Difference between revisions of "Os02g0598400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0598400| Description = Lipovitellin, superhelical domain containing protein| Version = NM_001053867.1 GI:115447104 GeneID:4329876| Length =...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0598400|
 
GeneName = Os02g0598400|

Revision as of 19:18, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0598400

Description

Lipovitellin, superhelical domain containing protein

Version

NM_001053867.1 GI:115447104 GeneID:4329876

Length

7119 bp

Definition

Oryza sativa Japonica Group Os02g0598400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:24130411..24137529

Sequence Coding Region

24134032..24134207,24134594..24134808,24134899..24134997,24135078..24135586,24135671..24136428
,24136522..24136720,24137158..24137313

Expression

GEO Profiles:Os02g0598400

Genome Context

<gbrowseImage1> name=NC_008395:24130411..24137529 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:24130411..24137529 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtttcccaattttggtttaatgtggttgaggctattagagaccagcattctgttgaaaggttggcggaagagatgttgcgccaacttgcatcacaacatacaagcgatgaggaggcatactggattctgtggactttgtttaatcagagcttcatgcacaaaactgtttttgagggcaatgtttgttgacaaatttttgcgttggaaaacattccctctatgttgtctgagatggattcttcactatgctgtctttgaattgccaccaaattcaggcatagaaacacagaagcaaaggacatcgagcttccttggtacactgcaaactttagtcagtgtttggtccaagaaagagtttgtccaggcatactcagtggagcaacaagcttacatcactgcagcaattgggttgtgtttggagaagatgtcaaaaagagaattagaaacaactaaagatgtattgaacaatattcttgaaggtgtaagctgtaggttagagagtccaattgatttaatccggaagatggccagtgctattgcattgacattttctaaagttgttgatccaaacaatcctctataccttgatgataactgttgtgagaatgttgagtgggactttggggttttatctccgaaggaaatcacagccccttcaaaggatgtagaacttataagcaaactgaaaccatctttgcctgagaacaagaaacatgctggtgagagaagggcaaaggctattaaacatgatacttcagagaacagggcaaaaatcattgagatcaaatcactagattcttgtgaaacgtctggttctgctgtgaatgggcatttcggagaggaagaatgtgatgaggaaataatgaacattgatgcctccagtgattcatccctggagccatatgatctgtcagacgatgactcagatttgcagaagaaattcacccaattaaaagatcttgctgctgcactacgaaaacctgatgatccagacggtgttgaaaacgctctgagttctgccgaaaagcttgtgagagcatcacctgatgaactacgccacaactcaggtgatcttgttagagcacttgtgcatgttcgatgttctgacgtggcaatggaaggagaggaagattctgctgaagaaaagagacagaaggcattagttgccttgctggtaacctgcacatttgaaccattagatgttctcaccaagttgctgtactcatcaagcgtggatgtaagtcagcgcattttgattattgatgttatgactgaggccgcacaggagcttgcggaaactaaaattgtaaggagagagctgcggcatggaaacttgatatccgacacctctccctcttggctagttcctagtgatcagggacctgctggtgcaggtccttggagggaagtctcagaatcaggaacacttctgaattggtcacaccggtatgaaagagaagttccatctagatctggtcaagttaaatcaggaaaatctcgtaaatggggtcttggaaaagctaaagatttgcagacagagtggtcaaaaaacagatttcctttatatgctgctgcttttatgctccctgttatgcaaggatatgataaaagatcacatggtgttgacttgctcaatcgggactttgttgtcctaggtaaattgatatacatgcttggtgtctgtatgaagtgcatggcaatgcatccagaagcatcagctgttgccccagctcttcttgatatgatcagatctagggctgtttcgcaacatcccgaagcatacgtcaggaggtctgtgttgtttgcagcttcttgcatactgatagcgctgcatccgtcgtatgttgcatcatctcttatagaaggaaatcaggatgtttctactggtttggaatggatacgcacatgggctcttcatgttgcagaaacagatcctgatacagaatgcacatcaatggctatgacctgcctgcggcttcattctgagatggcccttcagacatcacgagcactggaatcggcggatcacagcaaggccagcagcagcagcagcaggtcgctaccttctaagcttgataacatcatcataccatttgccaacatgatgtga</cdnaseq>

Protein Sequence

<aaseq>MFPNFGLMWLRLLETSILLKGWRKRCCANLHHNIQAMRRHTGFC GLCLIRASCTKLFLRAMFVDKFLRWKTFPLCCLRWILHYAVFELPPNSGIETQKQRTS SFLGTLQTLVSVWSKKEFVQAYSVEQQAYITAAIGLCLEKMSKRELETTKDVLNNILE GVSCRLESPIDLIRKMASAIALTFSKVVDPNNPLYLDDNCCENVEWDFGVLSPKEITA PSKDVELISKLKPSLPENKKHAGERRAKAIKHDTSENRAKIIEIKSLDSCETSGSAVN GHFGEEECDEEIMNIDASSDSSLEPYDLSDDDSDLQKKFTQLKDLAAALRKPDDPDGV ENALSSAEKLVRASPDELRHNSGDLVRALVHVRCSDVAMEGEEDSAEEKRQKALVALL VTCTFEPLDVLTKLLYSSSVDVSQRILIIDVMTEAAQELAETKIVRRELRHGNLISDT SPSWLVPSDQGPAGAGPWREVSESGTLLNWSHRYEREVPSRSGQVKSGKSRKWGLGKA KDLQTEWSKNRFPLYAAAFMLPVMQGYDKRSHGVDLLNRDFVVLGKLIYMLGVCMKCM AMHPEASAVAPALLDMIRSRAVSQHPEAYVRRSVLFAASCILIALHPSYVASSLIEGN QDVSTGLEWIRTWALHVAETDPDTECTSMAMTCLRLHSEMALQTSRALESADHSKASS SSSRSLPSKLDNIIIPFANMM</aaseq>

Gene Sequence

<dnaseqindica>3622..3797#4184..4398#4489..4587#4668..5176#5261..6018#6112..6310#6748..6903#aggttcgtcctgtgtttcccttcccccgccccccccccttcccatggcgagcaacccaagcagctccgcggcgggcggcggcggcgaccatggtggcgcgcgcctcgaagacctagcactggacaaggtggcggaggcggccgacgcggtcgccgccgcgtcgagcgccggcgaggtcgtccgcgcgatccacgccgtcgcggccatcgtcttccccgtcgactccgctaccgtagccggtgaggctccgaatcctaatccgacatgccccctattcccctttatctcattcgctgtcacttggggtgtctgatggcctctcttgtccgcgtgtgctctcctgtaggtaccgtggacgaacccttcaggagccaggtgaagctctgtgctaattctaggccttttatttcgtgcatctgagaaaaatgacttgtagttttatcattgctatttttggttctggcgcaaacaatgatgtgtgattgctaataatcatggaagggtagccggtgatctctacaatgcaagtcatggatggaatccacaagtcaggcgtttggggtgttgaatgctggctgttttgctgaatgtcttcggtttattttcatctttgagctgctgtagttaacatggctgtcatgttttgggtcaggccccatgggcttgtgtgatgtttagtttctttacttgctctgaaccttttgtaagaatcttatcatttcgttaatgaaatgggagggtctccgctctctgtctcaaaaaaaaaaaatcatggaaggggtctgtgataaaaaaaaaggaggtcttgagtttttgttttgacttgcaatcacttaggactgtatgccgaaatggagcattaaggtatcatagtgaacactattggttacatggacaatatttcagccactgtattgtcataattgcggtgcatatatttgaggaaattgatctctggaaggaattactccgaaactggattgataagcatccacaaaattttccaattgataagcatcaaattgataaacctatagctttaataatggtcacacaatgggtaatcaaattgcaggaccttgctaggtgagctgtagcagcatactccctccatactcacaaaggaagtcgtttaggacaatgtttaagtcaaaccttgggaatataaatcatgaataactctcaagttgttgagtttgaaaatgtaaaaattatatgaatatatttgtcttgaaaaatactttcataaaagtatacatatatcacttttcaataaatatttttatagaaacaagaagttaaagttgtgttttggagaccgtgtcgctgtcctaaacgacttcctttacgagtatggagggagtacattttgtaaaacctgtgtcatttgataattcattcagaatacagaggatcaagtttcatgcttgagagataaattagtatggatattcaaagacacatgcttccttcaatatgattcagccaaatagccaattggagttccatccttttaggccatgatgtaacagggagaattattttctgtactttcagattattaatggtgtaagcctcagcagtgatgaacggggatcttggaggcatgctttttgccatggtccagcgtttcctactctatctaagattttgcttggccgtaagtttactcttgaatttgtcactgcaaacatacttgtaccattgatatttttttcatgtacaactctcccgtttgcttataatgttatctgccagctacaatctctacaagtcatacttcatttgtattgtttaccaatctctacaatttgattactatacgcttaaaacttcttgattgttcatcacagttaggccatttgcaaagttccttcagttataatcccattctcacactttggttgtccagatgttgccttgaagtggttacatcagattcgtgcctgtgcaaggaaggaaatctgtgattccttttttgtcaaaggatctccaactgaagtcattcaagctcttgttcctgctttgtctcataaagtaggctctaaggaagatcataacattatatgttcaaacattgaaagcttattaatgaacaatctatcaattctatttcattacacctgaatcttttattggtccaactttgtttgcttttcctataagtctatagcacatccttctttttgacaactccctgtgagttcacaacttcaaatattatacccaaaccttgtaggacaaattttcaagtttcaacacttcgactgcatgggtctgtactaatatcatgtatttgcccaatagtctgctttgtattcttaagtctattttatgctcgagtcattaggaatcaaacaatctagcatgcacacttcatctgaaaattcatgggcctgttcctatctggtatcttcctttttttttctcacctgataaccatatttgagcttagtttgtcattattttcccacatttcaggctgttaattctatgttttgtcgagaataagggggtcagccagattattgcagagtttactgtaagcagcaagcacgatgatcacaacttgaacccaggcagagcagctttgatttcaagggttgctcaactacttgcgtctgttccagataaaacaagaatgggagcttcacctgcactgacatcatcgtgtcctcacccccactgctccaaacacaaacatctttgttaattttttttcctttccttttattttgttagctttttctcagctaatacgtatttatttgcactatgtttgttcctccaaactgtaattccttgatggaaaccaaggtcattcttcaagtgtgctgtcgatcagcttcttgttgcaactgaacaagcggctatggagttggctgctgacgaagatgctaatgggctagatccctctaattctgtgttcctcttcgtgggtgaagtgatatctcgtgctagccgtcgtggatctactggtgagtattcatccttcaggatgtagcttgacgtgtgcagtgtgctattagtttatctgctttgacatttctatctactgatgggggcagttctagttggtgcaggaatggttttgcaatgcatttgtgtctggtaggattatagtgtattcaactcaacatttatgtttgcgatggtctgctctagggtgatggagcttatccttttttgtcctcatataatccttaatccttatgcaaactaattcaacacagtggtacacatttggttttctctgatggtccactaatagtcccttcagctgaaattttaaacatttaaggtagcctgtttttgggtttttatccagtgttcacttttggcaatcacagtagacttggggtctgcaatgcttgagatgtcacccaggatagcagtgcctcatgtcatggctgatcatcctagcacactgttctagtcattaacaacttcttgtttgtaatctatgtagccatccttttccctactatttgttgtatttctgataatatatcttgctcttttcaggcattttaggtgctgagctgattcctaggatccgtagtcacttaaagagatgtatggaatctgatcataaaaccataagtcctgacaagatcaagcatgtttcccaattttggtttaatgtggttgaggctattagagaccagcattctgttgaaaggttggcggaagagatgttgcgccaacttgcatcacaacatacaagcgatgaggaggcatactggattctgtggactttgtttaatcagagcttcatgcacaaaactgtttttgaggtgagaatgagatagtacatgtgcgcattttaatactatgcaacacttgacgtgcttgttttttagtttatccacattggttcatctgtgtctggcatgctacatttatctgtgaaggaaaaagtacttctgaggtttatttttttcagttagtggatgttttaggtaaggtgaatgatagtcttcagataccctgtatgtctttgttacttcattcctatgaacgacaaacagggtgccatgtatgtttacttaactttcagcatgggcttatattatgggtgtctattcagcgtataattggcatgcagcgattgatcaaataatcttcaacgtgtcttttcttttcttttctttcatcctttaattctctgtgctttcttcagggcaatgtttgttgacaaatttttgcgttggaaaacattccctctatgttgtctgagatggattcttcactatgctgtctttgaattgccaccaaattcaggcatagaaacacagaagcaaaggacatcgagcttccttggtacactgcaaactttagtcagtgtttggtccaagaaagagtttgtccaggcatactcagtggagcaacaagcttgtatcctttgaggcactcaaaactgtattacattacacactttttatttgcaaattatcatttgacttgttccccttaaacaacactcagacatcactgcagcaattgggttgtgtttggagaagatgtcaaaaagagaattagaaacaactaaagatgtattgaacaatattcttgaaggtgtaagctgtgagtatcccccccccaccccccctgcattagcttatcatattattattatggtaatactgaatgctcttttgctgtaggtaggttagagagtccaattgatttaatccggaagatggccagtgctattgcattgacattttctaaagttgttgatccaaacaatcctctataccttgatgataactgttgtgagaatgttgagtgggactttggggttttatctccgaaggaaatcacagccccttcaaaggatgtagaacttataagcaaactgaaaccatctttgcctgagaacaagaaacatgctggtgagagaagggcaaaggctattaaacatgatacttcagagaacagggcaaaaatcattgagatcaaatcactagattcttgtgaaacgtctggttctgctgtgaatgggcatttcggagaggaagaatgtgatgaggaaataatgaacattgatgcctccagtgattcatccctggagccatatgatctgtcagacgatgactcagatttgcagaagaaattcacccaattaaaagatcttgctgctgcactacgaaaacctgatgatccagacggtgtaagtttctatctagtgctacctgtactttccagagcaaattattgtaaaattctgatcatcctccctttttttttacccaaggttgaaaacgctctgagttctgccgaaaagcttgtgagagcatcacctgatgaactacgccacaactcaggtgatcttgttagagcacttgtgcatgttcgatgttctgacgtggcaatggaaggagaggaagattctgctgaagaaaagagacagaaggcattagttgccttgctggtaacctgcacatttgaaccattagatgttctcaccaagttgctgtactcatcaagcgtggatgtaagtcagcgcattttgattattgatgttatgactgaggccgcacaggagcttgcggaaactaaaattgtaaggagagagctgcggcatggaaacttgatatccgacacctctccctcttggctagttcctagtgatcagggacctgctggtgcaggtccttggagggaagtctcagaatcaggaacacttctgaattggtcacaccggtatgaaagagaagttccatctagatctggtcaagttaaatcaggaaaatctcgtaaatggggtcttggaaaagctaaagatttgcagacagagtggtcaaaaaacagatttcctttatatgctgctgcttttatgctccctgttatgcaaggatatgataaaagatcacatggtgttgacttgctcaatcgggactttgttgtcctaggtaaattgatatacatgcttggtgtctgtatgaagtgcatggcaatgcatccagaagcatcagctgttgccccagctcttcttgatatgatcagatctaggtatgccaagcctaaaacaagcatttccgtgttaaagactttcttagttataaccaagtggtacgattttgacattggattttgtttctgcagggctgtttcgcaacatcccgaagcatacgtcaggaggtctgtgttgtttgcagcttcttgcatactgatagcgctgcatccgtcgtatgttgcatcatctcttatagaaggaaatcaggatgtttctactggtttggaatggatacgcacatgggctcttcatgttgcagaaacagatcctgatacagaatgcacatcagtaagtactctggtctatatctgttatcgatcacttgttcgtgttttgttcgtcgacgtagagagcaattatggtataataggatgacatttgtttcttaaaaccacacacaataataataggtcattttttgacgaacaaaggagtacagttatgctggttttgtatcaaagtttgtctgcatcgcctaatcatttcagtaacctacccttatatgctttagttttctgtaacctactcatttctctcattccttcagtatacaaattcagtgacccagctcttttcagcaatttgtaacgaaaaacaggacatatttttacttataagctggaaaccagtttttacttaaaagagaccaattcagtataagctggaaactcagtaacttttcacactgtcatctaactcctcccattggcatgtttgtcttcaagatggctatgacctgcctgcggcttcattctgagatggcccttcagacatcacgagcactggaatcggcggatcacagcaaggccagcagcagcagcagcaggtcgctaccttctaagcttgataacatcatcataccatttgccaacatgatgtgatcgatgtactagattaagttgtaaataagcatatattatcttgccatgtaatattagaaattccaggtcagctaattctgattaggcttgatattgtcatattacagggttttttaatctgggatttgaaaatgctagaatttttgtcgattcgtgtggagattgtatggaagttgtcctgatccagattaaagagaattgatgaaaattgtaccc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0598400, RefSeq:Os02g0598400