Difference between revisions of "Os02g0587800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0587800| Description = Virulence factor, pectin lyase fold family protein| Version = NM_001186118.1 GI:297721368 GeneID:9270535| Length = 9...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0587800|
 
GeneName = Os02g0587800|

Revision as of 19:17, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0587800

Description

Virulence factor, pectin lyase fold family protein

Version

NM_001186118.1 GI:297721368 GeneID:9270535

Length

974 bp

Definition

Oryza sativa Japonica Group Os02g0587800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23508820..23509793

Sequence Coding Region

23508886..23508967,23509176..23509513

Expression

GEO Profiles:Os02g0587800

Genome Context

<gbrowseImage1> name=NC_008395:23508820..23509793 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23508820..23509793 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgtccagggctttacttgtgttcgctctgctgctcgccgctgccttcctcgtcaactgcgctcgacaagaacctcagcccaacgagggaccggcagctgaccccaacgccggcggcggcggcggaggcggcggcgacggatcatcgggctacgacgacggcaaagtgtccaagtccggccaccggccgcaggcgaagtactataatggccaccggccgcaggggaagtatggtggccatcgtccgcaggggaaatactacgggtacagcgaatgcggtggcggcggtgacgacggcgactgcggcggtccatgcgagcatcgtcgctgtgagtacggctgctgcgagggcgggtacggcggcgaccgcggccaccggtgctgcgatcacggcgagttcggcggccgccactag</cdnaseq>

Protein Sequence

<aaseq>MASSRALLVFALLLAAAFLVNCARQEPQPNEGPAADPNAGGGGG GGGDGSSGYDDGKVSKSGHRPQAKYYNGHRPQGKYGGHRPQGKYYGYSECGGGGDDGD CGGPCEHRRCEYGCCEGGYGGDRGHRCCDHGEFGGRH</aaseq>

Gene Sequence

<dnaseqindica>67..148#357..694#aaagcttctcttcttcacgcgcttgcagtaaatcgatcttaatctcagctagctagctagctagccatggcgtcgtccagggctttacttgtgttcgctctgctgctcgccgctgccttcctcgtcaactgcgctcgacaagaacctcgtgagcttccgcaccaacttcatgcacaaattacctaattaaagatcgagtccacactccacacgcacacaaaaattaatctcccaagtcaacacccatgttaattactgttgatcttttccttgttcttgcatatatgtatatgcgtgtatatatacttttcggatgagaaacgtactcacgtatatatttgaatgtgcacttgcagagcccaacgagggaccggcagctgaccccaacgccggcggcggcggcggaggcggcggcgacggatcatcgggctacgacgacggcaaagtgtccaagtccggccaccggccgcaggcgaagtactataatggccaccggccgcaggggaagtatggtggccatcgtccgcaggggaaatactacgggtacagcgaatgcggtggcggcggtgacgacggcgactgcggcggtccatgcgagcatcgtcgctgtgagtacggctgctgcgagggcgggtacggcggcgaccgcggccaccggtgctgcgatcacggcgagttcggcggccgccactagctagcccgatcatatcatatcgcatgcgccgccgatcgatcgatgacgaccctattggctatagcagctattagtctattaattactgcccatcacatactgcagtagaggtttggtttagttataataaaaactgtcgttattcgcaagtgtgtatctgtatatacgtagtttggtactccatataattaagtaatgtattgtacgtgtcaagtgtgctatgtatgaaatatgaatagatcacacgtggaataaaagagcgatagagcggactggtggg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0587800, RefSeq:Os02g0587800