Difference between revisions of "Os02g0556900"

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(Created page with "{{JaponicaGene| GeneName = Os02g0556900| Description = DDT domain containing protein| Version = NM_001053669.1 GI:115446708 GeneID:4329669| Length = 4858 bp| Definition =...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0556900|
 
GeneName = Os02g0556900|

Revision as of 19:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0556900

Description

DDT domain containing protein

Version

NM_001053669.1 GI:115446708 GeneID:4329669

Length

4858 bp

Definition

Oryza sativa Japonica Group Os02g0556900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:21921999..21926856

Sequence Coding Region

21922385..21922535,21922957..21923045,21923130..21923291,21923422..21923805,21923888..21924228
,21924337..21924418,21924501..21924859,21925552..21925724,21925851..21925963

Expression

GEO Profiles:Os02g0556900

Genome Context

<gbrowseImage1> name=NC_008395:21921999..21926856 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:21921999..21926856 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctcttttcaagaggaaacctttctccttacttgagccccccaaggacttggattctaaggagaaggttttccaaattcggttcacaagggagatattccgagattaccaagactacataaacaggttgaatctttatcggcaaagggtttggtcatgtaagatatccggaaaatcaaacttgacttttgaagaagctttggtctccgagcatcatgcagtgtcaaaggctcagaaattacccacagaactgatggctcctgttcttcggatgattcaatacagcactcttggattatatgagcttgttgagaagatatatgctagcctgcaggaagctgtatttgaaggattagaattatatgctaaacaggatggtttagaggctgcttgcaggattttgaagattttagggtctgatggcaccaagatgtatgaagttggttggcttcttagggacaagactatcatcagtacgtcagtgatcaaaggtgaagacttgattcaccggaggccacctgttagtaggaatacgctgaagatttttattagagatgcaacttctcaaaatgccccatgggttatacatgaaaatcttgccaaaagatatggcatacccattgagcccccgaatgacatgatgtttggtgaaggtttgcaaaagaaagggaggaaaagacgtgaggatggacctatgggagatcccaaaaaaaagatgaagaacgatgaggaacacataaatgttccaattaagtacccaatagatgatctcttagtacaaccttctgcagatgatcatgctttattgaagagacctcctctggctacagattttagagtaccaaaatattctgtgggcgatctccttatggtatgggacttctgcttgtccttcgggagggttctgaatctatccccattttcactggtagatttggagaatgcaatttgccacaaagaaagcaatgcacttcttgtggaaatacatacagctatattccacttgcttattaaggatgaaggtgactatttcactattctgcggaccaagaaacggaagctaaaggtgactttagtaacatgggctgaatatctctgtgatttcttggaaatgacaaaaactgaagaactcaccagaaacattgcaacagtaagaaagggttattatagtcttattgatactgatatcaaacttaagattctccgggaactagtagaagaagctattacaacttctcctgtaagagagaaactaagtgaacgggtggaccagcggcaagcgctcgctgcgactaaaagagagagtactagaaaggcaaaggatgagcagaactcaagcattgatggattgcaagatgacaatgagagtgttgatgagcagggtaaggggaaagaagaaaaggataagaacaatatctctcgaagcaagacagaagggaaacgccatggggtacagcacctcgaaacagagattgaaaaattatccatccgttccagcccccttggaaaagacagacactataacaggtattggtttttcaggcgtgaaggaaggctttttgttgaaagtgcagattcaaaagaatggggatactacagcactaaggaagagctcgatgtgttaatgagctcactgaacgtaaaaggtttaagggagagagctctcaaacggcagctggacaagttgtacagtaagataagtaatgctctggagaaacgatcaaaagaaatcacacacaaattgttgcttgaagaggctgtattgcgccgttccacacgtgtccgggctcaaccaagggataacccatccatgtcattcctgaagtatgtcaacaaatggaaggataactaa</cdnaseq>

Protein Sequence

<aaseq>MPLFKRKPFSLLEPPKDLDSKEKVFQIRFTREIFRDYQDYINRL NLYRQRVWSCKISGKSNLTFEEALVSEHHAVSKAQKLPTELMAPVLRMIQYSTLGLYE LVEKIYASLQEAVFEGLELYAKQDGLEAACRILKILGSDGTKMYEVGWLLRDKTIIST SVIKGEDLIHRRPPVSRNTLKIFIRDATSQNAPWVIHENLAKRYGIPIEPPNDMMFGE GLQKKGRKRREDGPMGDPKKKMKNDEEHINVPIKYPIDDLLVQPSADDHALLKRPPLA TDFRVPKYSVGDLLMVWDFCLSFGRVLNLSPFSLVDLENAICHKESNALLVEIHTAIF HLLIKDEGDYFTILRTKKRKLKVTLVTWAEYLCDFLEMTKTEELTRNIATVRKGYYSL IDTDIKLKILRELVEEAITTSPVREKLSERVDQRQALAATKRESTRKAKDEQNSSIDG LQDDNESVDEQGKGKEEKDKNNISRSKTEGKRHGVQHLETEIEKLSIRSSPLGKDRHY NRYWFFRREGRLFVESADSKEWGYYSTKEELDVLMSSLNVKGLRERALKRQLDKLYSK ISNALEKRSKEITHKLLLEEAVLRRSTRVRAQPRDNPSMSFLKYVNKWKDN</aaseq>

Gene Sequence

<dnaseqindica>4322..4472#3812..3900#3566..3727#3052..3435#2629..2969#2439..2520#1998..2356#1133..1305#894..1006#acaaatcgaacgcccatttccccaacgcctcgcgccacccgcgccgatccgttcgcctccgccgccgccgcggccgcctcgcgggctccccggcgacccccccgctcgttcccgtgccgtgccgtgccgtgtcggcgtgtgcccccgccctgcctgacctgtcgtcggtgagatccgggagccctagttcttcctgttgttttggtttcctcgtacgagctgtggttgggggggttcgtggttggttgcgacgcggggtgaggtggtcgggttcacgccaccctcgagcgatgccaggacgggcgcgggaggtttcgccgtggtgggcggcggcgaggggattgttgtctggattctgaaggcggcttgggtgaggggatttcttgtggtggggggggggggtgagagaatggggggattttgagcgatgcgaggatttccgaatgctggattctggagcacgggggtccattttcgtgagctgagtggtcaggaatgctttgcgttgcacattttgggggcaaatgcgtgagagaaagagcagcctgagcttgtgcgactcatcatgtatttaagtgaaatgctatggttgctgattcgcacatcggaaattggccggttggattcgaatgggctaatctgttgttctgggttctgaatttcctgcttggatgattggtacatcacattttgcatatctgcgcggcttgagactggtcttttcccctctctgcctcgcaaaatgtggcgtgatcatctaaatattcatgcactgttgcctaattgttcttggcagtattatagattctttatccagttcacatggttaactctttaactatttaaatgtaaaccgtgtgcgttgctattatgtaggttggatcggaggtccaatgcctcttttcaagaggaaacctttctccttacttgagccccccaaggacttggattctaaggagaaggttttccaaattcggttcacaagggagatattccgagattaccagtatcctctttcatgacgccaatgcagctgaattgtggcattgcaggaattcatgccttttgcatttgcagtgcagtatgtgcactaatatttctccaatgcttgtgtccttaacaactcaattagagactacataaacaggttgaatctttatcggcaaagggtttggtcatgtaagatatccggaaaatcaaacttgacttttgaagaagctttggtctccgagcatcatgcagtgtcaaaggctcagaaattacccacagaactgatggctcctgttcttcggatgattcaatacagtatgtaatatttatgaaattccgttgtgctcctggatcttgatagtatattggttacagttgttttcttctttgttattctaacatttctcagttcttacattttttccctgtagacaaagctactagacatactaatactcaatttgctttttttaaaaaaagggcatgtgaaactgttggtcttttaattgtttgaacttttgtatatcctttaccgttcttttctacttattagtttcagcgacataatttccactatcataacttatctaattatatgttagtaaaacttgtaatgatcagtaattatttctagtgtgacaatcttaccttctttatcaatattccaatagttttattgcatgtgttctaaaacaatatctagaagagagtacagtataccaacctctttctaatctaagtatcttttgcattagtgatctggttttgatgtttactgatattaaggtatagctctgaattctctgcttggactgctaagctgctgacatgacaacctgtaataaataggcatgcatgcttactgttatgctttgcaattctaaagtatccatgtacctttttcctactatatgcgcttcattcaagaagcatcatagattgcttctcatttgtacgtttcacttaattagattggaaataatacttcattttaccttttgtttcaggcactcttggattatatgagcttgttgagaagatatatgctagcctgcaggaagctgtatttgaaggattagaattatatgctaaacaggatggtttagaggctgcttgcaggattttgaagattttagggtctgatggcaccaagatgtatgaagttggttggcttcttagggacaagactatcatcagtacgtcagtgatcaaaggtgaagacttgattcaccggaggccacctgttagtaggaatacgctgaagatttttattagagatgcaacttctcaaaatgccccatgggttatacatgaaaatcttgccaaaagatatggcatacccattgagcccccgaatgacatgatggtgagttggttatgtgcccctttcatctgtcctttatttccttgggtatgttacaatactaacacttgctttctttgtctagtttggtgaaggtttgcaaaagaaagggaggaaaagacgtgaggatggacctatgggagatcccaaaaaaaagatgaagaacggtgattcatctgaatctggcacctttgttgcaattgttctgttagcagccttttggctatggcattcttccaagatacttatcgatttttttttggtatgatttgcagatgaggaacacataaatgttccaattaagtacccaatagatgatctcttagtacaaccttctgcagatgatcatgctttattgaagagacctcctctggctacagattttagagtaccaaaatattctgtgggcgatctccttatggtatgggacttctgcttgtccttcgggagggttctgaatctatccccattttcactggtagatttggagaatgcaatttgccacaaagaaagcaatgcacttcttgtggaaatacatacagctatattccacttgcttattaaggatgaaggtgactatttcactattctgcggaccaagaaacggaagctaaaggttttctcatgcccatttctcgatctccctctttctccattgatgaaaccgtttcttaatcccttttttatttccttatcaggtgactttagtaacatgggctgaatatctctgtgatttcttggaaatgacaaaaactgaagaactcaccagaaacattgcaacagtaagaaagggttattatagtcttattgatactgatatcaaacttaagattctccgggaactagtagaagaagctattacaacttctcctgtaagagagaaactaagtgaacgggtggaccagcggcaagcgctcgctgcgactaaaagagagagtactagaaaggcaaaggatgagcagaactcaagcattgatggattgcaagatgacaatgagagtgttgatgagcagggtaaggggaaagaagaaaaggataagaacaatatctctcgaagcaagacagaagggaaacgccatggggtgagcatctgttctcaatccatgtacttgcatgtgatggacctttctctgtatttaacccatgttctgttattgtttaccacaattggtagtgagcctgattattatgcttactccctactttttgtaggtacagcacctcgaaacagagattgaaaaattatccatccgttccagcccccttggaaaagacagacactataacaggtattggtttttcaggcgtgaaggaaggctttttgttgaaagtgcagattcaaaagaatggggatactacagcactaaggaagaggtgactgttttgctctagttgatttctttttgttatttattgttgctacagtcgtgatcatattttgatattttggaatgacagctcgatgtgttaatgagctcactgaacgtaaaaggtttaagggagagagctctcaaacggcagctggacaagttgtacagtaagataaggtacatagatctttctgaaccttacaattggtcaacttagaacttttggttctgttgattgtagaaaggggctaacgttacacttgttcttaacgtgaaaaataatatttttgtttgtagcttcacatactatttttctgcaaaatgaatactgtgtatactggttttgctgtcctcttactcaataattactgcatctcatcgatgatacttgaagagttctcttataaattacctgctagttgattctggaagaagactaccatcgaaacttttatttgtttctgctatcatgtataattctatgatgtttaccattgctatattttattattcgtatcataagtagttagaaatatattggttgattcctactacaccaatcaattttcaactaatcatttcctgttctgtaacacagtaatgctctggagaaacgatcaaaagaaatcacacacaaattgttgcttgaagaggctgtattgcgccgttccacacgtgtccgggctcaaccaagggataacccatccatgtcattcctgaagtatgtcaacaaatggaaggataactaagtagccaagaggacagcttgtccgcaggtgggggaactgagctagctactcgatgacagggttttgttttcagaggaacatatatgaaggtctgatgaggtggtatgttatttgttagccaatcctcatggctgttctttgagcaatcatcactaggtagcaaaaccaattaacctgttggtttacagccttacactggactgatagagcgctaccagagctagtttttggagctatatacccagtgtaacttatcttacatgtaaacatggtattagcctcaggaaccatgagttgctaaactgatatgctgctgatgttatgccggttttggatttatcagtcgcaggggatacatttctctatcattatattgttttcacttg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0556900, RefSeq:Os02g0556900