Difference between revisions of "Os03g0110400"

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(Created page with "{{JaponicaGene| GeneName = Os03g0110400| Description = Conserved hypothetical protein| Version = NM_001055250.1 GI:115450228 GeneID:4331353| Length = 6824 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0110400|
 
GeneName = Os03g0110400|

Revision as of 19:26, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0110400

Description

Conserved hypothetical protein

Version

NM_001055250.1 GI:115450228 GeneID:4331353

Length

6824 bp

Definition

Oryza sativa Japonica Group Os03g0110400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:580854..587677

Sequence Coding Region

580990..581136,581278..581361,581501..581575,581894..581975,582080..582225
,582339..582410,582767..582839,582935..583000,583147..583193
,583318..583389,583496..583624,583708..583815,584325..584441
,584532..584614,585347..585413,585707..585778,585876..585926
,586706..586765,586869..587018,587109..587324

Expression

GEO Profiles:Os03g0110400

Genome Context

<gbrowseImage1> name=NC_008396:580854..587677 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:580854..587677 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggagcccacgccgccgctgccgtcgaacgccgggctccgcatcctcctcagcaaggaccggccaccggcctcctcttcctccgcgctcgccgccgccacctccgccgccgtctccagccacaccgaccgcgaccgcatcatcggagtgttccgggatgcgctgtctaggactgaatcccctgaagcttttgcccttcaggccgttcaggatgcgattaaacctcagaagcaaacagtgttggttctggaggagaaccaatccttagaaaatgctctacgcaaattgctgcaggaacttgcatcatctgcagttcaatctggtaaaagaataatgcaatatggggataatgaagaaaataattgcccgataacacgtcttcttgatatcgtgctttacctttgtgaaagagggcatgttgagggaggtatggtattccagctgttagaagatctgacagaaatgtcaactatcaaagactgcaaagatgtatttggatatattgagagcaaacaagatgtcttggggaagcaagagcttttcgggcgtggcaagcttgttatgctaaggacttgcaaccaactacttcgaagattatcaaaggcaaatgatgtggtattctgcggacgtattatcatgtttctagcacatttcttcccattatcggaacgttcagctctcaatatcaagggggtttttaacacatcaaatgaaacaaagtacgagaaagacgctacagatggaatttctgttgatttcaacttctacaataccctatggagtctgcaggagcattttagtaaccctgctttaactgctgcaaatctgacaagatggcaaaagtttgtgtccaatttaacggttgtgctaagcacatttgaagctcagcctctcagtgacgatgatggaaaacttaacaatcttgaccaagaggaagatgctgctttcaatattaagtacctgacaagtagtaaattgatgggtttggagttgaaggacccaagttttcgacgccacatccttgtccagtgcctcatattcttcgactttctcaaggcacctggaaagactgacaaagaaggtccaactgggagcatgaaagaggaaatcgattcttgtgaagagcgtgttaagaaacttctggagataattccaccaaaagggaaggacttcctacaaagcatcgagcatattcttgagcgggagaaaaattgggtatggtggaaacgagatgggtgtctagcgtttgaaaaacaaccttttgaaaagaaaccaggccaagctggagtcagaaaacgtaagccaaggtggagattgggaaacaaagaacttgcccaactgtggaaatgggctgaacaaaaccctaatgctctgactgattctgaacgtatttgcatgccatcagtaacagaatattggaaaccacttgcagaagatatggatccatctgctggtattgaggatgaatatcaccacaagaataatcgtgtgtattgctggaaagggttacgattttcagccaggcaggatttggaaggtttttctcggttttgtgattacggtattgaaggagttgtacctcaagaactgttgccacctgaagtccgttccaagttttattcgaagcctggtgacaaggctaaacgacctaagagggaagacccaaaaggcacttcagcccaacccaaggaacaacaggttgtttcagccacaccggagaccgacggtggcggtagcggggctgaaccagaagaaggtgctgtgccaatggattctgataatgccgcgatcgatgaaggccggaagcagagcccagaggaggtgtctggacctgaaagcgggcagtgcgaggctgaagccgatggcgaagataacatgaaaaatgaggctagtaaagacggtccatccgcatag</cdnaseq>

Protein Sequence

<aaseq>MAEPTPPLPSNAGLRILLSKDRPPASSSSALAAATSAAVSSHTD RDRIIGVFRDALSRTESPEAFALQAVQDAIKPQKQTVLVLEENQSLENALRKLLQELA SSAVQSGKRIMQYGDNEENNCPITRLLDIVLYLCERGHVEGGMVFQLLEDLTEMSTIK DCKDVFGYIESKQDVLGKQELFGRGKLVMLRTCNQLLRRLSKANDVVFCGRIIMFLAH FFPLSERSALNIKGVFNTSNETKYEKDATDGISVDFNFYNTLWSLQEHFSNPALTAAN LTRWQKFVSNLTVVLSTFEAQPLSDDDGKLNNLDQEEDAAFNIKYLTSSKLMGLELKD PSFRRHILVQCLIFFDFLKAPGKTDKEGPTGSMKEEIDSCEERVKKLLEIIPPKGKDF LQSIEHILEREKNWVWWKRDGCLAFEKQPFEKKPGQAGVRKRKPRWRLGNKELAQLWK WAEQNPNALTDSERICMPSVTEYWKPLAEDMDPSAGIEDEYHHKNNRVYCWKGLRFSA RQDLEGFSRFCDYGIEGVVPQELLPPEVRSKFYSKPGDKAKRPKREDPKGTSAQPKEQ QVVSATPETDGGGSGAEPEEGAVPMDSDNAAIDEGRKQSPEEVSGPESGQCEAEADGE DNMKNEASKDGPSA</aaseq>

Gene Sequence

<dnaseqindica>137..283#425..508#648..722#1041..1122#1227..1372#1486..1557#1914..1986#2082..2147#2294..2340#2465..2536#2643..2771#2855..2962#3472..3588#3679..3761#4494..4560#4854..4925#5023..5073#5853..5912#6016..6165#6256..6471#ccgcatccgccgtcgcctgcgcgccgccggaggccggagcccgccgccgtgggatactagtccagcttggaagcggggagggagaggctccagccagtgtgccgaaacctacccttccattctgacccaccacgccatggcggagcccacgccgccgctgccgtcgaacgccgggctccgcatcctcctcagcaaggaccggccaccggcctcctcttcctccgcgctcgccgccgccacctccgccgccgtctccagccacaccgaccgcgaccgcatcatcgtgagttgtccactctcctatctagtatgcccccgggggtgccagtgtgggaggatgtcatgaaccgagggttttctgtcaatttgcgcggaattatttctgtgttgtgcagtagatttgagaaatctcgtttgttcacagggagtgttccgggatgcgctgtctaggactgaatcccctgaagcttttgcccttcaggccgttcaggatgcgattaaacctcaggtacacaatgcaccacagtcagccatgcttgtaggcttgtagctttctcatagatgatggattactgtacttgatgttccttgcgttgtcttgtgcatacacacgtttttaagttagttgctcatctgattttttgcagaagcaaacagtgttggttctggaggagaaccaatccttagaaaatgctctacgcaaattgctgcaggaacttgcagtaagcttccttaccacgcatgtgcctgcactagtctttgttctctgtaacaacactattacaaagtaatgtggtagtagatgattttttttttggggtcactgtctcacatttacaagttagcgtaatgcaacttctcctttctccatacatttcattaagtttctatcttctgtttaataaccgtctgcaagtatttaccatgtacctgaacgataggtagttctattgttcaaattgtgcaatccttacttgcctgtcatgcagccctatagattaatgcttgttgctgatttcgtttcatatctatatttgtagtcatctgcagttcaatctggtaaaagaataatgcaatatggggataatgaagaaaataattgcccgataacacgtcttcttggttagttggaacctttttactgctcctttctcacattggttcctgagcactatttagagatttatctgttttctcttgagagatcttcttttttttcatgttagatatcgtgctttacctttgtgaaagagggcatgttgagggaggtatggtattccagctgttagaagatctgacagaaatgtcaactatcaaagactgcaaagatgtatttggatatattgagagcaaacaagatgtcttggggaaggtaattgagaatttgtcttttgtactacattttgttaaattggtgcttgtaaggcacatatgatgtatgcagttgctttgctaatggggattacctcattgagttgtttgtagcaagagcttttcgggcgtggcaagcttgttatgctaaggacttgcaaccaactacttcgaagattatcaaaggttagattcatctgttttcttatgcatactctgctatctactttgtcgtagtccgaatgtctgtagattgaaatcattctgtgctttccttattttctgtgctgagcagttttatcaagtactaagctgactgctgtgctcactgttcagtaagatctttggtaatgacaaatttactgtaaaaataccaagctattggacatatcataaaaatcgtattgtacattgcgatgttgtggtccttttgctttagtgagtattgaacaaatatattctttacatttctcggagttttgacagcctataaggttgtgttctgtactagcattgataccctttgttctgaaataccacaggcaaatgatgtggtattctgcggacgtattatcatgtttctagcacatttcttcccattatcggaacgttcaggtttgcatattttgcatctctctgtcccctcctagacagccccttattggcaaggagtgcataactacattttccttgtttttctattttatcagctctcaatatcaagggggtttttaacacatcaaatgaaacaaagtacgagaaagacgctacagatggtgagtatgactatcctgataaaaaaaatatttattatttttttgttgtgtgtttttcgtgtgactttattcaattttttatttcttcagtcaactgttctcgtaaaaggatagaactccctaatgtaagcctttttttttctcaggaatttctgttgatttcaacttctacaataccctatggagtctgcaggtggctgctttgtaccctgtcattctgtgggattcaaaaatcataattgattcctgacacgcttcttaacttttaaacattatattgtttctcatgctcatttgtctttttatttatgttccaggagcattttagtaaccctgctttaactgctgcaaatctgacaagatggcaaaagtttgtgtccaatttaacggtacatccttttgcgcatttttacaattacatgaacctttttctttcccaatgcaaaatgttaattctgaacttctcgttgatgtttactgttaatgaaagtgcaggttgtgctaagcacatttgaagctcagcctctcagtgacgatgatggaaaacttaacaatcttgaccaagaggaagatgctgctttcaatattaagtacctgacaagtagtaaattgatgggtttggaggtaagaactttttgatcagctgatactaactttttattattgttcactgttcatagactcatatggcaattgcttctttgcagttgaaggacccaagttttcgacgccacatccttgtccagtgcctcatattcttcgactttctcaaggcacctggaaagactgacaaagaaggtccaactgggagcatggttagtccactaaatgacttctctgattgttttccatggacagttgaacttagacttgagcatctgaaattgtgctgttaccaaatttttagtattcacctattactacatgattgctcttgagtttgtgatagtcacaacagcaaatgtggcaaagctagcattagttctcatgaaaccatcagctcctttttctgtgcatgctatgtgagatcgtaagtagtctgtgatagctattcccattttagttgaaccgattattatcacttattagcatacttctcacagcgtgtgctactgggcatgtaagtattaacaaacactgattgcacaaattgtccaaaccgtatgaagttgcttggcagtgctagtttttagtataacagtgccaactaataccaactgcctgcctgatacaactgggttatagtggctagtacagacaatgaatcaggattaaggaaatgccactctgtactctgtattaactttatgctctctacaatcagaaagaggaaatcgattcttgtgaagagcgtgttaagaaacttctggagataattccaccaaaagggaaggacttcctacaaagcatcgagcatattcttgagcgggagaaaaattgggtatcctcttagctgcatgtaagcaatattttatcttaacatagtaattctcacaaccaatgattctgttcctgctggctcaacttgaaggtatggtggaaacgagatgggtgtctagcgtttgaaaaacaaccttttgaaaagaaaccaggccaagctggagtcagaaaacggtatgctacttcctttcttctggcactgaatttgccattagtctattattggttctgctgttgatgtgctagcctatcataatgtgtaacagttacaatagatttgaaatgattttagtgctaactaaaagaacagcagctatcaactgtgatattgtcttattaaatacatcccgcaaagcatactgtttataattttgatggtactgggagcaccatatcctaaacattgtgtcactgggagcattaacttcaaatacactttatctgaattaccatggagcagacaaattagttattttataattttgtgctgccagtttttttaatgttcgccagaagcaagaatcatgaatttcacctgtttcacatcaacattcttatatagtgtcaacttacaatgttatggatttagatgtgttgttatatgtatgaagttcacaatttgtattcatttgtgctaatgcaactagtttcatatttttcatgagtgaagagtgtaagaatggtctttgatatcgattgcctcgttgagtagttgtttgtggcataggtttatttagagaaaaggtaaaaaaacaaattagtaggaaatatagcatagattcttggagttaacaagccagtattctacttcacatcctcatgtcgatttgtaatatgaattcacacaagaaagtccatgtccaaatgcaatctaattctttgatattttgctttccttccttgtagtaagccaaggtggagattgggaaacaaagaacttgcccaactgtggaaatgggctgaacaaaaccctgtatgttctaccaagcatcccattactattatgtttgacttgttactaatagatttgcataatccagtttaaaagggttccatccgttgagttccctatctgtgcctttctgagtcattttctatccttttgtcatgcaacactctactatttgaaggcatacatcttccattaatcggcctttctcatcactttttatcattttgtgatgcaacttgtccaacatttaaattcatcatttttttagcatttatttttttgcatctgacttctaatttctccgtgagctgcagaatgctctgactgattctgaacgtatttgcatgccatcagtaacagaatattggaaaccacttgcagaagatgtaagtgtttcaatttatatagtcatttttatccgtcctttttgctttgagcaaaccaatttattagtgcaatcctctaattatgtgtaacttacagatggatccatctgctggtattgaggatgaatatcaccacaagaataatcgtgtgagtatagatctcagcaacactatttcctgttgagatgattatactaaaatttggttctgtgatgactgtaccagaacccaattaataaacagggtatagcataggctatttacatttaggatctggtttaaataggaagatatatcacctctcggggagctaaaatacaattattcttctaagcgggtactgctaagactaatgctaaaaagactgggtctattaccatgttacaaatgtcatccaacctcccaatttttcagtaggagtggtatttgttagcctttatttgtttgctcgtattgggtgaatatgttgatccatgtgggaattaaatcaagcataagtgcacttctgtgcttacattattcaaataaaatgttgaagtaagcacatccaccttcttcaatagaacttaggtacttcatagtttattaaaatcaagtgcatgatctactagagcaaatgataccgtacattgttatcatgtgtagcaaaagagaatctgatatagttctggtctactgatggatcatagcgtgacatgtcccactcccacacagtgatagagatgggttgaatcacattaggaagaaacaaaatatcctgggcatttgtcagagtctcggtcatgatgaaaacgaggactttgtttcatagtacttccatggacactgagatcaagaattttgtttccatatgacctgataatgaaaacagatggtatttttatctctccaatatgattgtctcacgaccagcattttatttgacaggtgtattgctggaaagggttacgattttcagccaggcaggatttggaaggtttttctcgggtatgcgttatgctatgaagcctcacagcattctttttctcattcatatatgctggatggaaataattgtgcatcccatgacctctactcaatcccattccagttttgtgattacggtattgaaggagttgtacctcaagaactgttgccacctgaagtccgttccaagttttattcgaagcctggtgacaaggctaaacgacctaagagggaagacccaaaaggcacttcagcccaacccaaggaacaacaggtacttggctcaccgtcttgatcaaacttggacgagcaataacttcagaattgcgctgctgatatatttccggtgcattcctgtgtgaaggttgtttcagccacaccggagaccgacggtggcggtagcggggctgaaccagaagaaggtgctgtgccaatggattctgataatgccgcgatcgatgaaggccggaagcagagcccagaggaggtgtctggacctgaaagcgggcagtgcgaggctgaagccgatggcgaagataacatgaaaaatgaggctagtaaagacggtccatccgcatagaacctctgccggaagattttgtagtatcctgttgccgacgtttctactgagatcgcccatctttagagttactgtgaccccccagattgagacatccaggctccagattgttttaaagaagatagagagacatgtatctagtccactgaacacagaattttaatgaatcatcagtagctgacgccatgccttagcctgacatgtgtatatagacagcttgttcgttgaagtgttatcttgcatcctgggtcccctcctgtgtgtgtttactgttcggtgtagcatactgcttggagtacactataggagtactagtatgtatcaagctcaatttaccgtaccagtttatggtg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0110400, RefSeq:Os03g0110400