Difference between revisions of "Os02g0565500"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0565500| Description = Similar to Pto kinase interactor 1| Version = NM_001053702.1 GI:115446774 GeneID:4329704| Length = 2897 bp| Definit...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0565500|
 
GeneName = Os02g0565500|

Revision as of 19:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0565500

Description

Similar to Pto kinase interactor 1

Version

NM_001053702.1 GI:115446774 GeneID:4329704

Length

2897 bp

Definition

Oryza sativa Japonica Group Os02g0565500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:22332594..22335490

Sequence Coding Region

22333084..22333215,22333298..22333384,22333493..22333625,22333735..22334008,22334297..22334423
,22334516..22334769,22334890..22334974

Expression

GEO Profiles:Os02g0565500

Genome Context

<gbrowseImage1> name=NC_008395:22332594..22335490 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:22332594..22335490 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcttgctgcggaggcgccgaggaggacagctacggcccgccggcgaaccaggccgctccgccgcccaacgtcaatgctcccgggaatagaggcgggccgagagggccgggggcggcgcggccgggcgggccgccgaagccggtgaacatcgacgtgccggcgataccgttcgaggagctgaagaagatcaccagcaacttcagcgaccgcgccctcatcggcgagggctcctacggccgcgtctacaacggcacgctcagcgacggccgcgccgccgtcatcaagaagctcgaccccggcgcctcccaggagaccgactccgagttctccgcccagatagcgatggtgtccaagctcaagaacgagtacttcctggagctcttgggctactgcttggaagacggcaaccgcatgctggcctaccagtttgcaaccatgggttctttacacaacattcttcacggtaagaagggagtccagggcgcggagcccggcccggttctgaactgggcgcaacgggtcaagatagcttatggggcggcgagagggctggagtacctccatgagaaagtgcagccatcgatcgttcatcgagatgttcggtctagcaatgttcttatattcgacgagttcagctcgaagatcgccgatttcaacctgacgaaccagggcaccgacaccgctgcccggttgcattcgactagggtgctaggaacatttggataccatgctccagaatatgccatgacagggcaaataaatcagaagagcgatgtttacagctttggcgtgattctattggagctactaaccggaaggaaaccagttgatcacaccatgccaaaagggcaacaaagtcttgtcacttgggctactccaagattgagcgaagataaagttaagcagtgcgtcgatccaaagctcaacaatgattaccctccgaaggctgtcgcaaagctagcagcagttgcagcattgtgcgttcagtacgaagccgacttccgaccgaacatgacgatcgtcgtgaaggcaatccagcctcttctgaatacaaaaccagctgggcctgcagagccaccacctgcctga</cdnaseq>

Protein Sequence

<aaseq>MSCCGGAEEDSYGPPANQAAPPPNVNAPGNRGGPRGPGAARPGG PPKPVNIDVPAIPFEELKKITSNFSDRALIGEGSYGRVYNGTLSDGRAAVIKKLDPGA SQETDSEFSAQIAMVSKLKNEYFLELLGYCLEDGNRMLAYQFATMGSLHNILHGKKGV QGAEPGPVLNWAQRVKIAYGAARGLEYLHEKVQPSIVHRDVRSSNVLIFDEFSSKIAD FNLTNQGTDTAARLHSTRVLGTFGYHAPEYAMTGQINQKSDVYSFGVILLELLTGRKP VDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNDYPPKAVAKLAAVAALCVQYEAD FRPNMTIVVKAIQPLLNTKPAGPAEPPPA</aaseq>

Gene Sequence

<dnaseqindica>2276..2407#2107..2193#1866..1998#1483..1756#1068..1194#722..975#517..601#gtggctcctttggcgcggaaagagggggagctcccgccattccccaccattaacctcttctcccggggaacaaaacaccgctgttcttccctttgccccccctcgatcgatcgccatcgatcgatctcgtgcgggaagcgatcgatctcgtgcgggaatctttgggggaggtaagaatttctaccgttttctgcatgccgatccagatcgcatatggagcatgcatgcatcctctgttttcttgatccacgatcccctcattgcttccgatgattgcttgatcatctggaaattgtgcgttgattttaatttcttttcagttaattttctgttcctcggaaagagattgatccgtttcgtgaattgattcttcagggatttaatctgttggtgtgcacgcgaggaattaatcgaaaatggtttgcaggtcgtgcgcgatgatccgctgagcggggggcggccaccagatcagcccgcgcatccaactccggcgagaggaggaggaggaagaagaagatgtcttgctgcggaggcgccgaggaggacagctacggcccgccggcgaaccaggccgctccgccgcccaacgtcaatgctcccggtgcgtctccacattcctcttctccggcggcggcggcctcctacattcctctcctcctttgctgaccgatttcgtgaccgtctcttggtcttcttctccggcgacggcggatggaagcagggaatagaggcgggccgagagggccgggggcggcgcggccgggcgggccgccgaagccggtgaacatcgacgtgccggcgataccgttcgaggagctgaagaagatcaccagcaacttcagcgaccgcgccctcatcggcgagggctcctacggccgcgtctacaacggcacgctcagcgacggccgcgccgccgtcatcaagaagctcgaccccggcgcctcccaggagaccgactccgagttctccgcccaggtgtgccccaaaacaccccacttcttcttcttcctcctcctcgcgacatgagccatcttagctttttgctcatcttcatctcgtcgccatagatagcgatggtgtccaagctcaagaacgagtacttcctggagctcttgggctactgcttggaagacggcaaccgcatgctggcctaccagtttgcaaccatgggttctttacacaacattcttcacggtaataagtcttttccatttcactactaccttatgtttttcttacataatggaatagaaaaccatcccagtcattactcaacgaactacagccgattattacaccaaatcactcgaagcaagtgtacttcaaagtaaacttaaaaaaacactcccaaatttaaagcaaacacgagataaagagcaacagtaaaatcccgacaagtttacgcccatgtgatcagggggcggagccaaaaaatctccacacgtagggctaagctaattaatggttttggatgtgatgcaggtaagaagggagtccagggcgcggagcccggcccggttctgaactgggcgcaacgggtcaagatagcttatggggcggcgagagggctggagtacctccatgagaaagtgcagccatcgatcgttcatcgagatgttcggtctagcaatgttcttatattcgacgagttcagctcgaagatcgccgatttcaacctgacgaaccagggcaccgacaccgctgcccggttgcattcgactagggtgctaggaacatttggataccatgctccagagtaagggagagaatgattgatttctcgcgtatcagactgtacagcatgctttgccttttgcaggatttacttgctgacgatttgttggtctgattatggtgatgttcagatatgccatgacagggcaaataaatcagaagagcgatgtttacagctttggcgtgattctattggagctactaaccggaaggaaaccagttgatcacaccatgccaaaagggcaacaaagtcttgtcacttgggtaaggagaagttttatccttcaacaaaagataacttattacaatatatcctatttcaatctttccatttccaatgatcttacatataccatgatctttgtgaggcaggctactccaagattgagcgaagataaagttaagcagtgcgtcgatccaaagctcaacaatgattaccctccgaaggctgtcgcaaaggtagctatactgtagcaaatctgacaaaattcagaaagcagcagtgagtgccattgttttttctttcatgattttttttcagctagcagcagttgcagcattgtgcgttcagtacgaagccgacttccgaccgaacatgacgatcgtcgtgaaggcaatccagcctcttctgaatacaaaaccagctgggcctgcagagccaccacctgcctgatcagattgtatgggagttctgctctaggcagacaggggaaaaaaaaccacacaaactttgcatggtttcctgtgttttcacatcaggcagtgtatgttttaagaagccatgcaacttggaggagcaccaattcggcatgattttttgtaaaacactgatccattggtaccacagggtatattacatatagagggggtattttgctaactggtgtaatgaattaagttattctttgtcgtgtcatggtgtaattttaaggtccttcaaaagcttgcatagaaccaaggattgcatgatgcattcccaagaacttccatggctgcctctttttcttatatttgtatagaactttggaattaatagtagtttttcttcttctttttttctgttggaactacaaagctggggctaaaatcctgttcctgaattcaggttttggccaggatggagattaaatggtgcacattgcatagatgtacacctaagatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0565500, RefSeq:Os02g0565500