Difference between revisions of "Os02g0180100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0180100| Description = Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 family protein| Version = NM_001052624.1 GI:115444618 GeneID:4...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0180100|
 
GeneName = Os02g0180100|

Revision as of 19:10, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0180100

Description

Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 family protein

Version

NM_001052624.1 GI:115444618 GeneID:4328506

Length

2717 bp

Definition

Oryza sativa Japonica Group Os02g0180100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:4454991..4457707

Sequence Coding Region

4455151..4455915,4455999..4456098,4456176..4456222,4456566..4456612,4457299..4457329

Expression

GEO Profiles:Os02g0180100

Genome Context

<gbrowseImage1> name=NC_008395:4454991..4457707 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:4454991..4457707 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttgggctgcaatcgagaatgatcctggcatttttactgaactgttgcaacagatgcaactgaagggtcttcaagttgatgaactctattcactcgatctggatgccctcaatgatcttcagccagtttatgggctcattgtgctgtacaaatggcaacctccagaaaaagatgagcgtcctatcaaggacccaatcccaaaccttttctttgctaagcagataattaacaatgcatgtgccacccaagctatcgtttctgttctattaaactctccgggtatcacccttagtgaggagctcaaaaagctaaaggagtttgcaaaggacttgccaccagatctcaaaggattggctatagtcaattctgagagcatccgtttggccagtaattcatttgcaaggccggaagtccccgaggagcagaaatcatctgtcaaggatgatgatgtctaccatttcattagctatgttcctgtggacggtgtcctgtatgagcttgatgggctaaaggaagggccaataagcctggggaaatgcccaggtggcgttggcgacataggttggctgaggatggtgcagcctgtcattcaggaacgcatcgatcggttctctcagaatgagataaggttcagcgtcatggctatcctaaagaaccggagggagaagttcactttagaactcaaggagcttcagaggaagagggagaacctcctggcacagatgggtgatccttccgccaataggcacgcgccatctgttgagcactctcttgcggaggttgctgctcatattgaggctgtaacagagaagatcataatggaggaagagaagtggaagaagtggaagacagagaacatcaggaggaagcacaactatgtgccattcttgttcaatttcctcaagattcttgaggagaggcagcagttgaagcccctgatagagaaggcgaaacagaagtctcacagctctgctaatcctaggtga</cdnaseq>

Protein Sequence

<aaseq>MSWAAIENDPGIFTELLQQMQLKGLQVDELYSLDLDALNDLQPV YGLIVLYKWQPPEKDERPIKDPIPNLFFAKQIINNACATQAIVSVLLNSPGITLSEEL KKLKEFAKDLPPDLKGLAIVNSESIRLASNSFARPEVPEEQKSSVKDDDVYHFISYVP VDGVLYELDGLKEGPISLGKCPGGVGDIGWLRMVQPVIQERIDRFSQNEIRFSVMAIL KNRREKFTLELKELQRKRENLLAQMGDPSANRHAPSVEHSLAEVAAHIEAVTEKIIME EEKWKKWKTENIRRKHNYVPFLFNFLKILEERQQLKPLIEKAKQKSHSSANPR</aaseq>

Gene Sequence

<dnaseqindica>1793..2557#1610..1709#1486..1532#1096..1142#379..409#gtccaatctcacccatcgccgacgacccacgcacgcagtccaccaacgcgccgccgccgccgaatccgcttcgctccctccgccgcgccgcgcgccacctccgtcgacgctggcccgacgcgcgcggttcgtgaaggaggaggaggaggaggagcttctgccgggtcggaccgtcggtttctctcgttggtaggggaagaagccctttggttggatttgtttcttctttcgtctaatttggtttagctcaagatttggtttcttgcagcagcaggcagctcttgtttctccataacttctttgatgcttcaatttaatttgatacgcgaaattatatctgcagacctgcaggagggtgcgcagggtttcttcttcgacatgtcttgggctgcaatcgagaatgatcctggtaaaattcaattacctttatggagtagaaatacaaaagaagagatggattgtagtatatgaacaattcaactaggctttctctgcgcatccgtggaggagtttcgctaccttccatttgtgactttcattcaaattctgaattttcggcgactcgactctatacattgttttgttgtttagaatttgttttgtgttttaataaacaactactaccagtagtaagtagtaccactttactcatcacaagattggagagaactcctcctgaagttatgggccatttttctgactaccctaaagaaacatcatctatggtttaagtagcatatgagattaccaagcttgctgttggaccttggtgttctgagctgccggtttaactgtttagtgttcgatggtaatagcggattgagatgtgggcagatacgcctgtttcacagcttttctctggtaatttctagtccagtagtcctaagggacacattgaacaggaggcgcagtcaattagctgttatggaagataactcaaatttcattggaattggaaaaggctaggtctatctgccatgttacaccttcttattcagtgttaaattccttgcttcccctgtaaatgttggccacttggctttttttttccccaatgaagtaggcaataacccttcttttgtatatcttctgtaggcatttttactgaactgttgcaacagatgcaactgaagggtcttcaagtaagtaatcatgtaacccatttacttaagtccattctttgttatgctctaaagtttgctgaaaatatatgtttttgccttcaggtattgaacactttgtgtgtgatgttgtttcttgaaactctatttttagcttagctcacgaataataaaaactatgcttttcaaatacaaccttgttgccaaattttgttggtaaaacatatggcaaaacatgcatgcaatgtactggcatatgtttttggagatcttgttctacttttgcttatatctgtgacactagaattttttttatgaccttgaatggtaatatatgacattctatgttattcctccttaacaggttgatgaactctattcactcgatctggatgccctcaatgatcttcagtatgtaatcctaatacctgctagcagtatcataaatttcattcttttctaaaccaacttaacttggtgctttccaggccagtttatgggctcattgtgctgtacaaatggcaacctccagaaaaagatgagcgtcctatcaaggacccaatcccaaaccttttctttgctaagcaggtcagagctgtttatatgtttatttttgtgtagccttcactcctctgcatccttttatgatcaactcaatgcttcacttacagataattaacaatgcatgtgccacccaagctatcgtttctgttctattaaactctccgggtatcacccttagtgaggagctcaaaaagctaaaggagtttgcaaaggacttgccaccagatctcaaaggattggctatagtcaattctgagagcatccgtttggccagtaattcatttgcaaggccggaagtccccgaggagcagaaatcatctgtcaaggatgatgatgtctaccatttcattagctatgttcctgtggacggtgtcctgtatgagcttgatgggctaaaggaagggccaataagcctggggaaatgcccaggtggcgttggcgacataggttggctgaggatggtgcagcctgtcattcaggaacgcatcgatcggttctctcagaatgagataaggttcagcgtcatggctatcctaaagaaccggagggagaagttcactttagaactcaaggagcttcagaggaagagggagaacctcctggcacagatgggtgatccttccgccaataggcacgcgccatctgttgagcactctcttgcggaggttgctgctcatattgaggctgtaacagagaagatcataatggaggaagagaagtggaagaagtggaagacagagaacatcaggaggaagcacaactatgtgccattcttgttcaatttcctcaagattcttgaggagaggcagcagttgaagcccctgatagagaaggcgaaacagaagtctcacagctctgctaatcctaggtgaaatcaactgttatttgtctcgattgccgtggtttttgtcaatgtagagatggctgactagccttttgttttcgcggtagtgtttgaaccatgtgatgattattatctttagttatagatattcggtcgaatttagatgaaattcaggcgaatgtcccttg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0180100, RefSeq:Os02g0180100