Difference between revisions of "Os03g0143000"

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(Created page with "{{JaponicaGene| GeneName = Os03g0143000| Description = SAM (and some other nucleotide) binding motif domain containing protein| Version = NM_001055471.1 GI:115450670 GeneID...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0143000|
 
GeneName = Os03g0143000|

Revision as of 19:28, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0143000

Description

SAM (and some other nucleotide) binding motif domain containing protein

Version

NM_001055471.1 GI:115450670 GeneID:4331587

Length

4668 bp

Definition

Oryza sativa Japonica Group Os03g0143000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:2358391..2363058

Sequence Coding Region

2360516..2360546,2360656..2360729,2360994..2361044,2361146..2361217,2361328..2361435
,2361580..2361684,2361935..2361967,2362054..2362167

Expression

GEO Profiles:Os03g0143000

Genome Context

<gbrowseImage1> name=NC_008396:2358391..2363058 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:2358391..2363058 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atttctgcttttctacatttgatttgtcatgcatttgaattttttactgttccatttggacagttcttcaaggatcgacactacttggataaagaatggggaaagtactttgagggtcaaggaggggggaagatggtgattttggaggttggatgtggagctggaaatacaatatttccattgatttctacataccctgatatatttgttcacgcatgtgatttttctccccgagctgttgacttggttaagaaacataaggactacagacctgaccgagtaaatgcatttgcatgcgatattacatcagagcaactaactgagaatgtacaaccttcctctgttgatgttgtaacaatgatctttatgctttctgcagttgcacccgctaaaatgcctctagttcttcagaatgttagaactgttctgaaaaatggtggccgtgtgctttttcgggactatgcttttggcgaccttgcacaggaaagacttatgtctaaaggccaacaaataagtgagaatttctatgtcagaggggatggcacggtgagtgcatgcgagcatattacttttcaaatgagtacctga</cdnaseq>

Protein Sequence

<aaseq>ISAFLHLICHAFEFFTVPFGQFFKDRHYLDKEWGKYFEGQGGGK MVILEVGCGAGNTIFPLISTYPDIFVHACDFSPRAVDLVKKHKDYRPDRVNAFACDIT SEQLTENVQPSSVDVVTMIFMLSAVAPAKMPLVLQNVRTVLKNGGRVLFRDYAFGDLA QERLMSKGQQISENFYVRGDGTVSACEHITFQMST</aaseq>

Gene Sequence

<dnaseqindica>2513..2543#2330..2403#2015..2065#1842..1913#1624..1731#1375..1479#1092..1124#892..1005#acatatggccagggaagaagaaggaaacaggaaaccctcgccgtggagcctccaaaccaagcgaagcgccatggccgccggcgagcagcagccgcagcagcagcagatctccgcctcctctacatcctccgggaggctcgtcacgcctttctggaaaggttcgcgagcgagcgagcgtgctctaagttagcccttttctcaggtgattttatcgcggcttttacagcgtgttttttctcgatgggatgcagagaagtacgagagggatgcgaggaggtactgggacatcttctacaagcgccacgaggacagggttgcgattctagtttcctcccgccctcctcttgcatgtgatttatttagctcgtgcgagagcactgttggatgtggaagattataattggcagtgtttgtgttgcaaccctttcctttggtttcgcgttgtctcagtagtttctcgctggtcttattagttgtgatccacgaattcctgggtgtttttgtgtgctggcagtggcagacagctctctgatcttcaggtgaaaacaaagtttcaagcaaatcaagaatgtgtagaccgcttcattgtactgaaaagcctagcagcagagttctaattccctatattcatgctgttttgtatcgatagcgtgttcagtttacttgttcaaattgctagctggtactgtaatggatcccagatactcaattgttgaaggaacttctttgtttatagttctggtatatctctcaatgctaacaagaaatttcgtcaatattcttggtggataaatgtggtgtcaaacaatacagtgaatctggacctctggatcaaatatgccactacaacagattgttgtttctctactgcaaatgcttatggttgcttaaatttctgcttttctacatttgatttgtcatgcatttgaattttttactgttccatttggacagttcttcaaggatcgacactacttggataaagaatggggaaagtactttgaggtaaacaactaaacataaaagcctatctttttgtaccaaatttggccataagtttcacggaactgatttaattgtgatgaaaatagggtcaaggaggggggaagatggtgattttggaggtatggcactgatttatattttaggcttgtttctgtactaactattgtatggttgattctgataatttagcttagcagaattaattcatagcattcttttggtcgaactagccaactagggaatgttcataaggcatttcagattcaactctgctcacaaccttggccaatatatctagtaaattctgttgctatttctcattcttgtttgtttgtaacatgaatgtgactggtgcaaggttgactgcaggttggatgtggagctggaaatacaatatttccattgatttctacataccctgatatatttgttcacgcatgtgatttttctccccgagctgttgacttggttaaggtatactattcctcgatggtagctgaatgattaatccatttacccagttttctcttctaataatttgccactgcaatgaaaagatgtgcaactgaggatctacaaattcattccccattttcattgattgaattttacatgcagaaacataaggactacagacctgaccgagtaaatgcatttgcatgcgatattacatcagagcaactaactgagaatgtacaaccttcctctgttgatgttgtaacaatggtaatatgctgtacttctatcattagtctatctgtaccagtcattttaacttctttatttacatctatttatagacttttgagtgtgcaaccagctaacatattaagtagatctttatgctttctgcagttgcacccgctaaaatgcctctagttcttcagaatgttagaactgttctgaaagtaagtgcccctgttacttctaagtacagtatcattattttcttttaatttcttagaaattctattgactcaaggaactaaactcatgtattatgtattagaatggtggccgtgtgctttttcgggactatgcttttggcgaccttgcacaggtatgaatatcttcctatgtgtattttgatgccttctctaaaagtaggattgtttaatttgatggcttctacaaatcttctcttttccctattcttggtgatatgattttggtttagtgcatgcaagagaagaattgtttcaaactttccatatatcagatgcaagtctcaaactgtatgaaatattcccttaggtgtttacatcatgcagcataacaatccactaatccaccatcttattgtcttgctgtaaatattttgtaggaaagacttatgtctaaaggccaacaaataagtgagaatttctatgtcagaggggatggcacggtgagtgcatggtagataatcatattctctaatggaagtttatgcacaacaaaattaacagatactttttacctataaaataaactggtggattgattctgaaatgcgggctccatgcagcgagcatattacttttcaaatgagtacctgatggatttattctcaacatgtggatttactgttgaggagatttgtgtgcacaataaacaagtcgagaaccgctcacttgacttggtgatgaacaggtgatgattatttgctttgtacagatatctctagaatatatgcaccacctgctattgagaaagcatgtatatttttttgcctacattaataatgctttcagagtaattctatcgattgcagaacacatgtactttggtagccttgccctttttaatttgctctgttctctttactgtggttatcttccttgatttcaaatatgcccccactttttttttcacaacaacgtgattatttttatatatattgcttaggaactggatccaagccacctttatccttggctcagctggtcttcaaggcccaaatggccagcacgattcccacacttgtgaagatgaaaaggataagttaactgctaatgcttctcaggagaagagcaccagtgaagaaattgacctttctgaggattttaacaatatgtttggaacttcacacaaccttgatgaggtaacttttattaatttaagctgagtgttatcctttgttgctgtgagcatcagacttgtattggagtaaaaaagttggatttcctgccacgccttattaacgagaagctagtatccattacttttgtcttatctgaatgacatatcaaaagtacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgctaatgaatatatatatatataataatgtctagattcattagcatctatatgaatatggacaatgctagaaagtcttacattgtgaaacggagggagtaatgtataatataaagtgacacagaagagagttcagtaagtttggtagtgatctaaaagagcagcatgagaaaaacaatattaaacctttaatttggtttactcgggttcgctaggtgtggattacctgcaaagaaaaaggaagaacaaaaaaaaaagcccatttgtccttttcaatccatgtcattggtaagcaatacaattacccgatgactggcaaggcatgcatccagcagcaattaactgcaggtatgcagcatatttgcattatctgtttgacattagtcactgcaggtctgcagttgcagtgggatgtcaatgcaatggcatgaaactgcagatgtgatttctctttttcaatcacaaatctggaattgtttatctttatgtttctaatatactcttgacattacaaatttgtcattgtcttgtgaagtaatttcacataatatttctctgttttgcaggctcaggtccttcggatcaaagcaaaaggtcatgacttcgaaataaaaatgctcacaaaagaacaccagcacacctgcaaattaaccggtctaatgctttgggaatcagctcaattcatgtgcagtgttctagcagagaatccttccattcttgctggcaaaagagtgctggaactgggctgtggctcggctggcatctgctcaatggttgctgctacagttgctcagtttgttgtagctactgatggagacgcagaatctctcgatcttcttagagaaaatactgcctctaacttggagcctgatttgcttaaaaagattctgatcaggaagttattttggggcgacaaagatgatctgaaggcagtcagggagctttccagcgatggagcaggttttgattgcataataggaactgacgttacctacaatcctgacgctatatttcccctcttcaagactgctagggaactaatttctaataaggattcagatgcagcccttattctttgctacattcagcgccgagttgatgaggattctatcctttctaccgcaatggcccagggtttcaggcttgtggacaagtggataaatggaattcacgagagtaatggtatcattagctcttggttctgtggtaatgatgtttgcagttctttcaggaatgcaacgctttccatactgtattttcaggtgtgagactttgatgtttagctgaatttcatgcatttcattacttggtgatttcccaccattattgtaccagatgaatggacaagttttttttgtggcaattatattattg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0143000, RefSeq:Os03g0143000