Difference between revisions of "Os02g0236000"

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(Created page with "{{JaponicaGene| GeneName = Os02g0236000| Description = Similar to Aspartate aminotransferase (EC 2.6.1.1) (Fragment)| Version = NM_001052923.1 GI:115445216 GeneID:4328828| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0236000|
 
GeneName = Os02g0236000|

Revision as of 19:11, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0236000

Description

Similar to Aspartate aminotransferase (EC 2.6.1.1) (Fragment)

Version

NM_001052923.1 GI:115445216 GeneID:4328828

Length

4284 bp

Definition

Oryza sativa Japonica Group Os02g0236000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7735618..7739901

Sequence Coding Region

7735768..7735965,7736096..7736181,7736746..7736952,7737169..7737274,7737536..7737640
,7737723..7737895,7738335..7738494,7738583..7738678,7739334..7739428
,7739515..7739587

Expression

GEO Profiles:Os02g0236000

Genome Context

<gbrowseImage1> name=NC_008395:7735618..7739901 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:7735618..7739901 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatgtcgtcgtcccgctcggcggccgcgatccgggggcggcgggtcggggcgctggcgagggcgaggaggcacgcgacgagggcgatggcgtcgctgttcggccacgtcgagccggcttccaaggaccccatcctcggcgtcaccgaggccttcctcgccgacccctcccccgacaaagtcaacgtcggcgtcggcgcctaccgggacgacaacggcaagcccgtcgtgctcgagtgcgtgcgcgaggccgagcgccggatcgccggcaacctcaacatggagtaccttccaatgggaggaagtataaagatgattgaagagtcactaaagctggcatatggtgaggattctgatttcatcaaagataagaggattgctgcggtgcaggctctttcaggcacaggtgcatgccggctctttgccgatttccagaggcgtttcttgccaaattcacagatctacatacctacacctacatggtccaatcatcataacatttggagggatgctcaagtacctcaaaggacattcacctattaccatccagagtcaagagggcttgatttcgcaggactgatggatgatattaagaacgctccaaatggttcattctttttgcttcatgcttgtgcccataatcctactggagttgatcctacagaagaacaatggagagagatatcctaccaattcaagataaagaatcatttcccattctttgacatggcataccaaggatttgccagcggtgatccagagagagatgctaaggcaatccgaatcttccttgaagatgggcatcaaattggatgtgctcagtcatatgcaaagaacatgggactgtatgggcaaagggcagggtgcttgagtattctgtgtgaggatgagatgcaagcagtttctgttaagagccaattgcaacagattgcaaggccaatgtacagcaacccacctgttcatggtgcactggttgtctccataatccttaatgatccagaattaaagagtttatggttgaaagaggtcaagggtatggctgatcgaatcattggaatgcggaaggcactccgggaaaatctcgaaggcctaggttcaccattgtcatgggatcacatcaccaatcagattggaatgttctgctacagtgggatgacacctgaacaggtggatcgcttaaccaatgaataccatatttacatgacccgtaatggcagaataagcatggctggtgtaacaacaggaaatgtggcgtatttggctaatgctattcatgaggtcactaaaacgaaatga</cdnaseq>

Protein Sequence

<aaseq>MAMSSSRSAAAIRGRRVGALARARRHATRAMASLFGHVEPASKD PILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGNLNMEYLPMGG SIKMIEESLKLAYGEDSDFIKDKRIAAVQALSGTGACRLFADFQRRFLPNSQIYIPTP TWSNHHNIWRDAQVPQRTFTYYHPESRGLDFAGLMDDIKNAPNGSFFLLHACAHNPTG VDPTEEQWREISYQFKIKNHFPFFDMAYQGFASGDPERDAKAIRIFLEDGHQIGCAQS YAKNMGLYGQRAGCLSILCEDEMQAVSVKSQLQQIARPMYSNPPVHGALVVSIILNDP ELKSLWLKEVKGMADRIIGMRKALRENLEGLGSPLSWDHITNQIGMFCYSGMTPEQVD RLTNEYHIYMTRNGRISMAGVTTGNVAYLANAIHEVTKTK</aaseq>

Gene Sequence

<dnaseqindica>151..348#479..564#1129..1335#1552..1657#1919..2023#2106..2278#2718..2877#2966..3061#3717..3811#3898..3970#atcaaagcgagacaccttttcttttggcctccttcctcgcgaaaaccaccaaaccaaaacccacacacccacagcttttctccccctcactgctttgctctccagtctccacctcctcctcctcgctgccgcgccgcccatccgccagccatggcgatgtcgtcgtcccgctcggcggccgcgatccgggggcggcgggtcggggcgctggcgagggcgaggaggcacgcgacgagggcgatggcgtcgctgttcggccacgtcgagccggcttccaaggaccccatcctcggcgtcaccgaggccttcctcgccgacccctcccccgacaaagtcaacgtcggcgtcgtacgtctctctctctctctctctctctctctctctctctctctctctctctctctctctctctctcattgggatccccgatctcgcttgattctgacggagatgttgggcggggatgctgaaactgcagggcgcctaccgggacgacaacggcaagcccgtcgtgctcgagtgcgtgcgcgaggccgagcgccggatcgccggcaacctcaacatgtcagaacgagatccctccctgtctcttccagttagcttcaatgcttgattacttgtgcatgtgcggatctgagctatacctgctgtgttttgtagatatgagcttcaataatctttggttcttgattcatttttagttccattctgaaataaaagcatgctgataccgctggttcgttctgaagcgtgatctatcactagtattttgttttcaaacatgatctggatcatgtgtaaagcttccttttccttcttcaatcacgcaatgtatgtacgcttgatgcgaaaaaaaaaattattgttgtcccatcctgccgcggtttagacctcctgtaggcattctgtggtaaaatggtttccagatgcttctttatgctcttttgtggtgtggaagtaaacatcattgcagtacagattagacactccaatccttttttttttttgtcctgaaaaaaatgatcaactaaagcataatactgtcttgcagttgatgctacacctgttttagtgctggaccgttggaggttgccttaagttctaatttccactaattttgtaaaacagggagtaccttccaatgggaggaagtataaagatgattgaagagtcactaaagctggcatatggtgaggattctgatttcatcaaagataagaggattgctgcggtgcaggctctttcaggcacaggtgcatgccggctctttgccgatttccagaggcgtttcttgccaaattcacagatctacatacctacacctacatggtccaagtgagttggaatcctgctgagacatgaattgttgttgttttctttacatctaagaaaaatctcttaaagaaagaaataggaagagaaaacatagatgtagatggtgtgtattactgtctctacatgatatggtaggcacctgtgattcttgctctccaatattgttaacatcatcagtatctaacattctaacctcagtgtgtgtaacttctccagtcatcataacatttggagggatgctcaagtacctcaaaggacattcacctattaccatccagagtcaagagggcttgatttcgcaggactgatggatgatattaaggtgattcgtttctccagtattgttagaaagatatcttacttttaggaattattacattgttgctggtatctgtagcaagatcatggatattgtttgaaattagatatttgtagagtcaatactgatttagctttctttctcattgataaatgataagttttaggtacacttagtttttctcactttcttataggtgcttctgacctgttgatgggtttcctatagctccttttaatttatttttgttcctctcatctgcagaacgctccaaatggttcattctttttgcttcatgcttgtgcccataatcctactggagttgatcctacagaagaacaatggagagagatatcctaccaattcaaggtagcagaagtgaaaaggactggctttttgttggtgttatcaccaacgacagatatcacattttccttatgtgttttgacagataaagaatcatttcccattctttgacatggcataccaaggatttgccagcggtgatccagagagagatgctaaggcaatccgaatcttccttgaagatgggcatcaaattggatgtgctcagtcatatgcaaagaacatgggactgtatgggcaaagggcagggtgcttgaggtattcactcgcctagtgtcatttatgcttgaaagttatatagttgtgcaatgcagtgctcctatgctctggatataattaagaggcacaaaatttacatcatgttaactactgttgattcaggatttgtactgttttcttcagggagagcatagcaaagctactctctgtattgcatgactaattccatgcatggtccttgaaaatgaaacgtgtcttagagcattagttatttgatttctcaaaaaaaaaaggaatttgcaagtggaactcatatctagcgagactgaaatattttcccttcaggaagccctcctgttccattaaggggaagagtatataacatcaaatagaattgagtgatccaatttgttatcttttctttaaacaatgatcatactctaatgatcataaaactgattttgtattgctgtttcagtattctgtgtgaggatgagatgcaagcagtttctgttaagagccaattgcaacagattgcaaggccaatgtacagcaacccacctgttcatggtgcactggttgtctccataatccttaatgatccagaattaaagagtttatggttgaaagaggtcaaggtaagaagtcttaactacgtaagttcctaatagattaatctatgtgaagcatggaaaggagtttaatatcgccactgggttgtctcagggtatggctgatcgaatcattggaatgcggaaggcactccgggaaaatctcgaaggcctaggttcaccattgtcatgggatcacatcaccaatcaggtaaagaaatcatgaaaatgtaccatttctgaatatgaattcagtgacatgcaaattataccagttcaaagtagttgccagcatctccaaggcccacaatagatatagtcaggttgtaccataaacttgttggagtttggttcattgaggtattagttcatgtggactgatgtactctagtgctggtcctgttgcttgaacttccagcataattgcaaactagtcaaagtggattttgtatcataaatattgtgttctaactcgaggccttgtcaaagtggttgtcttgagtcccaactaatcaattagaaatggataattgtacaatagctattaagtcttgtctgggtatagttgattcggtaagtaacagtgtcagtcaaaaactagtaagaaccactagcttcactcgttctccttgtaagcttacaagtacagacatatccattttgtacgattgatatatgttgggcaagaattatgtgcaacttaaatgtccatttacccatacttggttcaaattttcaccatgtatgcaacttgatatcattgtgtgttatgttcactcagtctctatggagattgatattccacattcagcctaatattattgttagttatatggtgaatattaaaaacgtaagcgtatttgcagattggaatgttctgctacagtgggatgacacctgaacaggtggatcgcttaaccaatgaataccatatttacatgacccgtaatggcagaataaggtacaataacagtacttttagtttttcatgttgctgaatctttgttttaatcgaataaaaatctaactttctgtcatttctttcagcatggctggtgtaacaacaggaaatgtggcgtatttggctaatgctattcatgaggtcactaaaacgaaatgaagctacttcctcttccctcttcggccaatgaaatgaggcttgcaagcggcggcgttttttttttggggggtggtctattgacctttaagatggttgtactagagaaataatccagtgaacatgctggtgtttctccaacttcggattttccctgtatggaggagagaactagaaacctacccaattttgagagctatagatgccgatcctgttatttcaatcgtcagatgttatgcctgtggcagcctggcaggtcacctcagaaacagagatatgtgaaagagaataaatgcaaatgagctgagcattttgac</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0236000, RefSeq:Os02g0236000