Difference between revisions of "Os02g0827900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0827900| Description = Similar to Signal peptidase 18 subunit (Fragment)| Version = NM_001055131.1 GI:115449970 GeneID:4331226| Length = 57...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0827900|
 
GeneName = Os02g0827900|

Revision as of 19:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0827900

Description

Similar to Signal peptidase 18 subunit (Fragment)

Version

NM_001055131.1 GI:115449970 GeneID:4331226

Length

5760 bp

Definition

Oryza sativa Japonica Group Os02g0827900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36459259..36465018

Sequence Coding Region

36460064..36460189,36463529..36463586,36463693..36463780,36463959..36464004,36464111..36464146
,36464313..36464381,36464521..36464633,36464871..36464910

Expression

GEO Profiles:Os02g0827900

Genome Context

<gbrowseImage1> name=NC_008395:36459259..36465018 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36459259..36465018 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagattcgccacgccctcgtccacctcattaccctggggatggttatcagctcggcattgatgatatggaagggattgattatcatgacagggagtgagtcgccactagttgtggttctatctgaaagcatggagcttggatttgaaaggggggatatcctgtttttgcaaatgagcaaacaccctatacgaacaggagatatagttgttttcaatgatggccgtgaaattccaatcgtccatcgcgttattgaggttcacgaacgacgggataatgcacaagttgatttcctcacaaaaggtgacaacaatcctatggacgaccgaattctttacacacatgggcagctttggcttcagcaacatcacatcatgggacgggccatagggtatctacccaaagctgggtgggtgacattggtgatgactgagaaaccagttattaagacaaatcaagctgcaaatttgcaggtgatggggtgcttcaattccaaaccaaacaatgccggtgcgatcagaagaagacatgggagggtagaagtggatgtttgcgcctggattatgagttcctga</cdnaseq>

Protein Sequence

<aaseq>MQIRHALVHLITLGMVISSALMIWKGLIIMTGSESPLVVVLSES MELGFERGDILFLQMSKHPIRTGDIVVFNDGREIPIVHRVIEVHERRDNAQVDFLTKG DNNPMDDRILYTHGQLWLQQHHIMGRAIGYLPKAGWVTLVMTEKPVIKTNQAANLQVM GCFNSKPNNAGAIRRRHGRVEVDVCAWIMSS</aaseq>

Gene Sequence

<dnaseqindica>4830..4955#1433..1490#1239..1326#1015..1060#873..908#638..706#386..498#109..148#gtagtagctgcttctcctcccgatcgagcagaggcagtagtagcttagctagcagatatatactgtagcgatggagtaatatgatcgtcgatcgagccgatccgcgcgatgcagattcgccacgccctcgtccacctcattaccctgggtaacaatcgatcctttttttcttttcttttttgcataatattacgcctttttgcgcttcgattaaattgctagtgcctgtagaccttgtcccttcatatgcctgactgactgactccaaacaggcgtgaattcaatggataaagacagtgaattttgattagaattagtgtgtttgtatatgctgctcgttctccctccccgtttagttaatctgtttgttgtttggcactgacagggatggttatcagctcggcattgatgatatggaagggattgattatcatgacagggagtgagtcgccactagttgtggttctatctgaaagcatggagcttggatttgaaagggtctgtttattttccttcctccatcccatggcatgaattcactactaatcactctaccattttcttcaaactgttgtcatctatatgtcctagcttgtgattcacctgatcaatgttagtgtgtttgcttgcctggcagggggatatcctgtttttgcaaatgagcaaacaccctatacgaacaggagatatagttgttttcaatgatgtaagtccctactgaattgtcactggtttatcgatcaccataaaaatattttctgaatcatcaacaaagcagccctttctccaaccttgttttaatgatgctaatacacgtgcatcatttgcaaggcactaattaacttattgcgatttgcctctttgatttgtagggccgtgaaattccaatcgtccatcgcgttattgaggtcgttaagctttgtaatatccacaccaatcagtctccccttacatttgatctcaggtattatgtctgaaaattttccttgttaattatattatatctccttgtaggttcacgaacgacgggataatgcacaagttgatttcctcacaaaaggtatacttacacttattactattttctatcagtggttttgacctcctaattttgttccttgcatattaattaagtaatctgaatcatatatatctgttggctcaagtgatgagcatgaattaatttgtactgtgaatagcgctgcgttatactgatcgatgaactgtctcattatcaggtgacaacaatcctatggacgaccgaattctttacacacatgggcagctttggcttcagcaacatcacatcatgggacgggccatagggtaaaaatactttcaccttggcttaattgtctactggagtagtacttgtgaatttgtgttttggtgatgggctgattaatatactgttcttctgtaatgttaacaggtatctacccaaagctgggtgggtgacattggtgatgactgagaaaccagttattaaggtatgcacatttacccttattatattactggtctatatagctataagcatatactagtgttgcaagagtcctactgtgagctttgcatcggtgcaaagaagttaattagttcgtgttttgtctgaaatgtgttgtttacctgctgatcgatgcgctggggctgctgctcatcacatcaagctagtacaacaaattggtcggaacatgtttctaacactcagggaattggaggaaagcattggtttttggaaggctaaaaaaaccagcagcatacttgtgtttagaggagtattaattagctactcctacagtattgtaatgtcgagggattttgcatattcttccgcccggacggttgggttcagaatgctatccaaaacttgtttaacaatgcgggatgcatacggaacctcacttagcttttacaactttctcgtttatcataaattcgcttaccaaactattaaatattctgtaaatatttttatattaaaaaaatttaaaataaacttatttttcaagtttatagctagtacactaatcatgttttttttttcattttgtgtacggcaaaaagcaaagcttccgagcatagactaaggccttgtttgtttcaatttaacattactgtaatccagattattgtaatctttaacgacttgggaaaaaaaattcaacaacaactttgaaataaaatttcccttgcaatctggaccgttcagtctgtggatcagacggcaaggcagatacactcgtcgtcatcggctgctactagtagtagcaccttgagtaagaggtgattcccgctgatggcgccgcctcccgccggcgtggaggccgtctgcgccgccgtcatcaaatccacgctaacccaaccccacaaccaccaccacctgctcgcggcctcgccctccctcctcgccgccgtcctccaccgcctctccccgctcccctccaccgcgctcgccttcttccgctccctgcctccgccccacccgctcgacgcctccctcgccctcctccgcctcctcgccccccacccgcgccaccaccccaccgcccgctccctcctccgcgacctctccctccgccacccgctctcctccccgctcctcctcccttccctcctcgccgacccccacctccccagctggctcctcctcctcctctcccagtccgcccgcccgcacgacgccctccgcgtcttcgaccacatgcgcgcgcgcgaggtcgtccccgacgcgcatgcctcctccgcgctcctcaccgcgctcgcgaagtcccggatgacggccaccgcgcgcaaggtgttcgaccaaatgacgcgggccggggttgccatgaacacccacgtgtacaacgccatgctgcacgtctgcttgaaggccggggacgccgcgctcgctgagtctctgatgacgcggatggacgccgccggtgtgccgctcgataggttctccttcaacaccgtcatcgcgctctactgcaggaagggcatgcagtacgaggccatgtgcgtacgggagcggatggagaatcagggtgtcaaggctgacgtcgtcacatggaactcattgatccatggcttgtgtaaggagcgcagggtgaaggaggcgagtcagctgctgagagagatggcgatggcaggggtggcaccggaccatgtcacatacaccacgcttgttgatgggtactgtcgagcaggcgacttggaggaggcggtcaagctgcgaggggagatggaggcaatggggatgctaccaggtgtcgcgacatacaatgcgattctcaggaagctctgtgaagatggcaagatgaaggaggtcaatgtgttacttaatgagatggatgagaggaaggtgcaggctgatcatgtaacgtgcaacacgctgatcaacgcatactgcaagagaggggacatgacctcagcgctcaaggtgaaaagaaggatgatggagtcagggctacagttggatcagttcacttacaaggctctcgtccatggtttctgtaaggccaaggagctggatgaagccaaggaagccttgtttgagatgatgggtgcaggtactacaaatctaactaaaatttatggctctgattggtagcgatagtacatcatcaagacttaataatgcatattgagagatcctttttgttataatagaaaagcatgcagcatctttgactctgttttatcagttatcaatccatatcagtattttctaatgatgtttggtatatcttgtgttttttccccttgtacgcaggattttcacccaattatagtgtgttgtcatggattgtcgatggtttatgcaacaagaataatgcagttgcagttctagccattcctgatgaacttatgaaaagaggatttccaccagataaagcagtatataggtctctgatccgaaggctatgcaagaaagggtttattgatcttgctgggaatgtgttcaatgaaatgcaaggcaaaggtctagaagctgactgtcttgtgtatgctacacttgcgtgtgcatatctgactgctgggaagccagttgctgctttggatatcttgaatgagatggcgaagaagcagttgtacataacaccccagatttacaactgtatgtgtacctcttatgctgatgagaagggatcgcttaatatgctctgggttcatgccattgagagaggcctaatcacaaagagcgtatacaaagtgatgcaccaagcaagaatgaaatcttcaaatcctgcagtctagaatgcgaggaggggaatgctcatatttcagggatgaacttttcagagactgtgaattgagagtgggctatagaaatagtcttgcactttggtcttttgatgtcgatgatgctcgtgagtcacttaattggttccctctgttggctggcacttaatttactaaatcatagcaattagttagcacaagcagtttctttcttgtaccttccacatgtccctttgcatcattgatttctgctgtctgcaagaggtggcaccttgtgttctctggcttggtaaattcccatctctattccctttcatcctgcccggaacagagtggaggcgtgatgtttgtgatatgtaggtagggcagattgctagtgcttacatttcaatggcctgcctgccatttcttttagttttattggaaggaactctatctttctttatcaccttaattatcaatgcttgcattgcatgtacgcctgtatacatattagttcagttttctatgtctgattgattcttcagcccaccaatcattcaggtttttgtccaatgctattctgctttaaattgatgtttctttttctgaattcacagacaaatcaagctgcaaatttgcaggtgatggggtgcttcaattccaaaccaaacaatgccggtgcgatcagaagaagacatgggagggtagaagtggatgtttgcgcctggattatgagttcctgaggctcagaggagctgcgtcgaggacttggataattttcatggctactcgctactcatgagcactactcctgactaggcccaggaggcgcacgatcactcttcatggttcattcatggcacatctgctaaattgattatcaagaagaataatggcagaggtgatgaactaactgtctgaattcagtgttttttttttcgccgggaaggctgaaggagaccatccgagtatattaagaaggagtaaaagttacaagaaaaacaccacaactgaattcagtgcttgctggactgctgatcttctgcaggctttggaggattatttgcctctgctcttctcagcctagtcaaagatgataacctgatttccccttctttttaattggtctgaatgaaatccaggagatttgtgtcagtcgaggttgaattcttttacagggagcgagttggaagatagtacaattttgcatttatgaacgaagaggatgatgcagaggtccgcgtgcacctatattgttgcatgtggtgtaggacaataggagtgatactgtactgtgtttgatcatctatttgtcttgtgtaccgtcaatgcccagtgcttagaatgagatgctacctgttgtcttggacacgtgacggctatgctgcattcgtccgaagcaatttttgtgcgtcttcctaagacatgtattgagggataccatgctaatataaggtatctgagggtctggagcaatatgtaagcatatgagatacagataattagactctgaaactttgtgtttgtattccatgataagtttgctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0827900, RefSeq:Os02g0827900