Difference between revisions of "Os03g0107400"

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(Created page with "{{JaponicaGene| GeneName = Os03g0107400| Description = Prefoldin domain containing protein| Version = NM_001055227.1 GI:115450182 GeneID:4331329| Length = 4668 bp| Defini...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0107400|
 
GeneName = Os03g0107400|

Revision as of 19:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0107400

Description

Prefoldin domain containing protein

Version

NM_001055227.1 GI:115450182 GeneID:4331329

Length

4668 bp

Definition

Oryza sativa Japonica Group Os03g0107400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:418688..423355

Sequence Coding Region

418959..419042,419601..419798,419920..420042,420174..420211,420336..420504
,421117..423355

Expression

GEO Profiles:Os03g0107400

Genome Context

<gbrowseImage1> name=NC_008396:418688..423355 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:418688..423355 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttcaagctgcaccgccaccgctcgtcggaccgcgtcggccagcgctttgacttccgcttctccaacttccgcgccgtccaggtcccggcagtatcagacaggctgttcctttcgattgtctcagtggatactggaaagacagttgccaagtccggtaaagcagctgcccgcagtggaatttgccaatggcccgacagcatattggaatcgatatggttttctcaagatgaagtgtcaaaagaatttgatgaatgccagtacaagattgttgtttctgtgggatctataaaaagtggtgttcttggggagatcttcctaaatctcactaactttctgaatttggtggacccaaccgctatctctttgccgttgaagagatgcaactctggaacagttttacagcttaaggttcaatatcttggcgccaagtctaagtcaagtggtgtgagatcctggaaggatttgtcccctcgtctcgatgaccgtagtccaaccaatgatgacattgacagcaagtcagatggctctgatagtgttgcaaataggagtgttcgctcttcatcaggaaatcctttaggtggcactactcaagatgaacttggaaacagggaaatgagtttctcagcatctgggtcccaccggagttctaattctggagatagtaccgcggatagaacaaacttatcccctagagacagctctaatgggggtatgcatgtgggaaggcaggattctgccagctcgtacgttagcgcaagtcgtggtgatgatggatttagatcaaacaattcatctttcagttcccgtgcatcaggtccaaatgtgttgcaaggaaatactccaaaatcatttggaaatgggtttggtcagttatcattagggacatctgattcatccaaagagcttcttgaagcggctgaagaaacaattgaggaactccgtgacgaggcgaaaatgtgggaacggcattctcgcaagttgaaggctgatctggagatgttgaagaaggaatgttccgagaaatccaagcaacagactgagctagaagctgagctgtctgctgcgcatgctgaacgggattcctataggcaagaaattgaagagttgaagtcatctatgaaagaggtaaccacgcgacaaaaggttggaggaacctccaaatatggggactggatagatctgcagaaggaacttgaagatgatgtgaaatttctgaaagaatcaaatgcaaacttatccatacaactgaaaaatactcaagaagcaaatatagagcttgtttctattcttcaggagttggaagagaccatagaagaacagaaagcagaaatatctaaaatttctaaggtcaagaatgtcactgacgctgatgccttaaaaaagggtccgttagtcaaacaggacacagaatgggctaagcaactgtcaattaaagaggatgaaatcacaatgttgagggagaaactaaatcatgtgctcaatattgaaaatttaggttctgatgctgtttatcttgaacttgagaaagaaaatgaacttttaagggttaaaatacaagagcttgagaaagattgttcagagctaacagatgaaaatttggagcttatatacaagctgaaagaagtgggtggtgctacaaaaggtcaaggcccttgtattccaaacgatagcaatttgcaaattgaagagcttaaatcacagatatgtcaactggaagaggagcttaggagcaaggaattgctgcacactggaagttttgctgatgcgtcaatatctagctcaaaagtattacaggaaaaatgtgctgaccttgagctgaagctgctgaattttaggtctcaaatctatgagctagaagagaagttccaaaaaagccaagaggaactagaacaaagaaatcttgagttatctgagctgaggcagaagcttgacagttcccattccatggcaggggaaggtgttcaaactagtggtgcaagaggataccaatttagaaatggtatggatagtgaacctgagacagatgtgttgaaggctaaaattcagctacagcagcaggaaaatgatgatttgcgatgttccaaagttgaaatggaaagcgttatttctaaaattcaggcagagaagagtcagttggaggaatgcctggaagcatcacgtaaagaaagcagcatttcttcaaaatgcttggatgaggtgcggcaagatatccttgtgctttcaagcagcatagattcccatgtttctgccaataaggttctggaaagaaaggtaactgaactggagagttgcaaagctgacctagagctacatatatcggacctggaacaggaaaacatagagctatcggaacgcatttctggactcgaagctcagttgacatacatgacaaatgaaaaggagtcaagcgagctgcagatacatgattctaaatcacttatcgtcaatctcaaagataaagtagagcgccagcaagcagagatggaaactcaaaggcttgagtttaagcaaaaacaacaggaagctcagagaaaattgtctgaagcacaagatgattcagaggttctgaggagatctaattctaaactgcaatccacagttgagagccttattgaagagtgcagttctctgcagaatcaaattgcagagctgaagaggcagaaattggagttgcatggccacctcactcagcaagagcaggaattggataactcaaaaaaacgaaaccttgatttttgcaaaacagtcgaattcctagaggcaaagctttcttcacttcagaaagacatttcttccaaagagcagtctttactatcagaactggagagtatattccaggagcacacgg</cdnaseq>

Protein Sequence

<aaseq>MFKLHRHRSSDRVGQRFDFRFSNFRAVQVPAVSDRLFLSIVSVD TGKTVAKSGKAAARSGICQWPDSILESIWFSQDEVSKEFDECQYKIVVSVGSIKSGVL GEIFLNLTNFLNLVDPTAISLPLKRCNSGTVLQLKVQYLGAKSKSSGVRSWKDLSPRL DDRSPTNDDIDSKSDGSDSVANRSVRSSSGNPLGGTTQDELGNREMSFSASGSHRSSN SGDSTADRTNLSPRDSSNGGMHVGRQDSASSYVSASRGDDGFRSNNSSFSSRASGPNV LQGNTPKSFGNGFGQLSLGTSDSSKELLEAAEETIEELRDEAKMWERHSRKLKADLEM LKKECSEKSKQQTELEAELSAAHAERDSYRQEIEELKSSMKEVTTRQKVGGTSKYGDW IDLQKELEDDVKFLKESNANLSIQLKNTQEANIELVSILQELEETIEEQKAEISKISK VKNVTDADALKKGPLVKQDTEWAKQLSIKEDEITMLREKLNHVLNIENLGSDAVYLEL EKENELLRVKIQELEKDCSELTDENLELIYKLKEVGGATKGQGPCIPNDSNLQIEELK SQICQLEEELRSKELLHTGSFADASISSSKVLQEKCADLELKLLNFRSQIYELEEKFQ KSQEELEQRNLELSELRQKLDSSHSMAGEGVQTSGARGYQFRNGMDSEPETDVLKAKI QLQQQENDDLRCSKVEMESVISKIQAEKSQLEECLEASRKESSISSKCLDEVRQDILV LSSSIDSHVSANKVLERKVTELESCKADLELHISDLEQENIELSERISGLEAQLTYMT NEKESSELQIHDSKSLIVNLKDKVERQQAEMETQRLEFKQKQQEAQRKLSEAQDDSEV LRRSNSKLQSTVESLIEECSSLQNQIAELKRQKLELHGHLTQQEQELDNSKKRNLDFC KTVEFLEAKLSSLQKDISSKEQSLLSELESIFQEHT</aaseq>

Gene Sequence

<dnaseqindica>272..355#914..1111#1233..1355#1487..1524#1649..1817#2430..4668#acctttcttcttcttcttcttcttcgcggcgacatggcgcgcgagggggaggggtggatccatgaccatgagtagcttacgaggattccccaagcccaccacccaccacccaccgccaccttttgttccgcaaccgcaatgatttcttcttcttgtaccacactgcttctgctgctgccgacgccgccgccgccgccgccaccagcaaaccccaatctcgcctgaccaccgttccccacctcgcctcgcctcgcctcgccgccgatacacgatgttcaagctgcaccgccaccgctcgtcggaccgcgtcggccagcgctttgacttccgcttctccaacttccgcgccgtccaggtaccatgctctcctctcgatcccccattccttcttgccctcctcaccttgccccttgggattcggattcggattcggattcctcgcatggggaatcaatcgcttgctttgcgacctcgattcatctacgtagctcaccagcatccaaggtttcgcatttcctgcatctgctacctactatcaccccatacttccctgctccaattcatccattctgtcattctatgccaaatgagcaattttccctaataaaaaagacaactttgtgcaaccacaccggtcgtcttggggtgccactcacaggatgtttcgtttcagagagcacagcatttatactcatcttgtaactggcatgttcaattctcacaactagcacaaattcacatcccaatggagcgcaatgccgtcccaattatagtgtgcatctagttgttatcctggtaataaatgaatacagaagcctgcataatgtgctatgatttcagctgcatttccggcagtacctctcgtacgcatattcccccgtctttatatcttactgatctgtgtttttgacaggtcccggcagtatcagacaggctgttcctttcgattgtctcagtggatactggaaagacagttgccaagtccggtaaagcagctgcccgcagtggaatttgccaatggcccgacagcatattggaatcgatatggttttctcaagatgaagtgtcaaaagaatttgatgaatgccagtacaagattgttgtttctgtggtatggatattgcttgcattgttatagattttgctttcagccatatgtagcctatcatagtgatgttgctcaactttactgttgtttgtttgtgtcactaccaacaattctcatgttgcagggatctataaaaagtggtgttcttggggagatcttcctaaatctcactaactttctgaatttggtggacccaaccgctatctctttgccgttgaagagatgcaactctggaacagttttacaggtaactttactgattttatacttttccttctaaagctattttttccctcaatacattgactcggttcttagtgttatgtgttcctttccccaaaaaaaatgcttatagtgcaatttgttcttcctgtgcagcttaaggttcaatatcttggcgccaagtctaagtcaaggtaactaattctgaagcttcagctttgttccccttattttcttgtcctacaacacagcctttaagtctcactatactgttttcccactatatttcccctttaccatgttcccatttctacgcagtggtgtgagatcctggaaggatttgtcccctcgtctcgatgaccgtagtccaaccaatgatgacattgacagcaagtcagatggctctgatagtgttgcaaataggagtgttcgctcttcatcaggaaatcctttaggtggcactactcaagatgaacttggaaacagggtatgcaaatgtttaaaacaattttctccatcctaagttcattcgtcttctctaaaacgtgttaatttaatttttgattgtttagactcatatctccaatactaagcatgccattcttgttggaggactctcgagatggtttctcatttgactgttaaatttcactggaaatgctaattggtttggttacagatgttaggctcttctgatgctccatctgttcaatttctaagccatttgctacttcaatatggttatgataattccctaaacatatagttatgctaagttggaataccccagtttctatgtcctgatatgtagataccctggaaagaaatgaaacaaaatatccacttttggggccttttcttcaaagccaactcctgactctaaagtcatttgctattgttcattagaacatattgttaatttgttttgcatatttctcacgtgctaaatattcatctatattgtgtgggaactctagctccatgaatgtctatatgttttgttttatgtgggcataaatatcacttctgtcattttgcgggcgacgtttataagagcattatgcgtgcatgattattccctgtcttctttttttcccaggaaatgagtttctcagcatctgggtcccaccggagttctaattctggagatagtaccgcggatagaacaaacttatcccctagagacagctctaatgggggtatgcatgtgggaaggcaggattctgccagctcgtacgttagcgcaagtcgtggtgatgatggatttagatcaaacaattcatctttcagttcccgtgcatcaggtccaaatgtgttgcaaggaaatactccaaaatcatttggaaatgggtttggtcagttatcattagggacatctgattcatccaaagagcttcttgaagcggctgaagaaacaattgaggaactccgtgacgaggcgaaaatgtgggaacggcattctcgcaagttgaaggctgatctggagatgttgaagaaggaatgttccgagaaatccaagcaacagactgagctagaagctgagctgtctgctgcgcatgctgaacgggattcctataggcaagaaattgaagagttgaagtcatctatgaaagaggtaaccacgcgacaaaaggttggaggaacctccaaatatggggactggatagatctgcagaaggaacttgaagatgatgtgaaatttctgaaagaatcaaatgcaaacttatccatacaactgaaaaatactcaagaagcaaatatagagcttgtttctattcttcaggagttggaagagaccatagaagaacagaaagcagaaatatctaaaatttctaaggtcaagaatgtcactgacgctgatgccttaaaaaagggtccgttagtcaaacaggacacagaatgggctaagcaactgtcaattaaagaggatgaaatcacaatgttgagggagaaactaaatcatgtgctcaatattgaaaatttaggttctgatgctgtttatcttgaacttgagaaagaaaatgaacttttaagggttaaaatacaagagcttgagaaagattgttcagagctaacagatgaaaatttggagcttatatacaagctgaaagaagtgggtggtgctacaaaaggtcaaggcccttgtattccaaacgatagcaatttgcaaattgaagagcttaaatcacagatatgtcaactggaagaggagcttaggagcaaggaattgctgcacactggaagttttgctgatgcgtcaatatctagctcaaaagtattacaggaaaaatgtgctgaccttgagctgaagctgctgaattttaggtctcaaatctatgagctagaagagaagttccaaaaaagccaagaggaactagaacaaagaaatcttgagttatctgagctgaggcagaagcttgacagttcccattccatggcaggggaaggtgttcaaactagtggtgcaagaggataccaatttagaaatggtatggatagtgaacctgagacagatgtgttgaaggctaaaattcagctacagcagcaggaaaatgatgatttgcgatgttccaaagttgaaatggaaagcgttatttctaaaattcaggcagagaagagtcagttggaggaatgcctggaagcatcacgtaaagaaagcagcatttcttcaaaatgcttggatgaggtgcggcaagatatccttgtgctttcaagcagcatagattcccatgtttctgccaataaggttctggaaagaaaggtaactgaactggagagttgcaaagctgacctagagctacatatatcggacctggaacaggaaaacatagagctatcggaacgcatttctggactcgaagctcagttgacatacatgacaaatgaaaaggagtcaagcgagctgcagatacatgattctaaatcacttatcgtcaatctcaaagataaagtagagcgccagcaagcagagatggaaactcaaaggcttgagtttaagcaaaaacaacaggaagctcagagaaaattgtctgaagcacaagatgattcagaggttctgaggagatctaattctaaactgcaatccacagttgagagccttattgaagagtgcagttctctgcagaatcaaattgcagagctgaagaggcagaaattggagttgcatggccacctcactcagcaagagcaggaattggataactcaaaaaaacgaaaccttgatttttgcaaaacagtcgaattcctagaggcaaagctttcttcacttcagaaagacatttcttccaaagagcagtctttactatcagaactggagagtatattccaggagcacacgg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0107400, RefSeq:Os03g0107400