Difference between revisions of "Os02g0474700"

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(Created page with "{{JaponicaGene| GeneName = Os02g0474700| Description = Armadillo-like helical domain containing protein| Version = NM_001053375.1 GI:115446120 GeneID:4329353| Length = 763...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0474700|
 
GeneName = Os02g0474700|

Revision as of 19:14, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0474700

Description

Armadillo-like helical domain containing protein

Version

NM_001053375.1 GI:115446120 GeneID:4329353

Length

7630 bp

Definition

Oryza sativa Japonica Group Os02g0474700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:16987209..16994838

Sequence Coding Region

16987209..16987278,16987447..16987570,16987686..16987866,16988986..16989143,16989231..16989274
,16989354..16989472,16989552..16989750,16990520..16990651,16991513..16991616
,16991719..16991898,16993078..16993217,16993303..16993442,16993578..16993738
,16993975..16994098,16994182..16994333

Expression

GEO Profiles:Os02g0474700

Genome Context

<gbrowseImage1> name=NC_008395:16987209..16994838 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:16987209..16994838 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtgtttcaatgacaatgatcaaaagttatgggatgaagatcctcatgaatatgttcggaagggatatgatatcattgaagatttgtacagtcctcgaacagctgctatggattttgtgagtgaattggtaagaaaacgaggaaaaagcaatctccaaaagtttatccatttcattgtggatatttttaggagatatgatgaggcatctattgaaatcaagccatatcgccaaaaagatggagcacttcttgctattgggacattatgtgataagctgaagcaaacagatccatataaagctgagttggagcgtatgctggtccagcatgtcttccctgagtttaatagtcatgttggacacctgcgtgccaaggctgcatgggttgctggacagtatgcacatatcagtttttcagaccaggacaattttcggaaagctatgcattgtatagtttctggaatgcgtgatccagatctccctgttcgggttgattcagtgtttgcacttcgttcttttgttgaagcatgcaaagatctcaacgagatacgacctatactccctcaactccttgatgaattttttaaactgatgaatgaagttgagaatgaggatcttgttttcactcttgaaaccatcgttgataaatttggtgaagagatggcaccatatgcactggggttgtgccagaatttggctgctgccttctggagatgcatggctagtcaagaagctgatgatgaagctgatgattctggtgctttggcagctgttggttgtttacgagccataagcacaatccttgagtctgttagcagtctcccacacctttttattcaaattgagccaactctgttgccaataatgcgcaggatgttgacttctgatggtcaagatgtttatgaggaagttctagaaattgtctcatatatgacttttttctcaccatcaatttcgttggacatgtggagcctgtggccgttgatgatggaggctctaaatgattgggcaatagacttctttgagaatattcttgttccattggacaactatgtttcccggggatcggaccattttcttgcctgcaaaaacccagattatcagcaaagcttgtggagtgcactatcatctattatgatggatcaaaacatggaagattcagatattgagcctgctcccaagctcattgaggtggtttttcaaaactgcaaaggcaatgtggatcaatgggttgagccttacctcagtcttacaattgatcgattgcgtcgagcacacaaaccatatttgaaatgtctccttgttcaagtgattgctaatgcgttctactacaacccttctttgacacttgcaaccctacataaacttggggctgtgactgaaatttttaacatttggtttggtatgttagaacaagtcaaaaagagtggtgtacgagccaattttaagagagagcatgataagaaagtttgttgcttggggttgacctcacttattagccttccagcagatcatattccaggagaagccctgaatcgtattttcaaagcaacacttgatctgcttgttgcctacaaagagcaagtggcagaatctaagaaacaagatgatgctgatggtgatgatatggatggttttgatgctgatgaagatgaagatgatgatgaggttgaatctgataaggagatgggacttgatgaagaagatgctgatgaagtaaacagtcttcatcttcagaaattagctgctgaggccagaggcttccagccagctgatgagtatgatgactctgatgacgatttcagtgatgatgaggagctgcaatcaccaatagatgaggttgacccgttcattttgtttgttgaaactgtccaaggcttgcaagcatctgatcctatcaggttccagagcctcatgcaaactcttgattttcgttatcaggcccttgctagtggcatagctcaacatgctgaggaaagaagagttgagattgagaaagagaagttggagaaagcaaatgcacaatga</cdnaseq>

Protein Sequence

<aaseq>MCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTAAMDFVSELV RKRGKSNLQKFIHFIVDIFRRYDEASIEIKPYRQKDGALLAIGTLCDKLKQTDPYKAE LERMLVQHVFPEFNSHVGHLRAKAAWVAGQYAHISFSDQDNFRKAMHCIVSGMRDPDL PVRVDSVFALRSFVEACKDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFG EEMAPYALGLCQNLAAAFWRCMASQEADDEADDSGALAAVGCLRAISTILESVSSLPH LFIQIEPTLLPIMRRMLTSDGQDVYEEVLEIVSYMTFFSPSISLDMWSLWPLMMEALN DWAIDFFENILVPLDNYVSRGSDHFLACKNPDYQQSLWSALSSIMMDQNMEDSDIEPA PKLIEVVFQNCKGNVDQWVEPYLSLTIDRLRRAHKPYLKCLLVQVIANAFYYNPSLTL ATLHKLGAVTEIFNIWFGMLEQVKKSGVRANFKREHDKKVCCLGLTSLISLPADHIPG EALNRIFKATLDLLVAYKEQVAESKKQDDADGDDMDGFDADEDEDDDEVESDKEMGLD EEDADEVNSLHLQKLAAEARGFQPADEYDDSDDDFSDDEELQSPIDEVDPFILFVETV QGLQASDPIRFQSLMQTLDFRYQALASGIAQHAEERRVEIEKEKLEKANAQ</aaseq>

Gene Sequence

<dnaseqindica>1..70#239..362#478..658#1778..1935#2023..2066#2146..2264#2344..2542#3312..3443#4305..4408#4511..4690#5870..6009#6095..6234#6370..6530#6767..6890#6974..7125#atgtgtttcaatgacaatgatcaaaagttatgggatgaagatcctcatgaatatgttcggaagggatatggtgaatttcaggaccctgtcttgctgtcaattagagtaggctatcactcagagtgacttagggatcctttgaaactctagtatcccaagcaaggcctagtatcacacgtttcctgtgtctcagttcattactgtaggttttttgctcatgcattgacttcttttgtagatatcattgaagatttgtacagtcctcgaacagctgctatggattttgtgagtgaattggtaagaaaacgaggaaaaagcaatctccaaaagtttatccatttcattgtggatatttttaggaggtaagatttacttgccacttgttgtcttcaataattacacactttctactcagtgaagtgcttcaacatatctgaaggcacatgggggtgacttcgattaatgaatgttttacagatatgatgaggcatctattgaaatcaagccatatcgccaaaaagatggagcacttcttgctattgggacattatgtgataagctgaagcaaacagatccatataaagctgagttggagcgtatgctggtccagcatgtcttccctgagtttaatagtcatgttggacacctgcgtgccaaggtagagtcaattgaaagttataattttacttgcttcttagctgcttttgacacattcgtgtatcatgtgcaaatcatattacagacttctgtttctgttttgcttattgtggaaaaaagtataaaccacttattttacaatgatggtggtctagttaattacacccaattcacatctaatcaatatatatgccactgaagatctcaagcattacatgcactgggtagtgaataacataggatgttcagtacgtggctctgatgccgcaatgacatgtgagcaatgctcctaggcttggtgtgagcctcacaatttgaggcatatattaagaattgtggctattcggtggcatagttcagagttggaaaataccattgcaaatatctcaaagttgggaaatgtaattgcatgtgtcattgtatctgttatttaaagctgagaagatttgtgcttccattgaactatcaaatactactagtggtgacaaatacatgctgttttggatattgacagtctaaaaattgcaactttgagggctctgctgtaatatatttgaaacctgataaattatattctcctgaaagtaccttttgagaatccacgcacatgacttacatgtatcctgtctaaaaagggagggagtggtggtggtgaatggtgaatctgccaccaccgcaccaccaactcccaaaactgacacgtgggaccactgtccatcccttctccaaaccaaatgcatggtagaacagtgaaagtcacagatagaccctggagctctcaaccatgatcatacttgaaagttaataataaatggagtgaaaacttggcaagcaaaaacctcgaattaattctaaaattaagctctaaaattcaagataaatttcctctctgcattgtgccgatgtgattttgaaatcggtaacaacatacaggccattttgctagtttattgatactcaataattcaaaattttagctggacatgtctaaaacgacatgcatatctaacacagcattagacaattattctctatcaggtcttctgtttgtgctatacgatgctaacttgtgatcaattttgttctttatggcatcaatctgacctattctatctaataggctgcatgggttgctggacagtatgcacatatcagtttttcagaccaggacaattttcggaaagctatgcattgtatagtttctggaatgcgtgatccagatctccctgttcgggttgattcagtgtttgcacttcgttcttttgttgaagcatgcaaaggcaagttttgctttgtgcatgccttaaattttcatactaaattttggactgctaaaaaaatatttgactatacctctgcctgtgcagatctcaacgagatacgacctatactccctcaactccttgatggtatgataattaaatttacttctgttaaccttgtacttttgacagtagattaatttgtggctgatcatgtattgtccagaattttttaaactgatgaatgaagttgagaatgaggatcttgttttcactcttgaaaccatcgttgataaatttggtgaagagatggcaccatatgcactggggttgtgccagaatttggtgcgttcttctctctgtacatttaaacccttctgttttgtgttgctttagtaacacattttttgtatccctttggtaggctgctgccttctggagatgcatggctagtcaagaagctgatgatgaagctgatgattctggtgctttggcagctgttggttgtttacgagccataagcacaatccttgagtctgttagcagtctcccacacctttttattcaaattgagccaactctgttgccaataatgcgcaggatgttgacttctgatggtcaaggtattgagctgtttgtggatagtatttcatatacatatactggtagtgttgtagcgtttagtgtatcctttccaatcaccatgatgttgcaaactattggtgtcatatgctgctcataaagaagcaacattcctaactttcttcagtcagaagagttcatgcatggcatgttcatgtgtatcaacagcacccacgtggttactattgactctgggtattttctagataagattaggttgaactgttagctattttcttaatgcaagggtggtgctttatctggtttcattgaacatagtctttagtccccccctcccccccttctctgtccttgtgcagctccatccgtggctctgttgtgccacttgggcccagggaaattccacaggtctaaggggattgtcccaaccatgcagattctttaactgttggaatggcaatagtatgtgttgtattacaaagttatgttcgacatgtcttctctggtgatgtattaattgatgatttacaacattaattctgctgattgtgagaacagcacaaacaattttattggacagggatgtttccaattaaatatttgtccatttcaaaactagaaaagttataataagcacgtaagtaatgttaattgtttatgatctaatataatgtggcagcagaattacaaggtattggattcttatgctaagtttgtttagtactaactacttatgatttattttgttgttttttgttcatacacttatgcttctaaaatatactgcagatgtttatgaggaagttctagaaattgtctcatatatgacttttttctcaccatcaatttcgttggacatgtggagcctgtggccgttgatgatggaggctctaaatgattgggcaatagacttctttgagagtatgacattttaatttctttatccatttttcagatacatgtattttctgcctttcatctttgtcgtcttattctctttgtttttcacctaaatggtgatatttttaaaatagcctttacagattcctcatgcttatcacatggaatacatgcattcatcaatatttgcttaagtcctattgttgttctgttccttttagatttaaataatgttttttctactccctctgtttcattctttatcatgatgtttttagtgccattctccaaaattgttgtgcatgactccaggtttcaatggtccccaaattttggtgccatttagatgttgaataatgtcttcacgtttagatgctgaatctgtctattcataatcttagtgtattggctaaaaagatgctacttgacataaaaaaatgtattcgcaataggccaatgctgtttcattgaaatctaggcatgtgccaacgcttatcatgttcaagtctcagaaatacaaagattttgcagtatctggtcaactaatctaaatatattgacatatgaatacaaaggttttgcagtagcttgctccagaataggttttgcttttttcatctcctgggaatattcctgctgcactaatataatctagtagtttgtgtgccttgtgcagctgataatttgctctacttgggctgtcgtcttgaatgaatttctccatttatctgagtggaagatgtccatctatcttccatttttgcaaattgtttgaggccctgttattagcaaatgctaccttgagaaaagtgcattttgcatttaaatttaatagacttttgcagctttgtcttagctttttttttgttgtcttccccacagatattcttgttccattggacaactatgtttcccggggatcggaccattttcttgcctgcaaaaacccagattatcagcaaagcttgtggagtgcactatcatctgtgagtgtgttttgggttaattgccatattttttttgttagatttcacaatataacagtgtactagcaatctagcatatgttgataattttcaaatttgtagattatgatggatcaaaacatggaagattcagatattgagcctgctcccaagctcattgaggtggtttttcaaaactgcaaaggcaatgtggatcaatgggttgagccttacctcagtcttacaattgatcgattgcgtcgagcacacaaaccatatttgaaatgtctccttgttcaagtggtaagatccctttgttttcaaatcttgctaatcaaatgatgttttgttagtgttgcctgagatcactttcttagaatcattgtttcaagcttatacgatgaactggtacgtgcggttgccctggtaactagtaaatggcggtatcttttttgtgaacttgttgaactgtactttttttaatgtattccacaatacaaaatgggaagcactgagacatgcttggcttggttttcgcccattctttctgttacatgtagaacaagtggataccaataagtacatattttaaatataggaaaatgggaatgaatttaatctatatgaagttggttggagctttcctttgggatgtgcaggagcaggaagcatatgcgattttaaaaatgtaggaaaagtgagaattaaattgaaatcagggaaatcaatgagtatatgcatttgaaccttttttttgtcatcatatctagtcattttcaggcattcagtatccatctggtttggaggctctactgtcatctttccacatgcaaaagtggctagcgccatggactacacaatgtggcatcaatctagagttgagattagtgatggtagtgttgtgctatgtggtggcgactgatatggggatgagcttgagctcagggaggcagatgggttgatctttggttctacaatgagaatatatacataaatgggacttttaaacacttgataacctgatctacaaggaaattaacctaatacctgaattacatattttctctttctctggttgctattagttactgtaatgccggtcttggatgagctggtcagcataattgacatgaacaatggttgggagcagagaacacaaaacactgcttgtatacagatagcacataatgatggtcttatgtagcagaccccttctttctgaaaataatttttgtataaacgagctgtccaatatattgctgatcagcaacagccttatggttaatatttcatgttacagttatttatatccttccatcgtatggaaaaatcatctcttgggtttatttgtctttggcaagagacattgatagcctactatttttgtttggttttatatatggttcaactaccattttataaactatatgtgctatctatgctctacgcatgttactaagcgcctttatatgctgcttgtagattgctaatgcgttctactacaacccttctttgacacttgcaaccctacataaacttggggctgtgactgaaatttttaacatttggtttggtatgttagaacaagtcaaaaagagtggtgtacgagccaattttaagaggtactttttagtagttttgtcagtacttatatctacctcatgttttctacagtgaactgaaatcgttttactattttgtttacagagagcatgataagaaagtttgttgcttggggttgacctcacttattagccttccagcagatcatattccaggagaagccctgaatcgtattttcaaagcaacacttgatctgcttgttgcctacaaagagcaagtggcaggtggaatatgaatatttttacgattcttctagtaaattggagtttacttttctgcatgatatatttgtttaagtttatgaagctgagtaagattttcttgatatatttatctatgcttttctctttgatgaacagaatctaagaaacaagatgatgctgatggtgatgatatggatggttttgatgctgatgaagatgaagatgatgatgaggttgaatctgataaggagatgggacttgatgaagaagatgctgatgaagtaaacagtcttcatcttcagaaattagctgctgaggttagtgttgcattctgagtactaaaattgcattattggcctcaatatttttccttccttttttgtactagtaagaataactgtctacacaaggtactggtcggtttgcatgaatatttcttccgtgttcaaattcatgctaatgtaacaaatgcagtggcatgtactagtaaaatttgtattgatattcatcttctgtttttatttaaaaaataataatcatttttatggtacaggccagaggcttccagccagctgatgagtatgatgactctgatgacgatttcagtgatgatgaggagctgcaatcaccaatagatgaggttgacccgttcattttgtttgttgaaactgtccaaggtaaagtgaatccttgttattagaagtttggagcatacatgatatatgtgaagtttctcacgagtgcccactgtttttgacaggcttgcaagcatctgatcctatcaggttccagagcctcatgcaaactcttgattttcgttatcaggcccttgctagtggcatagctcaacatgctgaggaaagaagagttgagattgagaaagagaagttggagaaagcaaatgcacaatgattagtcataaagttctttgatattattgccatttcaccgggttgtggaagtggtgggccatcttgtgatttggcgcgaccacaggcaatcaattttggagccttagtctgccatttaggcaggaaaattttaggctcgcaaaattttatacttgcgagagttgaaaccggtgatagagccttcttggatagtctcttcaccggaagtcattttcctagtggcccatcggtcggtggcttggattgtgcaagcgtgacactgggaagtttctccaatttgagggcactagcttgtcatgctgtttgggccactaatatattttttttgctgggggcttagcatttgttggagagccccccactggtggcggggtgcatctccgtatcacagtttgtagggcagtttacatttagactgtagaatgtatatggttttgttcttgtctagatcttaccgtgagtttccattggtgggctgggatatacggttacgttttgtttttggc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0474700, RefSeq:Os02g0474700