Difference between revisions of "Os02g0237100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0237100| Description = Similar to Spermine synthase| Version = NM_001052930.1 GI:115445230 GeneID:4328835| Length = 3763 bp| Definition = ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0237100|
 
GeneName = Os02g0237100|

Revision as of 19:12, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0237100

Description

Similar to Spermine synthase

Version

NM_001052930.1 GI:115445230 GeneID:4328835

Length

3763 bp

Definition

Oryza sativa Japonica Group Os02g0237100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7801398..7805160

Sequence Coding Region

7801735..7801813,7801983..7802119,7802264..7802322,7802435..7802510,7802617..7802773
,7803141..7803229,7803548..7803650,7803819..7803913,7804201..7804267
,7804794..7804966

Expression

GEO Profiles:Os02g0237100

Genome Context

<gbrowseImage1> name=NC_008395:7801398..7805160 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:7801398..7805160 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggttggggccgtgcaggaagggatagtgcgtgagatgaacggaggattcgaggttatgagcgggtatgacaggtcgtccatggcgccgaagcagcagcagagggaggaggagagcaagtggtacgaggaggagatcgacgacgacctcaagctctgctacgctctcaacagtgtgttgcaccggggagcaagcaagtaccaggagatcgctctcattgatacaaagcattttggcaaggctctaataatcgatgggaagatgcagagtacagaggtggacgagttcatctaccatgagtccctcatacaccctcccctcctcttccatcccaacccaaagacggtgttcatcatgggaggcggcgagggttccgcggcgagggaggtgctccggcacaacaccgtccacagggtcgtcatgtgcgacatcgaccaggaggtggtggacttctgccggacgtacctgaccgtcaactgggacgccttcgccagcgacaagctctgcctcatcatcaacgacgccagggcggagctggagaagagtagggagaagttcgacgtgatagtgggagacttggctgacccagtggaggggggcccctgctaccagctctacaccaagtcattctaccaacacatcgtcaagcccaagctcaacgaccgcggcgtcttcgtcacccaggcagggccagccggcgttctgacccacaaggaggtcttctcctccatctacaacaccctcaggcatgtcttcaagtatgtcaaagcatacactgctcatgtgccatcctttgctgacacctggggctgggtcatggcatcagattatccatttagcatgaatgctcagcaaatcaatgagaggatcaaggagaggatagatggggagctggtgtacttgagtggggagtccctcatttcctctaccatattgaacaagagcgtttaccagtcgctgttgaatgagacgcatgtgtacaccgaggatgatgcaaggttcatctacggacatggaagggcacgttgtgcttga</cdnaseq>

Protein Sequence

<aaseq>MVGAVQEGIVREMNGGFEVMSGYDRSSMAPKQQQREEESKWYEE EIDDDLKLCYALNSVLHRGASKYQEIALIDTKHFGKALIIDGKMQSTEVDEFIYHESL IHPPLLFHPNPKTVFIMGGGEGSAAREVLRHNTVHRVVMCDIDQEVVDFCRTYLTVNW DAFASDKLCLIINDARAELEKSREKFDVIVGDLADPVEGGPCYQLYTKSFYQHIVKPK LNDRGVFVTQAGPAGVLTHKEVFSSIYNTLRHVFKYVKAYTAHVPSFADTWGWVMASD YPFSMNAQQINERIKERIDGELVYLSGESLISSTILNKSVYQSLLNETHVYTEDDARF IYGHGRARCA</aaseq>

Gene Sequence

<dnaseqindica>3348..3426#3042..3178#2839..2897#2651..2726#2388..2544#1932..2020#1511..1613#1248..1342#894..960#195..367#actgccacacatatcgctatctctgctagataccaagtgcaactgtgcaagtgcaagtccaagttcagagagagagagatcgagctagcctgactaaacttgaaaatattgcatttgcgtctttgatcttagctatagcttgctgctgctgctgctgatagtttagcttgagagagctagcggcaagagcaaagatggttggggccgtgcaggaagggatagtgcgtgagatgaacggaggattcgaggttatgagcgggtatgacaggtcgtccatggcgccgaagcagcagcagagggaggaggagagcaagtggtacgaggaggagatcgacgacgacctcaagctctgctacgctctcaacaggtaaattaatttatactactccctccgtttcagattataaatcgttttgatttttatcaaagtcaaactgcttcaactttaattaaatttgtagaaaaaagtagtaacatttttaactcaagacaaatatattatgaaaatatatttaattattgatttaatgaaactaatttggcattgtaaatattactatatttatctacaaacctagttaaacttgaagtagcttgattttaaccaaagttgaaatgacttataatctaaaacgatggagtacctgtatattaattattactatcatgcgtgcatcacaaagagtttgtgttatcgttgactgtcaaaataaagcaaaaatttcagatagaggtcccaggacaatgcctacaaatgtagaaacttataatttcagtaatcggagtactaaattgagtaattaacaagatatataggtgtctctttcaatctatgcattttgttgccatgtgagagatgatgtgctttgcctaattttctggtgatgtgaaagtgtgttgcaccggggagcaagcaagtaccaggagatcgctctcattgatacaaagcattttggcaaggtatctgtccatttctgcctctcttttttctttcttttttttaaaaaaaaagaaacacagaagtcctatatatcatttctattcttgtttcgtaacaccaacttgtgtggtgtaatttagtactcccttcgttttaaaatatattaacctaatactagttagaaaaatatattttagtactagtttgctatttttaaaaatgaagagagtaagtaactagaacactgatatgacaccctttttctaccaggctctaataatcgatgggaacaccctttttctaccaggctctaataatcgatgggaagatgcagagtacagaggtggacgagttcatctaccatgagtccctcatacaccctcccctcctcttccatcccaagtacgttaaattaccatcgcgcaatcaatgatctcacagctgcttccttcatctcgaaatatattaacgactacctcctattctagtcaaacactaatccagattctttagacatgtaagtatatataataaaatagattctaatctctcgaaggtgagtacgtgcagcccaaagacggtgttcatcatgggaggcggcgagggttccgcggcgagggaggtgctccggcacaacaccgtccacagggtcgtcatgtgcgacatcgaccaggtactcgatgatcgatctagattgcaccgttgattgatatatatgcagtactacctccgtttcagattataagattttatatgtctagattcattaacatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgaatgtgaacaatactagaaagtcttataatataaaaacggaggaagtaatagattcttaaattaaactgttgttttgtttctctgaatgaacgcatatgcgtgggtgcgtgatgataattatattaagcaggaggtggtggacttctgccggacgtacctgaccgtcaactgggacgccttcgccagcgacaagctctgcctcatcatcaacgacgccaggtatgtaccaaatcatatatagaaggtggtcaggtggacatactagtgttctctattaaagatgacgataaaattagagtatgaaacaaactattaacatgtgattaattgagttttaaatattataaagttgaaaaatagatttatctgatattttaaaataatttctacgtataaagttttcgtacaaaatataccacttaacaatttaaaagcgtgttaatgaaaatcgagataaaatctgtatcttaatctggaaaaaagaacgaccatattaatgctgcaaactgaaaatgaatcagcatcatgtattcatgtgtatgtatgttttcttgatcggtgtgtgcttatatgcatttgcatgcagggcggagctggagaagagtagggagaagttcgacgtgatagtgggagacttggctgacccagtggaggggggcccctgctaccagctctacaccaagtcattctaccaacacatcgtcaagcccaagctcaacgaccgcggcgtcttcgtcacccaggtacgtatataatttttcatcaactctttgcctagttatttgactgaactctgaacttctctgaaattttagcgtttttactgacagttgttttggctgttgacaggcagggccagccggcgttctgacccacaaggaggtcttctcctccatctacaacaccctcaggcatgtcttcaagtgtgagtagcccagcaattaaagactcccttaattatattttttgctatatgcatggggtgattttgtttttgtgattctgatgatgcatttgttaatcatatcataccacagatgtcaaagcatacactgctcatgtgccatcctttgctgacacctggggctgggtcatggtatgtagctagccaccttattacaatattacttactgaaaagttcagttccctttctattctttttagatggttttcctttctgctagcatcaattaattaatccgttgctattcttcttcctattattccttttgtatgtaggcatcagattatccatttagcatgaatgctcagcaaatcaatgagaggatcaaggagaggatagatggggagctggtgtacttgagtggggagtccctcatttcctctaccatattgaacaagagcgtttaccagtcgtaagtaactatcagtaaagatcactgtaaaaaaaaactactatacttattttcagcaacacgtgaaagatgcaggtggcatcgatgcttaagtgaaaagatattcagaacattgcactgactgaactgtaatttcttttctttttccttgaaaaaataatactcgcaggctgttgaatgagacgcatgtgtacaccgaggatgatgcaaggttcatctacggacatggaagggcacgttgtgcttgaatcccatatcttacacgcataaacacctgagcaaaatggtgataaattagtagctattttccaacttaagaggtcgagatgcacaagtgtggatagcaagtctgaaattgatcagttagctactagatctccagatcaaccgatcgagaacagaaaaaagaacaagtgatcgatgcaactttgtgaagaacttttttcgcctttgttttcctacgtgaggcgaggaaagaactgaaaaagaactagaatggaataaaaactatataatgctctccatgcatgtgcatgtttcactctttttgttcagcgtaaatgaatggtagctctcttgacaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0237100, RefSeq:Os02g0237100