Difference between revisions of "Os02g0583300"

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(Created page with "{{JaponicaGene| GeneName = Os02g0583300| Description = En/Spm-like transposon proteins family protein| Version = NM_001186114.1 GI:297721360 GeneID:9271960| Length = 3572 ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0583300|
 
GeneName = Os02g0583300|

Revision as of 19:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0583300

Description

En/Spm-like transposon proteins family protein

Version

NM_001186114.1 GI:297721360 GeneID:9271960

Length

3572 bp

Definition

Oryza sativa Japonica Group Os02g0583300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23345989..23349560

Sequence Coding Region

23345989..23346870,23347177..23347629,23348260..23348543,23348624..23348711,23348793..23349560

Expression

GEO Profiles:Os02g0583300

Genome Context

<gbrowseImage1> name=NC_008395:23345989..23349560 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23345989..23349560 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatagaagttgggtgcacagcagactattttcccctgaatacattgacggcgtcaaagaatttatgagtttcattcaggggaaattcaatgagaatgttgaaattctatgcccatgtagcagatgccttaatcagaagtaccaaagacaggctgttgtgaagaagcacatactgatgaatggtatggaaactacttatactcggtggattcatcatggagagagcttagatgtcaatgttattgacgatcctattgatatgaatgaaaataatgatggttccacaactatggtgacagaggatgacaactatggtgatcgtttggaaggaattttaggagacctacagactgcagcggcacaagcaagaccggatgtagaaaatcaagttggtgctgaagaacctcgtgataaagagtcatttttgaatattgtcatgagagaggcaaagcgtcaactttatcctggttgtaccaaattttcaaggttctcatttgtggtaaggcttcttcatatgaagtcattatataggatcagcaattctgctttttctgcacacatgaagctattggctgatgctttcccagaatgcaatacactcccaaaatcatatgatgaagcaaaaggcattctaaaggaaatgggtcttggttatgaatcaatacatgtgtgctacaataattgtgtgctgttcagaaaggaatatgagaagcatgacaattgctcggtttgtggtctctcgagatggaaagatgcagaaagaaagaagattccacaaaaagtgttgcggcattttccattggcacctaggctaaagaggatgttttcgaccaaagaagcatcagaagcggcacagtggcacaagttaaagcgacagcccctttgggcaggtgttgatacttatgatgctattactggcaaatcatttaaacttcgtgcagcggttttgtggtgcatccatgattacccagctttgagtactctctcagggcgtacaacaaggggctattttgcttgtctccattgtgacaagcatcctctttcatatgccttaaggagcaaaattggttattttgggcacttccgtttccttccaaaggaacatcctttgaggagaaacaatgagtttactggacttcacgaaagcaatgatccaccaggtaaattctgtacagaagagttgctggctgaattggagagagttaaagacgtcagacctgggaagccacaaggaactgggaaaaggaagcgttccaactctgaagggggtcatgtggaaatttggagccggatggttagtttatggaagttgccatattggaaaaaactaaagcgatatgtgaggaataggtcacgaccagaaggttcaattgccgaggcttatattgctgatgagtgtctgacattttgctctaaatacatggacgatgttgaaacaagatttaatcgggagccaagaaataaaggtttctccaatgaagaagcttatggtgttgatgtttttgggcatggagttaattttacttctgcacctgaatatgtatatgatgaaaatggcattgatcaaatggtgtggtttgtgctaaacaactgtgcccaagttgagtattacgtcaatttgttcatagaagagttagagacacaaggggtgcctaacattgaaagaatgcttcgacaaggatttcagacctggtttaggaaccatattttgaagaagtatagtacaaatccagaagaggtggatgttgatatcttctccttggcatgcggtcctgatttgagagttagaaaatactcctcgtgcatagtgaatggtgtgcggtttaacacagttaaccgtgacaagaacaagaagacactgaacagtggagtaatgtcacaagctacacataatggtcagttaattgatttttttggaaacataaaagagataattcagttggactataacttagaggagaggtccgtagttttgtttgagtgtgactggttcaaactggatggaaagaggactgcacttaaagatgatggcttttttaaaagcatcaatgttggaagtttgtggtacaagaatgattgtttcatattggccactcatgctacgaaggttttctatttgccagatacaaagctgggtgaaaattggcaagttgtacagacatttgaccataggcatctttataacgtaagtcagacggaggttagtgctactgcatatcaagaagacgagtgctatgatgaggaggatccacgccgaccagtttctagcattatatatgatacgcctttaaatagagatgatgagcgtggccctgtttttgaagctgctgaaattgctcggttgatgaaagaatctagcaaagaagtgaatgtcattggtgatgaagatgaagatgaagaagatgacacacttatggagtattttaacgaagaagatgactcagttatggaggtcgatagtgacgacgaatag</cdnaseq>

Protein Sequence

<aaseq>MDRSWVHSRLFSPEYIDGVKEFMSFIQGKFNENVEILCPCSRCL NQKYQRQAVVKKHILMNGMETTYTRWIHHGESLDVNVIDDPIDMNENNDGSTTMVTED DNYGDRLEGILGDLQTAAAQARPDVENQVGAEEPRDKESFLNIVMREAKRQLYPGCTK FSRFSFVVRLLHMKSLYRISNSAFSAHMKLLADAFPECNTLPKSYDEAKGILKEMGLG YESIHVCYNNCVLFRKEYEKHDNCSVCGLSRWKDAERKKIPQKVLRHFPLAPRLKRMF STKEASEAAQWHKLKRQPLWAGVDTYDAITGKSFKLRAAVLWCIHDYPALSTLSGRTT RGYFACLHCDKHPLSYALRSKIGYFGHFRFLPKEHPLRRNNEFTGLHESNDPPGKFCT EELLAELERVKDVRPGKPQGTGKRKRSNSEGGHVEIWSRMVSLWKLPYWKKLKRYVRN RSRPEGSIAEAYIADECLTFCSKYMDDVETRFNREPRNKGFSNEEAYGVDVFGHGVNF TSAPEYVYDENGIDQMVWFVLNNCAQVEYYVNLFIEELETQGVPNIERMLRQGFQTWF RNHILKKYSTNPEEVDVDIFSLACGPDLRVRKYSSCIVNGVRFNTVNRDKNKKTLNSG VMSQATHNGQLIDFFGNIKEIIQLDYNLEERSVVLFECDWFKLDGKRTALKDDGFFKS INVGSLWYKNDCFILATHATKVFYLPDTKLGENWQVVQTFDHRHLYNVSQTEVSATAY QEDECYDEEDPRRPVSSIIYDTPLNRDDERGPVFEAAEIARLMKESSKEVNVIGDEDE DEEDDTLMEYFNEEDDSVMEVDSDDE</aaseq>

Gene Sequence

<dnaseqindica>1..882#1189..1641#2272..2555#2636..2723#2805..3572#atggatagaagttgggtgcacagcagactattttcccctgaatacattgacggcgtcaaagaatttatgagtttcattcaggggaaattcaatgagaatgttgaaattctatgcccatgtagcagatgccttaatcagaagtaccaaagacaggctgttgtgaagaagcacatactgatgaatggtatggaaactacttatactcggtggattcatcatggagagagcttagatgtcaatgttattgacgatcctattgatatgaatgaaaataatgatggttccacaactatggtgacagaggatgacaactatggtgatcgtttggaaggaattttaggagacctacagactgcagcggcacaagcaagaccggatgtagaaaatcaagttggtgctgaagaacctcgtgataaagagtcatttttgaatattgtcatgagagaggcaaagcgtcaactttatcctggttgtaccaaattttcaaggttctcatttgtggtaaggcttcttcatatgaagtcattatataggatcagcaattctgctttttctgcacacatgaagctattggctgatgctttcccagaatgcaatacactcccaaaatcatatgatgaagcaaaaggcattctaaaggaaatgggtcttggttatgaatcaatacatgtgtgctacaataattgtgtgctgttcagaaaggaatatgagaagcatgacaattgctcggtttgtggtctctcgagatggaaagatgcagaaagaaagaagattccacaaaaagtgttgcggcattttccattggcacctaggctaaagaggatgttttcgaccaaagaagcatcagaagcggcacagtggcacaagttaaagcgacagcccgttgagaataatatgagccacccagctgatggcgaggcatggcaagattttgaccgtgaatatcctggttttgcaaaggatgcaagaaaccttagacttggcctagctactgatgggttcaatcctttttcagaaaagaacacaaaatatagcatgtggcctgtgtttgttgtgccctacaacctagcaccgtgggagtgcatggaggaatcaaactttatgatggctttgcttattccaggtccgaaatcacctgggaaggactttgatgtatttttacagcctcttgtagaggatttacttgagctttgggcaggtgttgatacttatgatgctattactggcaaatcatttaaacttcgtgcagcggttttgtggtgcatccatgattacccagctttgagtactctctcagggcgtacaacaaggggctattttgcttgtctccattgtgacaagcatcctctttcatatgccttaaggagcaaaattggttattttgggcacttccgtttccttccaaaggaacatcctttgaggagaaacaatgagtttactggacttcacgaaagcaatgatccaccaggtaaattctgtacagaagagttgctggctgaattggagagagttaaagacgtcagacctgggaagccacaaggaactgggaaaaggaagcgttccaactctgaagggggtcatgtggaaatttggagccggatggttagtttatggaagttgccatattggaaaaaactaaaggtgagacataatcttgatgtgatgcacattgaaaaaaacatatgtgagaacctaattgggacaattctcaatataaagggcaagacaaaagacacagctaaagctaggcttgatttgaaagatttgggtattaaaaaggagctgcaatttagagaggatggagagatgcctcatgctagatataccttgtctactgaacagaagaaggctttttgtgcttttttacaagaggtcaagtttccagatggatttgcttccaacatctcaagatgtttaaatgctgagggaacaacggtacaggggctgaaaacacatgattgtcacattcttttgcaaagaattttgcccgctgccatgagaggatttctggacagtgatatttatgaagcaatagctgagttggggatgttttttaggaaattgtgcagcagaactcttaacaaggatgtgctggttcaaatgaagaaagaaatccctataattttggtgaagcttgagaaaattttccctccagctttctttgatgtgatggtacaccttgctatacatttacctgatgaggcattgctcaggggtcctgtgcaatatgggtggatgtacccaattgaaaggcgactatatactttgaagcgatatgtgaggaataggtcacgaccagaaggttcaattgccgaggcttatattgctgatgagtgtctgacattttgctctaaatacatggacgatgttgaaacaagatttaatcgggagccaagaaataaaggtttctccaatgaagaagcttatggtgttgatgtttttgggcatggagttaattttacttctgcacctgaatatgtatatgatgaaaatggcattgatcaaatggtgtggtttgtgctaaacaactgtgcccaagttgagtattacgtcaagtatgttctatatacttacttttagacttcttctatatgctacctttgtgttgcacactaatttatttttttttctgcagtttgttcatagaagagttagagacacaaggggtgcctaacattgaaagaatgcttcgacaaggatttcagacctggtttaggaaccatgttagtgttcattgtcaagttatatattgcataatgtaacttctatttttctaatatatgtgtgttgtatgcatgtggcagattttgaagaagtatagtacaaatccagaagaggtggatgttgatatcttctccttggcatgcggtcctgatttgagagttagaaaatactcctcgtgcatagtgaatggtgtgcggtttaacacagttaaccgtgacaagaacaagaagacactgaacagtggagtaatgtcacaagctacacataatggtcagttaattgatttttttggaaacataaaagagataattcagttggactataacttagaggagaggtccgtagttttgtttgagtgtgactggttcaaactggatggaaagaggactgcacttaaagatgatggcttttttaaaagcatcaatgttggaagtttgtggtacaagaatgattgtttcatattggccactcatgctacgaaggttttctatttgccagatacaaagctgggtgaaaattggcaagttgtacagacatttgaccataggcatctttataacgtaagtcagacggaggttagtgctactgcatatcaagaagacgagtgctatgatgaggaggatccacgccgaccagtttctagcattatatatgatacgcctttaaatagagatgatgagcgtggccctgtttttgaagctgctgaaattgctcggttgatgaaagaatctagcaaagaagtgaatgtcattggtgatgaagatgaagatgaagaagatgacacacttatggagtattttaacgaagaagatgactcagttatggaggtcgatagtgacgacgaatag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0583300, RefSeq:Os02g0583300