Difference between revisions of "Os02g0537400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0537400| Description = Chaperonin clpA/B family protein| Version = NM_001053583.1 GI:115446536 GeneID:4329576| Length = 3285 bp| Definitio...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0537400|
 
GeneName = Os02g0537400|

Revision as of 19:16, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0537400

Description

Chaperonin clpA/B family protein

Version

NM_001053583.1 GI:115446536 GeneID:4329576

Length

3285 bp

Definition

Oryza sativa Japonica Group Os02g0537400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:20719086..20722370

Sequence Coding Region

20720573..20720647,20720733..20721073,20721166..20721445,20721538..20721735,20721848..20722120

Expression

GEO Profiles:Os02g0537400

Genome Context

<gbrowseImage1> name=NC_008395:20719086..20722370 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:20719086..20722370 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaaaataacaatggaaatacgtcagtgaatggagtgaacgaagcaattgttggcccagatcatgttgctcaagttgtgagccgatggactggcatcccggtcactacacttgatcaagaggagaaggagaagttaatccacctggcagacagattgcacgagcgagttgttggccaggatgaagctgtcaaactggttgcacaggcagttttacgttctagggcaggccttgaacaacctggccaacctataggctctttcctctttctgggctcaaccggtgttggaaagacggagcttgcaaaagcccttgctgagcagctatttgacagcgagaagatgttgatccgctttgacatgtctgaatttgttgggagtggatctgtgttgcgtctcattggagcacctccaagctatcatggccatcaagatggcggacaattgacagaaaaagttaggacgcgtccttacagtgtcatcctttttgatgaggtggagaaggcagatccctcggtgttcaacgtgttccttcagctcctcgatgatggcatgttgactgatggcaaaggaaggacagtagatttcaagaacaccatcatcattatgacctcaaatctgggagctgagcacctaactgaaggagtgactggtgaaagaacaatggaagctgcacgggaccttgttatgaaacaagttcagaagtatttcaggcctgaacttctcaacaggctgagtgagattgtgatatttgagccgctttcgcacgacaatcttaaggaggtcgtcaaaattcagatgaagagtgtcgttaccagtgtggctcacaagggcgtatctctacttgcaagtgatgatgccttggacgtcatcttgtctgaatcatacaacccaatgtatggggcaagaccagtaaggaggtgggtgcagaagaatgtgatgacaaagctctctgagatgcttattacaggagatgctggacaggggtcaactatttccattgacgctactgatgacaagaaggggctgaactttcaagtattgaaggaggaggtagtggttccgcgaggcaagaggccagtcgaggagcttcaaagcgactcggatagcgatgacgatgtgttcgagatcgcccccataccaaagaggaagaaaggtgattattag</cdnaseq>

Protein Sequence

<aaseq>MQNNNGNTSVNGVNEAIVGPDHVAQVVSRWTGIPVTTLDQEEKE KLIHLADRLHERVVGQDEAVKLVAQAVLRSRAGLEQPGQPIGSFLFLGSTGVGKTELA KALAEQLFDSEKMLIRFDMSEFVGSGSVLRLIGAPPSYHGHQDGGQLTEKVRTRPYSV ILFDEVEKADPSVFNVFLQLLDDGMLTDGKGRTVDFKNTIIIMTSNLGAEHLTEGVTG ERTMEAARDLVMKQVQKYFRPELLNRLSEIVIFEPLSHDNLKEVVKIQMKSVVTSVAH KGVSLLASDDALDVILSESYNPMYGARPVRRWVQKNVMTKLSEMLITGDAGQGSTISI DATDDKKGLNFQVLKEEVVVPRGKRPVEELQSDSDSDDDVFEIAPIPKRKKGDY</aaseq>

Gene Sequence

<dnaseqindica>1488..1562#1648..1988#2081..2360#2453..2650#2763..3035#ttcaggatgctgccattgtcgctgctgcacagcttgcggaccgctacattaccggtgagaaaatttttcattttgtttaagggaccgaaaaacagtcagatttttcattatactgtaagttacacatatttacacttaacactgtaaatgtctcttgcaatgtaatgtttgcatagtgtgcaaattgcttaactatacttggaagaggagataggagaaaacatgcttatatatacaagagagcgaggtagcaatcaagtaaaaaaaatgtgagaccatatttttagcaaaaccgtttaattagtttattccttgtgctttcatgatactaccggttaagggggattgcacatattctagggttgttgtacatgtcttttgggattacgagttttgttccgggattacattccctgttgtttaagttttgtagggattttaatatcaaattcccattgtcagtatacaattttgttagaagctagtggtatagaacttcacctttttatgaattcggtagcatggacaacactaggaatctcacagtcgggatgccagtatttggccagatgaaaatttggagttgggtcaaattttaacatctgggagaggacttaggtgactcttcatgttagacattcttaaatttgtacaatccatttttttaattggagctaagaattcttatttttaattcatgtatgtgagatgaatcaggccatgaactttcagaaaaaaagaagtcatctcgttgaccctgatttttttttttctaaaacatcatagattactctatactattattagctcacatatcatggcgctgttagtgaaaatgcatttagtcattttatgccttgtactgttgagttctaagttcattacatgtatatttggcttctgagattatccaccaaagagcaactggtaatttgtgggtctatatcactcaatcgttaaagacccttttaattaaaattttccattaccaatccaacatgagggttgattattagtggctgcagtcacctacatttaggaattgcaataaaaagaaagagaagaaaatcgaataaaacgttaattggatatcatggttgtgttctgttccttaactgtatgtaccttcacttgttgacttgatcaactcaactacttttgtaaaggcgactgcaattgacagcataatcattcattccctgctgttctgtgtggtttcttacataagtttacgtaagatctcctgatataatggatcacatgaatttaaagattgatagaattcccgagaatgcttcatgggcaaatatggcacagtgtttctagcgattttcatgcgcatgacagctgagtattaggtaatttgacagatggtatttcttcctgtaggtcgtcaatttcctgacaaggcgattgatctgattgatgaggcttgctccaccgtaaggctgaagattgatagtcaaaaaggggtgaacaccacaggaatgcaaaataacaatggaaatacgtcagtgaatggagtgaacgaagcaattgttggcccagatcatgttgctcaagtaagcatgctacttgtatttgtataataattctgtttcgatcattcattctaatatcctaattatgttcaaatgttatatgaaggttgtgagccgatggactggcatcccggtcactacacttgatcaagaggagaaggagaagttaatccacctggcagacagattgcacgagcgagttgttggccaggatgaagctgtcaaactggttgcacaggcagttttacgttctagggcaggccttgaacaacctggccaacctataggctctttcctctttctgggctcaaccggtgttggaaagacggagcttgcaaaagcccttgctgagcagctatttgacagcgagaagatgttgatccgctttgacatgtctgaatttgttgggagtggatctgtgttgcgtctcattggagcacctccaaggttttgcatacccctgctcccttagtgaaactttacacattccatatttttcattattgacttgttttagtgctttcttggacatcttaaagctatcatggccatcaagatggcggacaattgacagaaaaagttaggacgcgtccttacagtgtcatcctttttgatgaggtggagaaggcagatccctcggtgttcaacgtgttccttcagctcctcgatgatggcatgttgactgatggcaaaggaaggacagtagatttcaagaacaccatcatcattatgacctcaaatctgggagctgagcacctaactgaaggagtgactggtgaaagaacaatggaagctgcacgggaccttgttatgaaacaagtttgttctagtcccgatctatcctgattttgaaatcctggactggctgcagtagcttctttctgattgttatatatactttgcacatgcaggttcagaagtatttcaggcctgaacttctcaacaggctgagtgagattgtgatatttgagccgctttcgcacgacaatcttaaggaggtcgtcaaaattcagatgaagagtgtcgttaccagtgtggctcacaagggcgtatctctacttgcaagtgatgatgccttggacgtcatcttgtctgaatcatacaacccagtaagtgcagattctttacaacatcatcacaagttcgctctaccattttgtaatgaccatgagatctttcagttcgtactaatatagttgaccatgcttccatctctttcagatgtatggggcaagaccagtaaggaggtgggtgcagaagaatgtgatgacaaagctctctgagatgcttattacaggagatgctggacaggggtcaactatttccattgacgctactgatgacaagaaggggctgaactttcaagtattgaaggaggaggtagtggttccgcgaggcaagaggccagtcgaggagcttcaaagcgactcggatagcgatgacgatgtgttcgagatcgcccccataccaaagaggaagaaaggtgattattagcatataggagcagcctgacaagtagctaggttgccacttttgggttatccatattatattagtgaattgcaacatggtagtatctcctttagcttgaacttatgccggttttagccagtgggcgttgtgtctgtgagaactcgcgactcatatggtaaggagggctgcttgcttgcttgcatcggctttcctccatgacgctgtaagagctgaatgagacgacctgatgtccttaatgcatgttactttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0537400, RefSeq:Os02g0537400