Difference between revisions of "Os03g0115100"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0115100| Description = Mevalonate and galactokinase family protein| Version = NM_001055284.1 GI:115450296 GeneID:4331392| Length = 4762 bp|...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0115100|
 
GeneName = Os03g0115100|

Revision as of 19:27, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0115100

Description

Mevalonate and galactokinase family protein

Version

NM_001055284.1 GI:115450296 GeneID:4331392

Length

4762 bp

Definition

Oryza sativa Japonica Group Os03g0115100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:830730..835491

Sequence Coding Region

830886..831284,831513..832207,832370..833389,833572..833698,834344..834711
,834782..835061,835139..835468

Expression

GEO Profiles:Os03g0115100

Genome Context

<gbrowseImage1> name=NC_008396:830730..835491 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:830730..835491 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagccggccgagcgtcaccggcggcggcggcggagggcgcacacggcggacgaggcggcggcggtgctgcggaaggcgtggtgccggctgcggctatcggcgcgggatccgtcgcgggtgccgccgtgggacgccgtcgtcctcaccgcggccagccccgagcaggccgcgctctacgaccgccagcttgcgcgcgcccgccgcctcggccgcttcccggcctccaccgccgccctcgccgtccccgaccccgacgccgcgcgcatcggctccggcgccgccactctccacgccgtcgcctccctcgtccgccatctcatcgcccaggcttccaaggaagagatcgccgaattgctgcccgaagcaagtgattcttcagcagatgacatcccactcagctcggtggtacgattcatggcgaacaaacacgtactgctgcttcacgctgggggtgatagcaagagggttccatgggcgaaccccatggggaaggccttcctgcctctgccttacttggccggagacaatcctgatggacctgttccgctgcttttcgaccacattctcgcgatctcatccagcgcaaggcaagctttcaaaaaccaaggtgggatcttcataatgaccggggatgttctcccatgcttcgatgcttcaaacctagttcttcctgatgatgctgcttgcatcgtcaccgtgccaacaactctagatgtggctgctaatcatggtgtagttgtagcggcaaaggacggaactgatggggagaactattccctgtgtttggttgataatctcctccagaagcctacagtgcacgagcttgtggagggccaggctattcgagatgacgggagagcactgcttgacacagggataatatcagccaggggtaaagcatggcaggagcttgttagacttgcatattcatctagccatgtcatgatcaaggagctcataactggcagaaaagagatgagcttatacgaagatcttgttgctgcatgggtgccttccaggcatgaatggttaaggacccgtccatttggcatggaactaattgctgctttgggaaagcacaggatgttcagcttttgttcatatgatttctcatttttacattttggcacatccgctgaagttcttgatcacttggcgggctcatattcaggacttgtagggcgaaggcacatgtcttcgataccagagactactgcttgtgatattgcggcaacagctgtcattttgtccagtaaaatttctgctggggtctcagttggagaggattcattggtctatgattcatcactttcaggtagaattaggattggctcacaatgtattgttgttggggtgaatatacatgagttacatgggaacaggtctcagataatcagtactagctcatacttcacattacctgatcgacattgcctctgggaagtccctttggtaaactctgtggaaagagtaatggtttactgtggccttcatgataatccaaaagtatctatgaagaaagatgggacattctgtggcaaaccatggagaaatgtcttggaacatcttaaaatccaggatacagatctgtggagctcaaccaatgaagacaactgcttatggaatgcaaagctttttccagtcatgtctctacctgaaacgctgaaagtaggtatgtggcttatgggatcgacatgtgacctggatggcaaagtcgcttccctgtggaaagaatcacggaggatcagcttagaagagctgcatcgttcgattgactaccatcagctctgtgtgaattcaagcaagcatcaagcagatctagcaaccaacattgctaaagcttgcatgacctatggcttgcttgggcgcaacctgtttcaactatgtgaggaaatgctacaaaaggaaaattcatgcgtagaagtctgtaatgagttactttcgctttgtcccagtcatggggatcagtattctggtgttcttccgcagagcagaagataccaggtcaaaatggatctgcttacagcttctggagatctttccactgcagctattgttgaagataaagtgtgggcttccatagcaagtgaaactgcatcagctataaaatatggatctaaagagccatcaagcgattccaagtgttcaagtaatggtaacctgcatcctaagaaggctattgtggaattaccggtccgtgtcgactttgtcgggggttggagtgatacacctccatggagtttggagcgtccaggttgtgttttgaatatggcaatacggttggaagggaaccttccagttggtgctatgatagagacaacaatggaccaccttggagttctcattgaagatgatgctggcagaaatgtttgtattgatgacctgtcttctattacttcaccattcaaagaaaatgattcattccgtttagtcaagtctgctcttattgtgactggtgtcctaaaccatgaaagattgtcaaaattagggttgaacattaggacatgggcaaatgttcctcgtggaagtggtctgggaacttctagcatattagcagctgcggtagttaaggggctattccaacttatagaaggtgatgaaagtgatgcaactgttgctagagctgtgctggtagtagagcaagtaatgggcacaggcggtggatggcaagatcaaattggtggcctatatcctggaatcaagtgcactcagagttttccaggacagccattgcgtttgcatgttgttccattgctggcatctccgcagttgattcaagaattacaacaacgtctcctggttgtgttcactggtcaagtaaggcttgcccaccgggtcctgcagaaagttgtcactcgatatctccgccgtgatagcctgttgatatctagcatcaagaggcttgctgagttggcgaaaattggaagggaagccctgatgaatggtgaaatagacgagcttggtggcataatgtcggaggcctggaggctgcatcaggagctagatcctttttgcagcaacaagcttgtggacgaattgtttgcatttgctgacccttactgctgcggctacaagcttgttggagctggtgggggcggctttgcgttgatgcttggaaagaatcttaactctgccaaagaactcagacaagcactcgagaattctgccaccttcgatgtaaaggtgtacaactggaacgttgctatgacaccatga</cdnaseq>

Protein Sequence

<aaseq>MEPAERHRRRRRRAHTADEAAAVLRKAWCRLRLSARDPSRVPPW DAVVLTAASPEQAALYDRQLARARRLGRFPASTAALAVPDPDAARIGSGAATLHAVAS LVRHLIAQASKEEIAELLPEASDSSADDIPLSSVVRFMANKHVLLLHAGGDSKRVPWA NPMGKAFLPLPYLAGDNPDGPVPLLFDHILAISSSARQAFKNQGGIFIMTGDVLPCFD ASNLVLPDDAACIVTVPTTLDVAANHGVVVAAKDGTDGENYSLCLVDNLLQKPTVHEL VEGQAIRDDGRALLDTGIISARGKAWQELVRLAYSSSHVMIKELITGRKEMSLYEDLV AAWVPSRHEWLRTRPFGMELIAALGKHRMFSFCSYDFSFLHFGTSAEVLDHLAGSYSG LVGRRHMSSIPETTACDIAATAVILSSKISAGVSVGEDSLVYDSSLSGRIRIGSQCIV VGVNIHELHGNRSQIISTSSYFTLPDRHCLWEVPLVNSVERVMVYCGLHDNPKVSMKK DGTFCGKPWRNVLEHLKIQDTDLWSSTNEDNCLWNAKLFPVMSLPETLKVGMWLMGST CDLDGKVASLWKESRRISLEELHRSIDYHQLCVNSSKHQADLATNIAKACMTYGLLGR NLFQLCEEMLQKENSCVEVCNELLSLCPSHGDQYSGVLPQSRRYQVKMDLLTASGDLS TAAIVEDKVWASIASETASAIKYGSKEPSSDSKCSSNGNLHPKKAIVELPVRVDFVGG WSDTPPWSLERPGCVLNMAIRLEGNLPVGAMIETTMDHLGVLIEDDAGRNVCIDDLSS ITSPFKENDSFRLVKSALIVTGVLNHERLSKLGLNIRTWANVPRGSGLGTSSILAAAV VKGLFQLIEGDESDATVARAVLVVEQVMGTGGGWQDQIGGLYPGIKCTQSFPGQPLRL HVVPLLASPQLIQELQQRLLVVFTGQVRLAHRVLQKVVTRYLRRDSLLISSIKRLAEL AKIGREALMNGEIDELGGIMSEAWRLHQELDPFCSNKLVDELFAFADPYCCGYKLVGA GGGGFALMLGKNLNSAKELRQALENSATFDVKVYNWNVAMTP</aaseq>

Gene Sequence

<dnaseqindica>4208..4606#3285..3979#2103..3122#1794..1920#781..1148#431..710#24..353#gaggagcaaaagtcgctcgatcgatggagccggccgagcgtcaccggcggcggcggcggagggcgcacacggcggacgaggcggcggcggtgctgcggaaggcgtggtgccggctgcggctatcggcgcgggatccgtcgcgggtgccgccgtgggacgccgtcgtcctcaccgcggccagccccgagcaggccgcgctctacgaccgccagcttgcgcgcgcccgccgcctcggccgcttcccggcctccaccgccgccctcgccgtccccgaccccgacgccgcgcgcatcggctccggcgccgccactctccacgccgtcgcctccctcgtccgccatctcatcgcccaggtccagccacttctgccctatgtactactactacagaatcgatcccctcccctgtttaacatcatctgaatctgcaggcttccaaggaagagatcgccgaattgctgcccgaagcaagtgattcttcagcagatgacatcccactcagctcggtggtacgattcatggcgaacaaacacgtactgctgcttcacgctgggggtgatagcaagagggttccatgggcgaaccccatggggaaggccttcctgcctctgccttacttggccggagacaatcctgatggacctgttccgctgcttttcgaccacattctcgcgatctcatccagcgcaaggcaagctttcaaaaaccaaggttgtagcttatagacagagccactgattttgagcaatatgttcaattttaattggtacagtatgatcaggtgggatcttcataatgaccggggatgttctcccatgcttcgatgcttcaaacctagttcttcctgatgatgctgcttgcatcgtcaccgtgccaacaactctagatgtggctgctaatcatggtgtagttgtagcggcaaaggacggaactgatggggagaactattccctgtgtttggttgataatctcctccagaagcctacagtgcacgagcttgtggagggccaggctattcgagatgacgggagagcactgcttgacacagggataatatcagccaggggtaaagcatggcaggagcttgttagacttgcatattcatctagccatgtcatgatcaaggagctcataactggcagaaaagaggtgagcaaatatttcctaacacactgtccaatttttcacaacaggctctctcatttactgcagacttgcttcatcgaatcaaggctatgtgattattctgaaaatgcatgtgttgcatttgtagtagttggagatatcggtctactaatgagcaacttcccttaaaagacataatcactcattacttcagtttgggagttataaataaatttgctataattcttgcagtgctggatgctcttctagctgtacaatacaatattctatcatcctgaattttacgaaagttagatgctgtctgtctctgtttcgctctttgctttgatatgctagaagcaacagtagtctgcttttccatcctaaagagaggcattggcattgttaggctgctttatgttttattttatattgagaccagattttcctaaccttttttctttgtcatgataaagctctgaatattccaaacctcattaatctcatctttatggaattttttttgttagaccagaaattcaaagtgacgtcctaaactcattttcttttgctccattgcttccattagttacgtttatcatttatctaactgtagatttgatataatatatttcatttcgtgggttcatattacccgatctattgcagatgagcttatacgaagatcttgttgctgcatgggtgccttccaggcatgaatggttaaggacccgtccatttggcatggaactaattgctgctttgggaaagcacaggatgttcagcttttgttcatgtatgttctctttagaattcattatgtagcagttgcaagtaaattatgctgattctctttctggtatggctgtgcattaaattctcctgtatttgacaaacagttcacatgttatatttctgattagttttgtgtgatattatgccttttgcaaagctaagttgtgaccattttcttttcagatgatttctcatttttacattttggcacatccgctgaagttcttgatcacttggcgggctcatattcaggacttgtagggcgaaggcacatgtcttcgataccagagactactgcttgtgatattgcggcaacagctgtcattttgtccagtaaaatttctgctggggtctcagttggagaggattcattggtctatgattcatcactttcaggtagaattaggattggctcacaatgtattgttgttggggtgaatatacatgagttacatgggaacaggtctcagataatcagtactagctcatacttcacattacctgatcgacattgcctctgggaagtccctttggtaaactctgtggaaagagtaatggtttactgtggccttcatgataatccaaaagtatctatgaagaaagatgggacattctgtggcaaaccatggagaaatgtcttggaacatcttaaaatccaggatacagatctgtggagctcaaccaatgaagacaactgcttatggaatgcaaagctttttccagtcatgtctctacctgaaacgctgaaagtaggtatgtggcttatgggatcgacatgtgacctggatggcaaagtcgcttccctgtggaaagaatcacggaggatcagcttagaagagctgcatcgttcgattgactaccatcagctctgtgtgaattcaagcaagcatcaagcagatctagcaaccaacattgctaaagcttgcatgacctatggcttgcttgggcgcaacctgtttcaactatgtgaggaaatgctacaaaaggaaaattcatgcgtagaagtctgtaatgagttactttcgctttgtcccagtcatggggatcagtattctggtgttcttccgcagagcagaagataccaggtcaaaatggatctgcttacagcttctggagatctttccactgcagctattgttgaagataaagtgtgggcttccatagcaagtgaaactgcatcagctataaaatatggatctaaaggtacagtctgtacactaccaacaaacttaatgctattttttctgtcgcttttctcaaaatgcagttatgtcttccaggcaacgagctaaatgtggttcattttaccattatcaatattgatgtttatatcaatctagttaacacatatgtatgattttgtagagccatcaagcgattccaagtgttcaagtaatggtaacctgcatcctaagaaggctattgtggaattaccggtccgtgtcgactttgtcgggggttggagtgatacacctccatggagtttggagcgtccaggttgtgttttgaatatggcaatacggttggaagggaaccttccagttggtgctatgatagagacaacaatggaccaccttggagttctcattgaagatgatgctggcagaaatgtttgtattgatgacctgtcttctattacttcaccattcaaagaaaatgattcattccgtttagtcaagtctgctcttattgtgactggtgtcctaaaccatgaaagattgtcaaaattagggttgaacattaggacatgggcaaatgttcctcgtggaagtggtctgggaacttctagcatattagcagctgcggtagttaaggggctattccaacttatagaaggtgatgaaagtgatgcaactgttgctagagctgtgctggtagtagagcaagtaatgggcacaggcggtggatggcaagatcaaattggtggcctatatcctggaatcaagtgcactcagagttttccaggacagccattgcgtttgcatgttgttccattgctggcatctccgcagttgattcaagaattacaacaacgtctcctggttgtgttcactggtcaagtaagtatgaattttctgctgtaagcatatataacatagtagataaactgaaattagggctagaagtttcaatttacaaacagtagcctgttcaagttccaccatgattctaagatttgtacgtccaaacaagattccttccaagtgtgcacgcccatccattttccacattgattttgcttcaaaagagtataattttctccccaaatgaatgtatactctgcacaggtaaggcttgcccaccgggtcctgcagaaagttgtcactcgatatctccgccgtgatagcctgttgatatctagcatcaagaggcttgctgagttggcgaaaattggaagggaagccctgatgaatggtgaaatagacgagcttggtggcataatgtcggaggcctggaggctgcatcaggagctagatcctttttgcagcaacaagcttgtggacgaattgtttgcatttgctgacccttactgctgcggctacaagcttgttggagctggtgggggcggctttgcgttgatgcttggaaagaatcttaactctgccaaagaactcagacaagcactcgagaattctgccaccttcgatgtaaaggtgtacaactggaacgttgctatgacaccatgaacaagtatagaactcgcggagcatatgttttcttacttttccttctggtaaacagaagttgcatatactgctggagcctggcgtcattgtacatttgtaccgtccggttcatttattcagatatgaagtgcattatttcaacaatctaattgttcc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0115100, RefSeq:Os03g0115100