Difference between revisions of "Os02g0830100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os02g0830100| Description = Similar to Oligopeptidase A| Version = NM_001055147.1 GI:115450021 GeneID:4331244| Length = 4961 bp| Definition = O...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0830100|
 
GeneName = Os02g0830100|

Revision as of 19:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0830100

Description

Similar to Oligopeptidase A

Version

NM_001055147.1 GI:115450021 GeneID:4331244

Length

4961 bp

Definition

Oryza sativa Japonica Group Os02g0830100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36570373..36575333

Sequence Coding Region

36570552..36570635,36570773..36570844,36571043..36571108,36571194..36571225,36571309..36571468
,36571622..36571739,36571821..36571966,36572195..36572440,36572520..36572627
,36572804..36572925,36573098..36573188,36573271..36573501,36573580..36573723
,36574243..36574319,36574526..36574649,36574736..36574903,36574993..36575316

Expression

GEO Profiles:Os02g0830100

Genome Context

<gbrowseImage1> name=NC_008395:36570373..36575333 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36570373..36575333 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgtttctcatcgtctcggcttcctccttcctcatccgtctcccacttgtcgctcgagctcgcctcccaaaccctacctcctcctcatatacctctaggtctaggtctagggccctcctcctcctccccgcctcctcccctcttcgcgccttctgccccgcctcccgccgcccctcgcccgccacctgctccgccgcctacgcctcctcctccatggccaccgacgacaacccgctcctcgccgacttcgacttcccgcccttcgaccgcgtcgagcccatccacgtccgccccgccgtccgcacgctcctcgcccgcctcgagggcgagctcaccgacctcgagaagggcgtgcagcccacctgggggaagctggtcgagccgctcgagcggatcgtcgacagcctcgaggtcgtctggggcaccgtcgaccacctcaaggccgtcaaggactcttccgacctccgcgccgccgtcgaggacgttcagcctgacaaagtcaaattccaactaaggctgggccagagcaagcctatataccaagctttcaacgccataaggaattcttcagactgggaaaccctcagtgaggctcgcaagcgtatagtagaagcccaaatcaaggaagccgttctaagtggagtcgcacttgaggatgaacagagggagaaatttaatcaaatcgagcaggagcttgagaagttaacacaaaagttcagtgaaaatgtgctggatgcaactaagaaatttgagaaattaattactgataagaatgaaattgatgggttacctgccacagcacttggcttagcagcacagactgccgcgtcaaagggtcatgaaaatgcttcggctgaaaacggaccatggatcatcacattggatgcgccaagctatattgctgttatgcagcatgcacggaacagagcacttcgtgaagaagtttatcgtgcttacctaacccgtgcctctagtggcgaccttgataacaccaatatcatcagtcaaattctaaagttgaggctggagaaggctaagctactcggctacaagaactatgctgaggtaagcatggctcagaaaatggcaactgttgaccgtgtagaagagcttcttgagaaactccgtgctgcctcctgggatcatgctgttaaagatatggaagatctaaaagcctttgctaaagagtctgcttctccagaagccaatgacctggctcactgggacctaagcttctggagtgaacgactccgggaatctaaatatgatatcaacgaggaagatttgcgtccttactttgcactacccaaggttatggatggcctcttcagtctcgcaaataggctctttggtgttagcgtagagcctgcagatggactggctcctgtttggaatagtgatgtcaaattttactgtgtcaaagattcttcgaatagccctgttgcttatttctacttcgatccatattcaagaccatctgagaagcgtggaggggcttggatgaatgtggttttttctcgcagtcgtgtgcttgctcgcaatggttcacctgtcaggcttcctgttgcccatatggtgtgtaatcagaccccaccagttggtgataaacccagtcttatgaccttccgtgaggttgaaactgtgttccatgaatttggtcatgcgctgcagcacatgcttaccaaacaagatgaaggatttgtttctggtattcgtggagtagaatgggatgctgtagagctgccctctcagttcatggagaactggtgctaccacaagaatactcttttgagcattgcaaagcattatgaaacaggcgaacttcttccagaggaaatttatgcaaagcttgtcgctgcaaagaatttccgtgctggcaccttcagtttacgtcagatacgttttgctagtgtggacatggagctgcatacgacttacgatccaaatggttcattgtccatatatgatgtcgaccgaagagttgctgagcgaacacaggttcttgctcctcttccggaggataaattcctgtgcagctttagccatatatttgcaggaggctatgcagctggatactacagttacaagtgggctgaagtattgtcagctgatgcattctcagcatttgaagacgttggtttggacaatgagaaggcaattgaggaaactggcagacgattcagagaaacagtccttgcgcttggaggtggaaaatctccactcgaggtgtttgtgtctttccgcggacgggagccatcaccggaagctctgctcaggcacaacggcttgctacctgttgctgcattgtga</cdnaseq>

Protein Sequence

<aaseq>MVFLIVSASSFLIRLPLVARARLPNPTSSSYTSRSRSRALLLLP ASSPLRAFCPASRRPSPATCSAAYASSSMATDDNPLLADFDFPPFDRVEPIHVRPAVR TLLARLEGELTDLEKGVQPTWGKLVEPLERIVDSLEVVWGTVDHLKAVKDSSDLRAAV EDVQPDKVKFQLRLGQSKPIYQAFNAIRNSSDWETLSEARKRIVEAQIKEAVLSGVAL EDEQREKFNQIEQELEKLTQKFSENVLDATKKFEKLITDKNEIDGLPATALGLAAQTA ASKGHENASAENGPWIITLDAPSYIAVMQHARNRALREEVYRAYLTRASSGDLDNTNI ISQILKLRLEKAKLLGYKNYAEVSMAQKMATVDRVEELLEKLRAASWDHAVKDMEDLK AFAKESASPEANDLAHWDLSFWSERLRESKYDINEEDLRPYFALPKVMDGLFSLANRL FGVSVEPADGLAPVWNSDVKFYCVKDSSNSPVAYFYFDPYSRPSEKRGGAWMNVVFSR SRVLARNGSPVRLPVAHMVCNQTPPVGDKPSLMTFREVETVFHEFGHALQHMLTKQDE GFVSGIRGVEWDAVELPSQFMENWCYHKNTLLSIAKHYETGELLPEEIYAKLVAAKNF RAGTFSLRQIRFASVDMELHTTYDPNGSLSIYDVDRRVAERTQVLAPLPEDKFLCSFS HIFAGGYAAGYYSYKWAEVLSADAFSAFEDVGLDNEKAIEETGRRFRETVLALGGGKS PLEVFVSFRGREPSPEALLRHNGLLPVAAL</aaseq>

Gene Sequence

<dnaseqindica>4699..4782#4490..4561#4226..4291#4109..4140#3866..4025#3595..3712#3368..3513#2894..3139#2707..2814#2409..2530#2146..2236#1833..2063#1611..1754#1015..1091#685..808#431..598#18..341#gcggaatcggcgtcgccatggtgtttctcatcgtctcggcttcctccttcctcatccgtctcccacttgtcgctcgagctcgcctcccaaaccctacctcctcctcatatacctctaggtctaggtctagggccctcctcctcctccccgcctcctcccctcttcgcgccttctgccccgcctcccgccgcccctcgcccgccacctgctccgccgcctacgcctcctcctccatggccaccgacgacaacccgctcctcgccgacttcgacttcccgcccttcgaccgcgtcgagcccatccacgtccgccccgccgtccgcacgctcctcgcccgcctcgtacgtcccctgccctgccctggatccaccagcttccttcccgcaaatttaatttccgatctgacccgacccttccttgttgcatgcaggagggcgagctcaccgacctcgagaagggcgtgcagcccacctgggggaagctggtcgagccgctcgagcggatcgtcgacagcctcgaggtcgtctggggcaccgtcgaccacctcaaggccgtcaaggactcttccgacctccgcgccgccgtcgaggacgttcaggtacctacccacaacagctgcgcttgactcatcatcctcacttcactgatcgtcatcaactcaactgtttgacccttgctgcacagcctgacaaagtcaaattccaactaaggctgggccagagcaagcctatataccaagctttcaacgccataaggaattcttcagactgggaaaccctcagtgaggctcgcaagcgtatagtagaaggtgaccttctatgttatattcaatccacactcaaaccatgtttatctcccttgtcgtcatagtctaatgctgttaacattcatcgttatatattatacttccaaacattaccaagtcaacttccaacttgaccacatttctttatggcagacgagtacttgcattttcctttcctaacaacattccccttttttccccttcaccagcccaaatcaaggaagccgttctaagtggagtcgcacttgaggatgaacagagggagaaatttaatcaaatcgagcaggtaatcttttttttccatcaaatattggacacttttatttcggtgaaaatcttatttcaagcagtctagcaacataaaaaatttcttcattgtagatagttggacataggctctgacatgatctttttcaccagtcatgctcttaaagcatactatatactatgctgcactgttcaagttttgattaaacgcattacattatactgattattacaaacaatgccagaatttacttgattgtttcgtcctgacaaatctgcatgcttttggtcaacaaacctaggattacttgacattgactcatataaaccttagcttcttctcttctgtgatgtcacattctttttggggtggctgttgtttgttgtagctgattgtagatgctatttaatacttctgatggttgtcatattccatatattctcttcatgttacttttttgttcatgcttatttattttctttatttttggatgtttgctgatgcatattaattaatggaatgctaacttcatttcaggagcttgagaagttaacacaaaagttcagtgaaaatgtgctggatgcaactaagaaatttgagaaattaattactgataagaatgaaattgatgggttacctgccacagcacttggcttagcagcacagactgccgcgtcaaaggtatataagctataaacaccattattgaagcttaaaagttctctcttgattcatcacactgacaagccattttgttagggtcatgaaaatgcttcggctgaaaacggaccatggatcatcacattggatgcgccaagctatattgctgttatgcagcatgcacggaacagagcacttcgtgaagaagtttatcgtgcttacctaacccgtgcctctagtggcgaccttgataacaccaatatcatcagtcaaattctaaagttgaggctggagaaggctaagctactcggctacaagaactatgctgaggtgcttgcatttgtcactgtttccacattaaaatcatgtatacaattatctaacttttctaaactagttttaaatcctgaaggtaagcatggctcagaaaatggcaactgttgaccgtgtagaagagcttcttgagaaactccgtgctgcctcctgggatcatgctgttaaaggtagccaatcaaattattgagtatcttctttgtatttctcttgtgttatttatgtatcatctttgttttcatacatacctgtcttagtgtgagcaaatttttgtggcatattctataaggagtaggcatcttttgaggttcgaatatcttagctgttggtttctgtgtgcagatatggaagatctaaaagcctttgctaaagagtctgcttctccagaagccaatgacctggctcactgggacctaagcttctggagtgaacgactccgggaatctaaatatgatatcaacgaggttctttctttgctctctagaaatgtttaatggatttcttatgatcagtactgttttgatggctaaactgtgatgggttactgttttgtccatatatacgttgagctgaactctattaaatgtgctcctgttgtgatgatgggccattgagttgatttctagcattgctactgcaggaagatttgcgtccttactttgcactacccaaggttatggatggcctcttcagtctcgcaaataggctctttggtgttagcgtagagcctgcagatggactggctcctgtaagcagttgttttcttttcttcagcaaactatatgttaatgttctgcagctattgaccactgagttacctttttcaggtttggaatagtgatgtcaaattttactgtgtcaaagattcttcgaatagccctgttgcttatttctacttcgatccatattcaagaccatctgagaagcgtggaggggcttggatgaatgtggttttttctcgcagtcgtgtgcttgctcgcaatggttcacctgtcaggcttcctgttgcccatatggtgtgtaatcagaccccaccagttggtgataaacccagtcttatgaccttccgtgaggtaagcaataataaatatggcaatggtaaattattccagatagtctccaatgtatgagtattctgttacatcaatatgtggaaaactgtacactaaagtactgatgagagcatcagtaattatcaaattcacctgaagattgtgacacacctgcttccatatcaattaagtagtgctatactgattatgagggtaatttcttttttttttggcatgtgtcttttgtaggttgaaactgtgttccatgaatttggtcatgcgctgcagcacatgcttaccaaacaagatgaaggatttgtttctggtattcgtggagtagaatgggatgctgtagagctgccctctcagttcatggagaactggtgctaccacaagtaagatggatctgtatcattttgtttttttaacttgtagccttgaacctgtttgttaaacagttgttttgttggtgccaggaatactcttttgagcattgcaaagcattatgaaacaggcgaacttcttccagaggaaatttatgcaaagcttgtcgctgcaaagaatttccgtgctggcaccttcagtttacgtcaggtatgttttatattttatttttgtctgtattgtgtataggtcatggtcacatacacacatcacactaatatctaacaagtgtatgaagtaatttatgcttcctttatgcctatgttctttctaaatggctaatccttgccatcccttctgcagatacgttttgctagtgtggacatggagctgcatacgacttacgatccaaatggttcattgtccatatatgatgtcgaccgaagagttgctgagcgaacacaggttcttgctcctcttccggaggataaattcctgtgcagctttagccatatatttgcaggtttgcaatgctttaacctacatgtacattcattcatttatttgactgcagatctcactattttttttattgacaatctgcaggaggctatgcagctggatactacagttacaaggtatattgctgtaaacgtttaaaacattacgttccttctgtggcatatgagtatgctgaaactagtatcttttctatgtgcacagtgggctgaagtattgtcagctgatgcattctcagcatttgaagacgttggtttggacaatgagaaggtacagtttttcttgttttcccccatccagggaggtgctctggatgtgtcaaaatgacttgtttagtagtcattttcttaacttaatttgtttatttggccaaacgtatattttgccctacaaaacaatgtgtggcacatagaatacagaaaggatataaaaatcaatgatattgactctagctatgactttatctaggcaattgaggaaactggcagacgattcagagaaacagtccttgcgcttggaggtggaaaatctccactcgaggtaggcttctggtgcctttgacagcatctcttgacatggatgctttatttgtgcaataagcgtatgtaaagggcatagtttgcactaacttatgtggaataagacgacgtacgctaactctggaaatgaaaatgcaggtgtttgtgtctttccgcggacgggagccatcaccggaagctctgctcaggcacaacggcttgctacctgttgctgcattgtgataactcatgctcgattgtccccttcttttttcttttaacttgcgaaaacggcttgtaagatgttattgattgatggcatatcagcaacacgctaaaagtgccgtgtcctgcttacaacatgaaaaacaagttgctgtgcacaaccattatataatgatcatcgctgcttcttgccgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0830100, RefSeq:Os02g0830100