Difference between revisions of "Os02g0177500"

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(Created page with "{{JaponicaGene| GeneName = Os02g0177500| Description = Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)| Version = NM_001052603.1 GI:11544...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0177500|
 
GeneName = Os02g0177500|

Revision as of 19:09, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0177500

Description

Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)

Version

NM_001052603.1 GI:115444576 GeneID:4328484

Length

3580 bp

Definition

Oryza sativa Japonica Group Os02g0177500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4270617..4274196

Sequence Coding Region

4270808..4270871,4271548..4271612,4271717..4271754,4272060..4272147,4274134..4274139

Expression

GEO Profiles:Os02g0177500

Genome Context

<gbrowseImage1> name=NC_008395:4270617..4274196 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4270617..4274196 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgactgtgccagttaacccgaagcctttcttgaacaacctgacagggaagcctgtcattgtcaaacttaagtggggtatggaatacaaaggatatcttgtttctgtcgactcttatatgaatctgcagctggctaatacagaggagtatattgatgggcaattctctggaaacttgggtgagatactgataaggtgcaacaacgttttgtatctccgaggcgttccagaggataccgagatagaggatgcggaatga</cdnaseq>

Protein Sequence

<aaseq>MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQ LANTEEYIDGQFSGNLGEILIRCNNVLYLRGVPEDTEIEDAE</aaseq>

Gene Sequence

<dnaseqindica>3326..3389#2585..2649#2443..2480#2050..2137#58..63#ccctacgcatccccgaccagcaccggcaccggcggcggcggcggctaccccccttcaatggcggtattgccctcatctctctctctctctctttctccctcgatattactccgcgaaattgtttatctcgtgtagtggatctgtttacgcttcgaatgtttttttttgtcgcgtgatttggtgccaactgttgtggtagtctcgtagccgtagcttcgtgtgctcgattcggagtaggtggatatagattggagggcttaactgttctaggtctatgacctccaggatagataggtcggatgtgtgatttgggataggtttcatgtcgaattgtggtgagggaaaaattgaagtatttagaaaatcccccaaaagttcgttttggggttgtagagctgcttgtttcttcttcttcttcttcttcttcttcttcttctttttctttttgaaacccctagagctgcttgtttcgaagatgtggtttgagttatggttatcttttatggcgcaggagtgtaagtttggacccttgcttagctttcaggttgaaagaacgatggatgtagagctgtttgtttggttggaagatgtgctctgattttctttttttatgcggcacacgaacctccctagttatcctcaagtcatggtagatcagtccgaaaacgggacgggatgggccaacccgtcacctataccctctgccccaatttagatgggaaccacttggaaaccagggagaaaaattggcccgtccctcttgcagtggaactggctggccccattaggttctgcaggactgtgcactagttcaggctgcagcgcatgcaaagtgcacactaagcatcacacagaaattcagactgacaagttgataatagaaattgacagattgatagctgaataattcagaacagaaacagaaagcgtgccagattgaattaaaaccagaaaatagaaatttcaatccagaaatttaacaaagatacatactccctccatactcgtaaaggaagtcatttaagacagcgacacggtctccaaaacacaactttgacttcttgtttctataaaaatatttattgaaaagtgatatatgtatacttttacgaaagtatttttcaagacaaatctatacatataatttttatattttcaaactcaacaacttgagagttattcatgatttatattcccaaagtttgacttaaacattgtcctaaacgacttcctttatgagtacggagggagtacaactccattaattttctgagatgttcagatcagaaactgtgattcctttacgcatatcactagcacaactgccaaaaatcgaattgaacatcagaaaaatccatggattgtgataaaatgaaattcaatatttcagagtaaaagaagagtttgaatgggaagcacacacttgaatctgccatgctgctcaagatgcaagaacaagaagtgttcccattccttgctcactattctgactggtacatcagtatgggctgaagaggaaagggcatcttcagcttaatcttgtaaaaaatatttgaaacttgacaactcagctgttcacatcaaggttctctatgtggactatgctttacttgaattggagcttcagaagagcattgaggaactattgtatccctctttgagtggggaaaacaaagacaatgacccagtggtctaaatgtcatgcgttgcccctagccggtctgtcctggattggcttctgcctgtctcttgttaggcctgcgtaatcagttacggtatgtagctgctggtctgtcggctgagtagggagtagcacccagcgtcttgcgctaattagggcttcaacacatcagtttggtgttctattgctgcagataattgcaaaacaaacttgatttgttacagacattgtactgacctgactagtatttgttttcttctgattttcttcatgatgattattcatggtattcagttccaagtggtgcctccatatacatcttgtctatactcttttatatactattaatggattgtttctaaatgcagactgtgccagttaacccgaagcctttcttgaacaacctgacagggaagcctgtcattgtcaaacttaagtggggtatggaatacaaaggtaatctatacttttacccgtcacattttattcactgatatgcttaggctagtgattgaaatttcagaatgaaatctctgaggtttcaggaacattgaaatttgtccagtttttacatgaaatttcttgcttccatggacaattacttcatggcacttatcaagaacatccactttcattggttttacaatggaacttcaatggaaatcatgtgttaaaatgggtcctcttgttgtaatttagttttcagactgtgccttattatcgattatgctgacgatactctttttgtacccccctttcaggatatcttgtttctgtcgactcttatatgaatctgcaggtattattttgtattttgtatcagttaaattcgttcatttaccaatatggatcgacgtgtcatcttcttttgctgcaatttacctaattgtctactgctttcagctggctaatacagaggagtatattgatgggcaattctctggaaacttgggtgagatactgataaggtaactctatatatcgcccttcagtcctggaccagattcatctgtagttattggcttaccgctggtacttatgtactcataggtgatctgttggttacttgcatgctattaccctgttttcagtctgactggtaatattaagagatagaatgatagtatggtaaaatgtggagagatagaatgatagagttcagagtatatggaatttactcaaatgcagaagtataacaagtagcagcgcttataacttgggaagtcttttgctgactaaatcgttaaagagcaaccgcaatgtatactaccaaagtggataataacgtgggcctggggttcaggtggtaacagttattacaaagctcacaatgtgctatgcctattctgcaaattaaggtggggtccaccttaaaaagaatcattgtaaaactatctcctatagccatgctcgtacaaaaagattcccatatctacagaaaatattgttctttattctcttgttaccggcagtagcacaatggcccggtagtagttattgtctctacccacaatgcttcttacctggttataagcctatattaattgcttgttacctgcttttgttcaacattgtggttgcccacaaaacatattcaattgtctgatgtataattcttatttgtttcatttgtgaactgtacaggtgcaacaacgttttgtatctccgaggcgttccagaggataccgagatagaggatgcggaatgagatagcccgggccatgtccagattgattattgtaatatgctgctgacatgaacaattaagtgtcatgtacaactgatgcagattgacctggatctttaactatgccatgatatggtaatgttatgcgttgaaactgtcgttgctcggaatgtgtgagatcatatttcgtaagaaaataccatttgcctgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0177500, RefSeq:Os02g0177500