Difference between revisions of "Os02g0832400"

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(Created page with "{{JaponicaGene| GeneName = Os02g0832400| Description = Similar to Callose synthase 1 catalytic subunit| Version = NM_001055162.1 GI:115450051 GeneID:4331259| Length = 6477...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os02g0832400|
 
GeneName = Os02g0832400|

Revision as of 19:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0832400

Description

Similar to Callose synthase 1 catalytic subunit

Version

NM_001055162.1 GI:115450051 GeneID:4331259

Length

6477 bp

Definition

Oryza sativa Japonica Group Os02g0832400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:36677023..36683499

Sequence Coding Region

36677208..36677683,36677803..36677896,36677979..36678089,36678177..36678293,36678393..36678485
,36678585..36678676,36678766..36678892,36679370..36679507,36679585..36679688
,36679805..36679898,36680107..36680229,36680326..36680440,36681461..36681795
,36681881..36681933,36682012..36682072,36682804..36682885,36682962..36683011
,36683096..36683182,36683405..36683499

Expression

GEO Profiles:Os02g0832400

Genome Context

<gbrowseImage1> name=NC_008395:36677023..36683499 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:36677023..36683499 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtcgtcgtcgtcggggcgtcgggttggggggcctaggggcggcggggagagtagtcctagtccggcggcgggggcgggggcggcggcgtcggggggtcgacggatcctacggacgcagacggcggggaacctgggggagtcgatattcgacagcgaggtggtgccgtcgtcgctggtggagatagcgccgatcctgcgtgtggcgaacgaggtggaggggagcaacccgcgggtggcgtacctgtgcaggttctacgcgttcgagaaggcgcaccggctggacccgacgtccagcggccgtggcgtccggcagttcaagaccgcgctcctgcagaggctggagagggagaacgaccccacgctcaaggggagggtcaagcagagcgacgcccgcgagatgcagagcttctaccagcactactacaagaagtacatccaggctcttcagaacgctgccgacaaagccgaccgtgctcaactcactaaagcttaccaaactgctgccgtcctgtttgaggtcctcaaagccgtcaatgtctcccagaaaattgaagttgatcaagcgattttggagacacacaaccaagtcgaggaaaagaaaaaactttatctcccttacaacatcctcccgcttgaccctgacagcgctaatcaggctatcatgcgatatcctgagattcaagctgcttttcacgctcttcgtaatacaagaggactaccgtggcccaaggatcatgaaaaaaagcctgatgctgatcttcttggttggcttcaggcgatgtttggatttcagaaagataacgtgtccaaccaaagggaacacctcatactcttacttgccaacgtccatataaggcagattcccaagcccgaccaacaacccaagttggatgaccgagcactggacacagtcatgaagaagctatttaagaactacaagagatggtgcaagtaccttggccgcaaaagcagcttatggttgccaactattcaacaagaagtgcagcagcgtaagctcctctatatgggtctttatcttctcatctggggtgaggcggctaacctgagatttatgccggaatgtctatgctacatctatcatcacatggcttttgaactatacggtatgttggctggaaatgtgagtccaacgacaggtgaaaatgttaaaccggcttacggtggtgatgaagaagcctttttgaagaaagttgtgactccaatatacaaagtcatcgagaaggaagctgaaaggagtgaaagtagtgaaaggagcgaaaggagcaagacaacaaaatctaagcactcacattggagaaattatgatgatctaaatgagtacttttggtcaagagattgtttcagattaggatggcctatgagagctgatgcagatttttttaagaccccagattatgcttatcatgatgaagtgagcggagagaacagaagagttggtagtggccagtggatgggaaaagtaaattttgttgagataaggtcattttggcacatcttccgcagctttgacaggatgtggagcttcttaattttatctttacaggccatgattataattgcttggaatggtggtacaccaagtgatatctttgatgcaggagtatttaaacaggttttgagcatattcataactgctgcaatactgaaattgggtcaagcaattctggacatcatcctgagctggaaagcaagaagaagcatgtctcttgctggcaagctgcgctacatcttgaagttgatatcagctgctgcatgggttgtgattttaccagtaacttatgcatacacctgggagaatcctacaggtcttgcaagaacaattaaaagttggctcggtgatggtcagaatcaaccatcattatacatcttggctgttgtgatatatttagcaccaaacatgctgtcggctgtgttatttcttttcccagtccttagaagagctcttgagcgatcaaatcttaaagttgtaacattcatgatgtggtggtcgcagcctcgcttgtttgttggtagaggaatgcatgaaggagcattctcccttttcaagtacacaatgttctgggtccttctcttagcaacaaaattgatagtaagctactacgtggagatcaagccacttgtgcgaccaacaaaagatataatgaaggagccaatacggacgtttcaatggcatgagtttttcccacacggaaataacaatattggtattgtaattgcactttgggctcctatcattcttgtatatttcatggatacccagatttggtatgcaattttctcaacattaattggtggtatatatggggcatgtcgccgtcttggtgagatacgcactttaggaatgttaagatctcgcttcgagtctttgcctaaggctttcaatcaacgcttgattccatctgattcaaataagaggagagg</cdnaseq>

Protein Sequence

<aaseq>MASSSSGRRVGGPRGGGESSPSPAAGAGAAASGGRRILRTQTAG NLGESIFDSEVVPSSLVEIAPILRVANEVEGSNPRVAYLCRFYAFEKAHRLDPTSSGR GVRQFKTALLQRLERENDPTLKGRVKQSDAREMQSFYQHYYKKYIQALQNAADKADRA QLTKAYQTAAVLFEVLKAVNVSQKIEVDQAILETHNQVEEKKKLYLPYNILPLDPDSA NQAIMRYPEIQAAFHALRNTRGLPWPKDHEKKPDADLLGWLQAMFGFQKDNVSNQREH LILLLANVHIRQIPKPDQQPKLDDRALDTVMKKLFKNYKRWCKYLGRKSSLWLPTIQQ EVQQRKLLYMGLYLLIWGEAANLRFMPECLCYIYHHMAFELYGMLAGNVSPTTGENVK PAYGGDEEAFLKKVVTPIYKVIEKEAERSESSERSERSKTTKSKHSHWRNYDDLNEYF WSRDCFRLGWPMRADADFFKTPDYAYHDEVSGENRRVGSGQWMGKVNFVEIRSFWHIF RSFDRMWSFLILSLQAMIIIAWNGGTPSDIFDAGVFKQVLSIFITAAILKLGQAILDI ILSWKARRSMSLAGKLRYILKLISAAAWVVILPVTYAYTWENPTGLARTIKSWLGDGQ NQPSLYILAVVIYLAPNMLSAVLFLFPVLRRALERSNLKVVTFMMWWSQPRLFVGRGM HEGAFSLFKYTMFWVLLLATKLIVSYYVEIKPLVRPTKDIMKEPIRTFQWHEFFPHGN NNIGIVIALWAPIILVYFMDTQIWYAIFSTLIGGIYGACRRLGEIRTLGMLRSRFESL PKAFNQRLIPSDSNKRRG</aaseq>

Gene Sequence

<dnaseqindica>186..661#781..874#957..1067#1155..1271#1371..1463#1563..1654#1744..1870#2348..2485#2563..2666#2783..2876#3085..3207#3304..3418#4439..4773#4859..4911#4990..5050#5782..5863#5940..5989#6074..6160#6383..6477#gctttacagtagtaggagaaagctgcaggagctctccctcacactcctgatgtgatgagtggagagagtcccccactgctgctgctgctgctgcgcggggcaaccggccaccggctgcacctcctcgggtcggggatttccgggcttgaagcagcagcactaggaaggtaggtagggtagggtggatggcgtcgtcgtcgtcggggcgtcgggttggggggcctaggggcggcggggagagtagtcctagtccggcggcgggggcgggggcggcggcgtcggggggtcgacggatcctacggacgcagacggcggggaacctgggggagtcgatattcgacagcgaggtggtgccgtcgtcgctggtggagatagcgccgatcctgcgtgtggcgaacgaggtggaggggagcaacccgcgggtggcgtacctgtgcaggttctacgcgttcgagaaggcgcaccggctggacccgacgtccagcggccgtggcgtccggcagttcaagaccgcgctcctgcagaggctggagagggagaacgaccccacgctcaaggggagggtcaagcagagcgacgcccgcgagatgcagagcttctaccagcactactacaagaagtacatccaggctcttcagaacgctgccgacaaagccgaccggttcctctcctctttcttttactcctcctattttacagtactatatacgtctaattccttcacaattttattttttattaattcctaacactgacactagtaacaccccctcctctcagtgctcaactcactaaagcttaccaaactgctgccgtcctgtttgaggtcctcaaagccgtcaatgtctcccagaaaattgaagttgatcaagcggtaatcttcttaactataacttgattatgcatttcttcattttcttcttctactaacttgtaataaataacctctcttgcagattttggagacacacaaccaagtcgaggaaaagaaaaaactttatctcccttacaacatcctcccgcttgaccctgacagcgctaatcaggctatcatgcgatatcctgaggttcccattcttctcaaaccctacctatcttaatcttacgtatcttttccaactcattctgcattttttattctcctcattttacagattcaagctgcttttcacgctcttcgtaatacaagaggactaccgtggcccaaggatcatgaaaaaaagcctgatgctgatcttcttggttggcttcaggcgatgtttggatttcaggtaatcacaccgccctcaggctcacccactaacttaaccattattttccttctcttcacctatctgtcacttatttgcaattcaactatcactctgcagaaagataacgtgtccaaccaaagggaacacctcatactcttacttgccaacgtccatataaggcagattcccaagcccgaccaacaacccaaggtctcactcttactcaacgtccatatcggtgcttgtgtcattctggtggtgcttgtgtcattctggtgtttactcttttctttttcctcacattttcagttggatgaccgagcactggacacagtcatgaagaagctatttaagaactacaagagatggtgcaagtaccttggccgcaaaagcagcttatggtacgatatttaatctaaaaatacgaatatgcacaaggtctctcaagcttgcttgatgtatcactatcagatggtcatttcctttccaggttgccaactattcaacaagaagtgcagcagcgtaagctcctctatatgggtctttatcttctcatctggggtgaggcggctaacctgagatttatgccggaatgtctatgctacatctatcatcacgtatggctgatcccttccatttttccccttaaaattagtatatggtttttaccaagctagtaggcctggatcttaaagttgcgcaagcttcttacctgaatacccaatgatggtctggtcacaataaaattgacttatcggacctttttctttgtacaaagctatttccaatttgccatatttggtttctatctacaaagtagttagctggatcttaatggagtccaggctccaatgctgatgatgttcctggccataataacattgacttacctgacaatatatgagagttgcacacagctattgccatacacaaagaatcacattctgctcacgttgataatatgaggaagcatatcttggatggaattcatctttccccatcatgtcaattatgatgggatatttctgtatttgtaactcttgtgatgagattattttggtgagtgctgactgtgtaatattgttttctcatagatggcttttgaactatacggtatgttggctggaaatgtgagtccaacgacaggtgaaaatgttaaaccggcttacggtggtgatgaagaagcctttttgaagaaagttgtgactccaatatacaaagtcatcgagaaggtaccccccacccccccaaaaaaagtatatctctgtttccagctccatcaacttatacactcaagccttttacataggaagctgaaaggagtgaaagtagtgaaaggagcgaaaggagcaagacaacaaaatctaagcactcacattggagaaattatgatgatctaaatgagtacttttggtaagcactagcctaatttattctgagctacttttatgagttttagtttgttgtttcaaatttatgagctacttttctaaggaaacctgtgtgattatttctgcatttattctcaggtcaagagattgtttcagattaggatggcctatgagagctgatgcagatttttttaagaccccagattatgcttatcatgatgaagtgagcggagtaagtcccttatgatacatacctacctatattactttcatgaagaaccttcagcttagtaatacttctgttagtattccattcatgaatcacataggtggtaaaacaggtctatattattttttataacaaaccaaaacaattttgtagtatacgtcttcatagggtattcttggcactgattttttttaaaaaacttgtggtccaggagaacagaagagttggtagtggccagtggatgggaaaagtaaattttgttgagataaggtcattttggcacatcttccgcagctttgacaggatgtggagcttcttaattttatctttacaggttaattgccaatccatgccttctattgctcatgttttcttggttgtatggcttattagaaaatataaatgtttgctgtttttatgtttcatgcaggccatgattataattgcttggaatggtggtacaccaagtgatatctttgatgcaggagtatttaaacaggttttgagcatattcataactgctgcaatactgaaattgggtcaaggtatgctggtgtgagcttcctgttatgcagttgattgtggttaggcatttagcatgtgcgtaacatttgttttttgaaacagagaggaaaaacctcaacctcccccatctcttttgtcagaaacaattagttttgaacaaaatccagttccatgccatgctaccagaaacacatttaggaactcccagagaaacatgttggcaaaggaaccagcagacgtagatcagttcatctcaaagattttctagaataagccaaaaaccatataaccatcaggagcaaaattactccccaccaccaacagaaagttctggctttgacagcaccatcacatcatcattgcagtcccccaatttgattccaccacccatggagttgaagatttcacttgccatacgcatgagcaacttagctctttcctctgattcctgcaaccgtgaggtggatcaaatccaataacacagcgagtgaataatatcagtgcgatatttcagcaacatatctaaaacatacaatatttcaatttctggctttccacaaaggccacagaacagcagcaagactgacaatcaccagtttttgaatttgcttactgaatcctaacagccatcccccaaacaaatatgagacatgatgataaattgcaaagccaaatgtgcaatccatcacactccaaacaaaattccactcaccagcctcttttcaacaaattacccttggtttaactactgtttctcattattagctgcaggaaaaaaacatttttaggtaagttctttccacatgtcttagtgaaggaaagagcaggtatgcagtcttaaggctctatagaaggaattgacagtaaaatccttaactttatcaacagtaacatggtaaaataaatgttatagagcgagggatactgttgagatagatacctgccccccaaaacatgcacctaacatgatgatggcagtagattattgtattttatggatgatattgttttatgggtttaataattagcttccaatgcagcaattctggacatcatcctgagctggaaagcaagaagaagcatgtctcttgctggcaagctgcgctacatcttgaagttgatatcagctgctgcatgggttgtgattttaccagtaacttatgcatacacctgggagaatcctacaggtcttgcaagaacaattaaaagttggctcggtgatggtcagaatcaaccatcattatacatcttggctgttgtgatatatttagcaccaaacatgctgtcggctgtgttatttcttttcccagtccttagaagagctcttgagcgatcaaatcttaaagttgtaacattcatgatgtggtggtcgcaggtagttttcctttgtcagctttattcttattgttgattcttgataccatttaggtgctaagataccaaacatacttttcctacagcctcgcttgtttgttggtagaggaatgcatgaaggagcattctcccttttcaagtatgttcacttctataaaacattcttttgttgtttatgcttgcaccattctctctctgaggactgttattcttctaggtacacaatgttctgggtccttctcttagcaacaaaattgatagtaagctactacgtggaggtattgttttcaacttgtttcacctctcttttataagatatgttgccccagtatgtttgtgcattcaaattcatagagtgaatggtataccaaaggatttgtaggaccctaagtgttagttcagtggcggagccagcggcatcgtctaactggggcgacgaagaacgtttactagcaaccggcaattttttacatgtgttgcctaggaaaggacagtagaaacaccagtgacggagcctgggaggtggctctgccgctgtgtcaattgataaactcatataattgtatgcgtatgttgtttgctaggttcataaaatatatatttctacctggatccttgaacttgagagaacagtacattatgtttccatatcctttgcaagttgaaggaccttatgcaatgtgatctttaagacatcaaatctgtaaaaagttaagaatgtgtataagttagtcacttgtgctaatcttggcacccccaaatttaagttctaagaccatgggaaatttaggtggcttttaggccttacggtgcagctactgagctaccagccatttctgggtaagttttgcccttaaagccccagtgttaagagtaaaacttgtactgttccggatgacttttaggatattcttgcctgtaaaggttcctggtgaaattgtcatcgttacttctttctttgttaattcatctgaagtttattactcggtgtcctatgtctgacctgcagatcaagccacttgtgcgaccaacaaaagatataatgaaggagccaatacggacgtttcaatggcatgagtttttcccacacggtgtgcctcctgaaatgatgatttttgtatcaacagtttgagcatgtacttattctttttgttctacaatctgcaggaaataacaatattggtattgtaattgcactttgggctcctatcattcttgtatgcttctgcccttcttgattgttgtgatttgtgaacacaagataactatccagttttgacttgactgattcaattgttcaggtatatttcatggatacccagatttggtatgcaattttctcaacattaattggtggtatatatggggcatgtcgccgtcttggtgaggttagtaaagttggccaataccctgctttcttgtatggtagacttgaaggctttgttagtatgtgaagttgttttaagcttcttgctttgtgcatggttgcctaatttatttcatgccatgtcatgtcatgtcatggcatttgggttttgttgtgcccctctattgttgtttattgaataaataactaaccatagatactgtctttggtcccattcaatcagatacgcactttaggaatgttaagatctcgcttcgagtctttgcctaaggctttcaatcaacgcttgattccatctgattcaaataagaggagagg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0832400, RefSeq:Os02g0832400