Difference between revisions of "Os02g0824300"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0824300| Description = HMG-I and HMG-Y, DNA-binding domain containing protein| Version = NM_001055109.1 GI:115449880 GeneID:4331204| Length...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0824300|
 
GeneName = Os02g0824300|

Revision as of 19:25, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0824300

Description

HMG-I and HMG-Y, DNA-binding domain containing protein

Version

NM_001055109.1 GI:115449880 GeneID:4331204

Length

4142 bp

Definition

Oryza sativa Japonica Group Os02g0824300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36302184..36306325

Sequence Coding Region

36302533..36302760,36303007..36303168,36303609..36303740,36304416..36304483,36305087..36305681

Expression

GEO Profiles:Os02g0824300

Genome Context

<gbrowseImage1> name=NC_008395:36302184..36306325 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36302184..36306325 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgggagggagtccacagtggcgtcaggctccaacttctcctccttctatgtgcagcaccggggcattggcgtgccgggaggctccgggcacccggccgggctccacggcccgccgcccggtggatatcggcagcatcttgatgcagtctctgcggggtaccctttccagccccctcacattgggggttcccacattgggcagggttaccaccatgttgatgcctcagcccctgtcgcgcagcacggcagtggtggcggtggtggtggtatggacattggcatgggtgtcgaaatgagcgcggatgctaaaggggatcaggggagtggtgctggccaggatgagccggtgaagaagaagcgggggaggccgaggaagtataagcctgatggggcggtcacgctggggctctcgccgtcttcgtcgacgcctcactcgtcgacctcggcgatgggtacaatggtgaccacaccaggctcagggtttgggtcgggggcaggatcggggggttcggggtctggtgcccttacagagaagcgtggccgagggcggccacctgggtctggaaagatgcagcagttggcttctcttggaaaatggtttcttggttctgttggaacaggttttactcctcatgtgattattatttcaccaggagaggatgttgctgccaggataatgtccttctcacaacagggcccaagggcagtgtgcatcatctcagcgacaggagctgtatccacagcaacccttcatcaggattcaaactctggtggtgtggttacatatgagggtcgatttgaaatcctgtgcctgtctggatcatatttggtgatagaggaaggtggttcgcgaacccggagtggaggcctctgcatagctctgtgtggccctgaccacagggttattggtgggagtgtaggtggagtcctgacagcagctggaactgttcaggtgatagtggggagcttcatgtatggtgggacaaagaaaaataaagcgaaagctgagcaagagacggagaataacgaagagccaattggcggtgaggaggagacccccacaatggcactgccagatcacaacatgccgcatcatacgatgggtggatggtcggctgggttgatgaggcagatggactcaagaactccaaacatcgacatcaactctattcgcgagtaa</cdnaseq>

Protein Sequence

<aaseq>MDGRESTVASGSNFSSFYVQHRGIGVPGGSGHPAGLHGPPPGGY RQHLDAVSAGYPFQPPHIGGSHIGQGYHHVDASAPVAQHGSGGGGGGMDIGMGVEMSA DAKGDQGSGAGQDEPVKKKRGRPRKYKPDGAVTLGLSPSSSTPHSSTSAMGTMVTTPG SGFGSGAGSGGSGSGALTEKRGRGRPPGSGKMQQLASLGKWFLGSVGTGFTPHVIIIS PGEDVAARIMSFSQQGPRAVCIISATGAVSTATLHQDSNSGGVVTYEGRFEILCLSGS YLVIEEGGSRTRSGGLCIALCGPDHRVIGGSVGGVLTAAGTVQVIVGSFMYGGTKKNK AKAEQETENNEEPIGGEEETPTMALPDHNMPHHTMGGWSAGLMRQMDSRTPNIDINSI RE</aaseq>

Gene Sequence

<dnaseqindica>3566..3793#3158..3319#2586..2717#1843..1910#645..1239#ctctctctctctccctcctctcctctcttctcttctcttctcttgggctcctctctcctgtgatccccctccgctagggttttagctatctcccatttcccccatccatcgccatttcgattggatcactcctctcccccctccaccgcctctcggatcccgccgccgcccgccgtcgccgcctccgccgccgcagactctatctctctgtgtatccatcccttctcgacctcgcgcaaatcccatccttttcgccccttctttccctgcgaaagatcgggtttttttttctgcccgtctctttctcgcgtttggttccaatcttttgctgcctggagatttcaccgccttgttcagagtcgagatctcccgtcgctgctcgatctgatctcgcctcgtttctcgaggagagaaaaaaaacaaaacaaacaaactgcggtttttgtgttcgggagtcggtggagaagagatctctctccgagattgatattcttgcgtccatttgcttcgcctccgatagctttcggaggaatctaatctcgaatagtgaaggaaagttgccaccttggttgtgcttgtggttgtgggtggccgcgtgagttcctcctccttcctcctctgtggcgcagcttcccattccatgaatggatgggagggagtccacagtggcgtcaggctccaacttctcctccttctatgtgcagcaccggggcattggcgtgccgggaggctccgggcacccggccgggctccacggcccgccgcccggtggatatcggcagcatcttgatgcagtctctgcggggtaccctttccagccccctcacattgggggttcccacattgggcagggttaccaccatgttgatgcctcagcccctgtcgcgcagcacggcagtggtggcggtggtggtggtatggacattggcatgggtgtcgaaatgagcgcggatgctaaaggggatcaggggagtggtgctggccaggatgagccggtgaagaagaagcgggggaggccgaggaagtataagcctgatggggcggtcacgctggggctctcgccgtcttcgtcgacgcctcactcgtcgacctcggcgatgggtacaatggtgaccacaccaggctcagggtttgggtcgggggcaggatcggggggttcggggtctggtgcccttacagagaagcgtggccgagggcggccacctgggtctggaaagatgcagcagttggcttctcttggtgagatcctgcaacctagcaaatttcatgatcatgttgtatgtttatatggtaatgattgatcgaatgcaagggtagtttaatatggtaacagaaatgcactaagaaactagtggtagatgatttccgattgttgaatgaattttgtcaacttcttgattccatgctaccttacattttgcacgatagtattgcttgttagatctgcaaacattctgaccacctttttatgttacgtatttccttgcttatatcatgaacttaagcttagatatgctattgggtatctggatcagatgtgaaaatggtatcctgtccagcttagttggttgttttttacctactattgtctttggaggccacggctgttatcatgcaaacacaatgcccgctcattatggtgttgttgggaacttggtggggtatgtgtactgataatactagtatatgtactcctaaaatctgatttactacttgaatcaacatcagaaacttctattgactatgcatggctagcttttgttcctcttcttttcttttatgcgtgaaatgggtttttttgtgttcctgctatctaataaaatgctgtaatgtgttcttcaggaaaatggtttcttggttctgttggaacaggttttactcctcatgtgattattatttcaccaggagaggtaagttaagttatacaaaggatactaatagctaagaatcatgctgttgtaacctttgttgaactttctgttattattcaacgcaacgattttctgattatgtgagtcgtgatagcttgaatgtagtacctcaaattgtcgtcaaaactattttttggattgcgagtgcaacacatttccaataatttcagttgtaataactaatactgatgacgttgttgaataaatgatgcttcattaacctgctacatgtaccaaactcttgtctattgattaaaaaaatcacttcactatcattggcatgtagtggcttcccccatcagtatacaactggtagttgggatatacagttaagtatcatttggtagtctcaggctgcactagcatctgtgtgttgtgcaaacctacaaaggtgtactttttagctgttgatgattcatcttttggagtcagtggtcttaactcatagtagtcctatgcaagaactacaattctttgcctgataactgatggatgccaactaattaacatgagttctaaaaaaaaaaactaattaagatccaaaactacagtggatctgatcttttttgttagtctctggaaatgaaaaacagtttttcatgttgttatatatgccttgttgttctgtgagtatagctttcctatcccatgcaggatgttgctgccaggataatgtccttctcacaacagggcccaagggcagtgtgcatcatctcagcgacaggagctgtatccacagcaacccttcatcaggattcaaactctggtggtgtggttacatatgaggtacgctgcttgtaggcctgtttgattcttagtattattgtagccgggacttccatattcatgcttttgtcctcatgtttcactcttgggtatagcaaaagatcctttatcctgcttttgactcagaatggtaaactaaacctcttatccctctttttgacccatacttattgcatgtgctgagctgcattagaaatggtaatcaacttgtctccattcattttggattttccatagttcctcaattgagtaaaaggctttgatgctgcttttagatgaacttttgctccatagttatctttgtagagaacttcttttagcagtcaaagattgccatatccatggtcaaacttgcaatgtaggtcatagtttacaatgtaggtcttgttgtgcctagcttaattctttataggcccttatgtttaccattggtttggcagggtcgatttgaaatcctgtgcctgtctggatcatatttggtgatagaggaaggtggttcgcgaacccggagtggaggcctctgcatagctctgtgtggccctgaccacagggttattggtgggagtgtaggtggagtcctgacagcagctggaactgttcaggtagtcatgtttgtatatgctatgttatccaaccaatctcggtcttttggtgtcatatggtttggctgttatctgaactgaataaaaggggtacatggcagcttatcttgtctgttaccctgtatcagcttttttgcccatcaaagtaaccaaccagttatgagtaggttatgcactgttttctgtgtatatctgtttggtttggttcttacgcattttgttttatattttttttggttgaaataggtgatagtggggagcttcatgtatggtgggacaaagaaaaataaagcgaaagctgagcaagagacggagaataacgaagagccaattggcggtgaggaggagacccccacaatggcactgccagatcacaacatgccgcatcatacgatgggtggatggtcggctgggttgatgaggcagatggactcaagaactccaaacatcgacatcaactctattcgcgagtaatgtgtattattgctggaaggaaggagcaccacctatatatctatctctgactgacggaattccccgaatccccgtgagtgcgcttggtagcatgcaatgcaacgcgatgcgctaacttgctgtaggtgtaagaggaagagagttgtttgagaaatgatgttgctggatgctgaggtatatgtcagtgctatgttaggaactcctctacatactaagtattagaatatgaatgttatggtggtgtactgtgaatctgctgcatctgcatctgcggtgttgtatgagaatgaaggatccggatcgtaccctattatattatatagaggaagaaaaaagaacctggggattt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0824300, RefSeq:Os02g0824300