaaaagatgattctttaaattttttgtagttactttgcatttgcagtatacgggccacctttttttaccatgctaaaatgttgacatacatatgtttttgtgtaaagctaccactataatcttattaatattcttgtgctgttaaaattgcatccttgatttgatcaagtgaactgctcgtgtggatggcatgtaataaaatcaactttgtagtttgtaggtgtggctgcagtgctatacatttcctatcatgccatacaaattacatggacaaatattgttcacagaagcattacttatacttggtgccatagctattccttctttttggaacaatcccagactcatgccttgtttgatacaataatcctatatctgctcaccagtaaaatgtcttgcaggtttcatgtatttgttattttattcaccaatacttaatttccatccatctcagacttacgtggttgtaaatttttttctcaggctgttgctgaaataaccatatcacgtcatttgagctcaaaaggagtaacaccagtaagtttttttgtttataaatcagtgaacatatagtatctgtataatgatactaattatgtattaaatttgttgttttatatcgctttctgtatcacctataacatggccctcccttattttaaatatgtgatgaggccaacatttaggcaaactgaagaaattcttttggctcttaacctatttgctttgttgcatggtattgcttttctaagtcatacatttagtactttagcatgattatccatcacatcagtgctgatactcatcttgttctttttttacataaaactcatcttattttggttgtcgattcatgtaacatcattgcattagttaatggatttgttgtatattttgtcaacaaagcattttctctattttgtggatattctaaaattatgcaaatgtcc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