Difference between revisions of "Os02g0176100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0176100| Description = Wilm's tumour protein family protein| Version = NM_001052596.1 GI:115444562 GeneID:4328477| Length = 7190 bp| Defin...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0176100|
 
GeneName = Os02g0176100|

Revision as of 19:09, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0176100

Description

Wilm's tumour protein family protein

Version

NM_001052596.1 GI:115444562 GeneID:4328477

Length

7190 bp

Definition

Oryza sativa Japonica Group Os02g0176100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4167832..4175021

Sequence Coding Region

4168164..4168250,4168672..4168828,4168951..4169090,4170318..4170456,4170562..4170830
,4170914..4171296,4171399..4171455,4171544..4171950,4172105..4172170
,4172764..4172829,4172906..4172977,4173150..4173221,4173299..4173370
,4173454..4173519,4173717..4173785,4173866..4173995,4174846..4174981

Expression

GEO Profiles:Os02g0176100

Genome Context

<gbrowseImage1> name=NC_008395:4167832..4175021 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4167832..4175021 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggatggcagcgggagggaggtgctgcttccggagaggggctcccgcggcggtgctcgtgctgccgctgctgctgctgatcgccgcggcggcattgccccggcgggcgctcgcggccaccgtcgccgccgatgttgctgctataaatggactgtatgttgcacttggatcaccggctcttcctaaatggactgcgaatggtggtgacccctgtggtgatggttggcagggcgttgtatgtattggctcaaatatagattcaataattttcaatgctgcaaatttggaaggacagttaggcagcctggggaacttcacttcaataaccactataaatcttagcaacaacaatattggtggaactataccagaagatctacctgttacactgcagcatttttttatgtctgataaccagctcactggaagcattccgacgtcactatcaatgcttcagagtttaacagacatgtctctaaatgataatcatctcgacgggaaactgccagatgcttttggttcccttactggccttgtaaattttgatatttcatccaataacttcagtggttcattaccaccttctctgggaagcctgtcatcattgactacattgcacatgcaagacaaccaactatccggaacccttgatgtcttgcaggatctccccctcaaagatttaaatatagagaataatttgttttctggaccggttcctccaaagttgctgaatgtgccaaacttcaaaaaggatgggaacccatttaataccagcatagctccttctgcatcaccctcttcaacacctacaggctctacaccaacacaaacaccatcgtcaccttcatcttctggaactccttcgccatctagttcgccctctaattcttctggtggatctactgctcgagacagcagctctccatcatctaggaaacataagtcttcaaccctcaggattgttggatatgttcttctagctattgtcctgtttatagttacagtgctgctggtaatattttgcctgtccaagtaccaagagagacagtcaagacgtgattatacaacaagtcaggtggggagggttcatcagagggttgaagagccgaaagttaagcaagcttcagtgcagtcaaggaatgatgccaaaaaaggatcaacagaggttcctgaacggaggcaggttcgtgaaataaatttggcggtaccagctgctctcgagaagcctcctgaaaagagaaaagaacatgtaattaacttgcagcgatcagaaacagaaatttttgcttctacacctccgccgccgccgcctccaccaccaccacctcctcctcctcctccgacaccaccaccgccaccgccgcggccgccgccgccgccgccaccaccaccacctgttgaaaaagtgattgtaaatcccattgttaagccagagaaaagagttagtactccacctaggacaggtccctcgacatctgcaacatccttttctgttgcatcacttcagcaatatacaaatagttttgaagagggaaatttgataagagagagtaggttgggaaaagtatatctggcagaacttcctgaaggcaggttcttggaagttatgaagattgataacgccaatgatagaataccggtagatgaatttctagaactggttgcaagtgtatcagatattaggcatcccaacatcctcgagcttgttggatactgtgcagaatatggtcagaggttacttgtttataatcatttcagtagaaaaacactgcatgatgtactacatgaaggggaggaattggatggtgcactatcatggaatgctcgcctccaagttgctcttggtgcagcaaaggccttagactatctacatgagagctgtgaacctccagtagtgcaccagaattttgagccagccaatgtgctccttggtaatggattctcagtacgtgtcgctgaatgtggactggcagaattgacgctgtcaggttctgttacacagttgtcaggtcgcatgagggcactgctgaattatgaagctcctgaaatccatgaagctgggacttttacctaccgaagtgatgtttacagttttggcgtggtaatgctagaacttctcactggccgtaaaccatatgacagttctcgtcctcgtgctgaacaacatcttgttagatgggctgattctcaatttcatgacattgagtccatatcaaagatggttgatccttctattcaaggagagtgttctgagaaagtactgtcacgttttgcagacatcatcagccgttgtattcggccggaaccagaattcagaccatcaatgtcagagattgtccaagacctagctaggattataagtgttaccagtgaggaatcagagtaa</cdnaseq>

Protein Sequence

<aaseq>MRMAAGGRCCFRRGAPAAVLVLPLLLLIAAAALPRRALAATVAA DVAAINGLYVALGSPALPKWTANGGDPCGDGWQGVVCIGSNIDSIIFNAANLEGQLGS LGNFTSITTINLSNNNIGGTIPEDLPVTLQHFFMSDNQLTGSIPTSLSMLQSLTDMSL NDNHLDGKLPDAFGSLTGLVNFDISSNNFSGSLPPSLGSLSSLTTLHMQDNQLSGTLD VLQDLPLKDLNIENNLFSGPVPPKLLNVPNFKKDGNPFNTSIAPSASPSSTPTGSTPT QTPSSPSSSGTPSPSSSPSNSSGGSTARDSSSPSSRKHKSSTLRIVGYVLLAIVLFIV TVLLVIFCLSKYQERQSRRDYTTSQVGRVHQRVEEPKVKQASVQSRNDAKKGSTEVPE RRQVREINLAVPAALEKPPEKRKEHVINLQRSETEIFASTPPPPPPPPPPPPPPPPTP PPPPPRPPPPPPPPPPVEKVIVNPIVKPEKRVSTPPRTGPSTSATSFSVASLQQYTNS FEEGNLIRESRLGKVYLAELPEGRFLEVMKIDNANDRIPVDEFLELVASVSDIRHPNI LELVGYCAEYGQRLLVYNHFSRKTLHDVLHEGEELDGALSWNARLQVALGAAKALDYL HESCEPPVVHQNFEPANVLLGNGFSVRVAECGLAELTLSGSVTQLSGRMRALLNYEAP EIHEAGTFTYRSDVYSFGVVMLELLTGRKPYDSSRPRAEQHLVRWADSQFHDIESISK MVDPSIQGECSEKVLSRFADIISRCIRPEPEFRPSMSEIVQDLARIISVTSEESE</aaseq>

Gene Sequence

<dnaseqindica>6772..6858#6194..6350#5932..6071#4566..4704#4192..4460#3726..4108#3567..3623#3072..3478#2852..2917#2193..2258#2045..2116#1801..1872#1652..1723#1503..1568#1237..1305#1027..1156#41..176#taattgctggaggggagagagagagagagagtttgcgtcgatgcggatggcagcgggagggaggtgctgcttccggagaggggctcccgcggcggtgctcgtgctgccgctgctgctgctgatcgccgcggcggcattgccccggcgggcgctcgcggccaccgtcgccgccgatggtaagtgctccgcgctcgcgcttcgtgcttggatgctttgctcgtacgtgttgcactagcttttggttggtggccgttggtcgttgcactgtttgcggaggcgatgattcgagctaagtactgttcggggtgaacatgggatttgtcggtggaagcgaggtcaaggtggggattgatttcgatgcagtgctgtactgtgcactagagattgggcgggtggtgagaaacgtgtggggggtttaggttgggtcgatcgattcaatttgattgtgcggattggcaggggatatcttgcggtacttcttcttctggacttgatgcggcggttgaattttcgtgtgcttttgcttgtggaagcaaatgaagtggttaaatgctgcaatcgagctgctattttcggtctgaagggatgttttaggattgttatgtgaactgttctctttggattagtaatcgtcattattgacgacaatggttgatggataaagtgatggatgatttagttaggctagttgtggtagaatgagaaatggtcttattattactctcgcttacatgaatctttaattaaaaagttcctttcaaactgtttgcataaaaaggggtcttagttgtaaaaagtcggctgaaggtgatatgatgactaatttccactctcacccttggtttttggtgaaatgctgggttctgttttacctgaattaactggcccatttgcacactctgcactctacttactatgtaggttcatttcattaagtaccttaaaatggtgttgatttggtgtgaatccatgtcagggataattatgtttgttactaatgactgtttttgcttgatttatgggcagttgctgctataaatggactgtatgttgcacttggatcaccggctcttcctaaatggactgcgaatggtggtgacccctgtggtgatggttggcagggcgttgtatgtattggctcaaatatagattcaatgtacgtccattgtacatttgcatttcctttatctggtcgagtgtttatattttgtgcttttatcaactcattgtttgtagaattttcaatgctgcaaatttggaaggacagttaggcagcctggggaacttcacttcaataaccactatgtaagagtattactgttaattttattctctttgcccatgattgatccttgatcgtcatgtcatctaattatacatgcatagtaattaatagatcaataggaaattcaaagtctgtacttatatattggcagaagttatgttgttttcgtatgtatcctggtcaggttttgtgactatttacttttctttcattgtagaaatcttagcaacaacaatattggtggaactataccagaagatctacctgttacactgcagcatttgtatgtgctattcttcctcttctggaatttttttagctcttgtgattgagtgatgagatgccttatgttccttgctggtgcagttttatgtctgataaccagctcactggaagcattccgacgtcactatcaatgcttcagagtttaacagacatgtatgactattgtcctatttctgttcctaagcagagaggttgctgtactattttttttctgatctgtctttttgtaggtctctaaatgataatcatctcgacgggaaactgccagatgcttttggttcccttactggccttgtaaatttgtaagatacctcattttcctctccttttcattttgcttattcttactcttcatgtgcacttgctcatgcacctgagagtatatcatatcttcattttccccaagacccgagagggttggcaggcaaggggtgaactgttaactcgttcataacatctagcatttgaccacagtgatatttcatccaataacttcagtggttcattaccaccttctctgggaagcctgtcatcattgactacattgtaagtctacaagtattttcttatatagttttttccctatcatttttacttattttcatgccttgttattttacaggcacatgcaagacaaccaactatccggaacccttgatgtcttgcaggatctccccctcaaagatttgtattcccacactctctattctgtcatcatattactgattcacttttattagtacaccattatgtataaattggacaatcagcaattgtattctcagttatgtgttgatttataaaattgatctgcttaacagacattttcttctggtctactttagagatgtcatagtataaattatgattatcctgcactttgtcattattttgaagtaacatgcaacaatatgttagcagacacaaagttctctattattcaacagtcacattgaatttgataaggttgtagaaacttgacatcctttcacaaagtacatggcagtcatacatttgtttgcagaagtataatgtaccatgtagtcatgaccagaaccgggacttttaggttttaacaaagctgtactagttagaaaaaagaacaggtgatgtaagtgatttagcttttatcttatcatagacattcacaagtcaaacagtaatttaaatccaatttgttatgtatgtctaatccagatcatcctttttcttagaatgctgttatgcatacaaatatgaaatatctacacttgtttctgataatatatttacctgaaacagaaatatagagaataatttgttttctggaccggttcctccaaagttgctgaatgtgccaaacttcaagtgagaatcctttttcttacatatttcaaatttattgatgcaattcacatagtacttggtattcctacataaaaattctctctactatatacttttgccatatgtaattatatgtaaggtaacttattgagtaattcattgtttttgtctacagaaaggatgggaacccatttaataccagcatagctccttctgcatcaccctcttcaacacctacaggctctacaccaacacaaacaccatcgtcaccttcatcttctggaactccttcgccatctagttcgccctctaattcttctggtggatctactgctcgagacagcagctctccatcatctaggaaacataagtcttcaaccctcaggattgttggatatgttcttctagctattgtcctgtttatagttacagtgctgctggtaatattttgcctgtccaagtaccaagagagacagtcaagacgtgattatacaacaagtcaggtggggagggttcatcagagggttgaagagccgaaagttaagcaagcttcagtgcagtcaaggaatgatgccaaaaaaggtcaacaattaatttatatattctgtaatatatttctgattatattttatttgttttatatcacagcatattgatgttctattaacaggatcaacagaggttcctgaacggaggcaggttcgtgaaataaatttggcggtaccaggtatagatgcttgtaaatctgatctatcaggtcttttagtactgtaatactattcacatttttaagttcagatgtataaaataactattcaattgctggcagctgctctcgagaagcctcctgaaaagagaaaagaacatgtaattaacttgcagcgatcagaaacagaaatttttgcttctacacctccgccgccgccgcctccaccaccaccacctcctcctcctcctccgacaccaccaccgccaccgccgcggccgccgccgccgccgccaccaccaccacctgttgaaaaagtgattgtaaatcccattgttaagccagagaaaagagttagtactccacctaggacaggtccctcgacatctgcaacatccttttctgttgcatcacttcagcaatatacaaatagttttgaagagggaaatttgataagagagagtaggttgggaaaagtatatctggcagaacttcctgaaggcagggtatgtttacaaaatactgcttcatttaaatggaattttatgattattgaaatgctatactaatcttcctttatcctatgcagttcttggaagttatgaagattgataacgccaatgatagaataccggtagatgaatttctagaactggttgcaagtgtatcagatattaggcatcccaacatcctcgagcttgttggatactgtgcagaatatggtcagaggttacttgtttataatcatttcagtagaaaaacactgcatgatgtactacatgaaggggaggaattggatggtgcactatcatggaatgctcgcctccaagttgctcttggtgcagcaaaggccttagagtaagttaccaagctgtatcgcggttcaatataattaccatgaacttgtgcttatttaatttagtttttcatggggtagcttttgtacttatattcttctttcagctatctacatgagagctgtgaacctccagtagtgcaccagaattttgagccagccaatgtgctccttggtaatggattctcagtacgtgtcgctgaatgtggactggcagaattgacgctgtcaggttctgttacacaggtaacatctagtgttgtacaccaaccttgtggttgtgatacttcggcttttccgtcgcaagcagttctgatacatttcctaaaattcctgaagtccaattaagaagagtaaatttcagaaaactacatatactttgatcaaactatcacaaaactatagatttaaggcggtgcatcacaaaactacagatttaggaccgaatttatcaaagaactagagatttaagatggaagaccaccaaactacatatttagtaataaaatatcacaaactacatgttttgtagcaagttaagtactacctccgtttcaggttataagactttttagcattacccatattcatatagatgttaatgaatctaggcacacatatatgtctagattcattaacatatatatgaatgtgggcaatgttagaaagtcttataatatgaaacggaggaagtacaaaactataacatttataactcttaacatgatagtagtggtagggatttaaattgtaaaatatgtagtttcgtgataactctagtattaaagctgtagttttgtgatatttggccttaaatctgtagttttgtgataaaccgtgtgttaaatacttaaatctgtagttttgtgatacaacaccttaaatatgtagttttgtgataatttaattaaagtacctgactatctgtagtgttgtgaatactactctttataatttgactgcatacgagtaacaatccagtattcaagcacctaagcagctctcagggcatgacagctactaggtccagtgctacaacttccttccaaactagagcagccttatccacatatttactatcgcaggaaagactattgaaagaagggggttaaaattttatttatcttaagttttagattagttatgttgggccttccagctaccagcctaccatgcacatccaccacagcagtagaactcgcctcaggcctgaaattgatggttgttccctcgatttgttcataaggtgttgtcttttggttaggattattttcagttaagaagcttttagctgatgtttttaggagctggttcatttaagggctttaacaaatatcagttaagcaagcaaagaaacaagcaagttcgttcacatctctggtctggttgccccattgcatctcctaatgaagccattgctgcaaggatgtcctctctgtggttttaacttagaatggtgttcttttattccagttgtcaggtcgcatgagggcactgctgaattatgaagctcctgaaatccatgaagctgggacttttacctaccgaagtgatgtttacagttttggcgtggtaatgctagaacttctcactggccgtaaaccatatgacaggtcagtgattcaccgtaatatgcatttcttaattttagtttcataattgtgttagatcaattgtctccaaatgttgtctgaactttctagtttgcttgcttattttccgttacaatatgcagttctcgtcctcgtgctgaacaacatcttgttagatgggctgattctcaatttcatgacattgagtccatatcaaagatggttgatccttctattcaaggagagtgttctgagaaagtactgtcacgttttgcagacatcatcagccgttgtattcgggtaatcaaatacttccattatcttttgagctaaactgtagtttctagtttctagcataatataagatagtacatgtgtcacttccttaagcatctctatcaggattttatgccagaattttctatagagagctgtttaattaggctaaaagcatcaactatctaaatttcctattagcccattgcataattttacttcattattgaggtcaaatgcattctgcaattttatatccaagttattatatcacaaattaatttgtttagtcattttgatacttaaatcacattcaggtaatatacttgtttatctgttcactatgctctgctctgcttgtgttgtttttcttttctgagaacagccatatgagatggatttaaaaatcatgtgattgatgaatgatctgaaatttcttatgcagccggaaccagaattcagaccatcaatgtcagagattgtccaagacctagctaggattataagtgttaccagtgaggaatcagagtaacgaagagatcaaggtggggccgtacatctaggaagccagctctcgcagctatcaaaaatattcagaggaaacacaatcatttctgtggagcatcctttcagtatttataatggacagcattgtcctttagtgtacatgttgattctggagccgcatttacctgttgaaaggtggtagtggtacagccaggggaacatgggccttctcattatgggccaagtagattcctgtacttcctagacattatcaaattgcatgtatatcttataatccattctaattttgattattttattacattaaaattagcgatgttcatatggtgttagcat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0176100, RefSeq:Os02g0176100