Difference between revisions of "Os03g0172000"
(Created page with "{{JaponicaGene|
GeneName = Os03g0172000|
Description = Peptidase S59, nucleoporin family protein|
Version = NM_001055651.1 GI:115451030 GeneID:4331780|
Length = 4924 bp|
...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0172000| | GeneName = Os03g0172000| | ||
Revision as of 19:29, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0172000 |
|---|---|
| Description |
Peptidase S59, nucleoporin family protein |
| Version |
NM_001055651.1 GI:115451030 GeneID:4331780 |
| Length |
4924 bp |
| Definition |
Oryza sativa Japonica Group Os03g0172000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:3837783..3842706 |
| Sequence Coding Region |
3838179..3840638,3840784..3840907,3841190..3841335,3841410..3841507,3841862..3842051 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:3837783..3842706 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:3837783..3842706 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcttccgacccggtgttccccgtgctccgccatggcgattacttcaccaagccgtcgatcgatgagctggtggagagggaggcggctgaccctggctactgcagcagggtcccggatttcgtcgtcgggagggtcgggtatgggcgaattcacttccccggtgacactgatgtgagggggatggacctgaatgggatcgttaagttcggtaggcactctgtggaggtttacaaggatgaggctagcaagccgcctttagggcaaggtcttaataagccagcagaagtgacgttgatgctgaatttgagcgtgcttccagagcctagcgctcttggggagttgcttaagtgtcaaacgagaaagcaaggcgctaggttcgtttcgttcaaccactcgagcggcaggtggaagttcgaggttgatcattttagtcgattcggtcttgtggacgaggaggaagaggatgttgtgatggatgaggtggttgttcggcagcctattgcggaagtaagagacccacctgcaaatggtcatgagctggagctttcacgttcgttgcctgctcatcttgggcttgaccctgcaaagatgcatgaaatgcggatgacgatgttctccaatgaggaaggtgatgaagatatggaggatggattcccatctgatcagagatacttcagcagtgagaagatgaatgtggattcaccgaactcaagtgctaaaggtttgaggctaaggtctctctctcctttgcatggttcttctctgaaagtcagcaggagacctggtgtaattggtaggagagaaccacaggctctgctggaatacagtgtaaattcttcagaacatggcccatcttctcatggtattcttatgtctgggcaaaacaagggatttccagtgagaatgaccaaggtggatggctttaagttgccatctgatcaggaaactcctgtggctgggaacgtatattccaattgtgttgtggatgctgctttatttatgggcaggtcatttcgtgttggttggggaccaaatggcatccttgtacattctggcagtcttgtcaatagacccggaactggtctatcttctgttattcacatagagaaagttgcaggcgacaaagttgtacgtgatgagaagaacaaaattaaggaggagctgactgatctgtgcttctcagacccgctggatctccataggaggcttcatcatgaatatctggagactgagtctgacttgtttaaattgaagcttcagaaggttgtggcaagtcgctttgtgttgccagatatttgcagatcttatattgacatcattgaaaggcagcttgaagtcagtgatttatctatgtcttctcgtgtgctgttaatgcaccaggttacagtttgggagcttattcgggtcttgttctcagaaagagcaactggtaaccagttagagcctactggtgatgaggaccaggaggggatgattttagataagaaagaaggtactgttgccatagaccttgaagcactccctttggttagaagagcagactttagcaattggttacaggacagtgtttgtcatcgggttcaaggagaggcgggctccttaaatgatgccaggtatctggaacatattattctgcttttgactggtcggcaattagacacagccacagaagttgctgcctttaggggtgatgttcgactggcaattttgctaagccaggcaggtgggtcaatgctaaatcgttctgacctttctcagcaactggatctatggaaaacaaatggtctggattttgattatattcaggaagacaggttaaagatatatgagttgctttctggtaatgtacaaggcgcgttggtagattcatcaattgactggaaacggtaccttggtttaataatgtggtatcaactatcacctgatgcatcacttgatattatcattcactcttatcaccagctccttggtgagggcaaagtcccatatcctgtacctgtatatatagatgaaggaccccttgatgagtcacttcaatggtccccaggtgaccgctttgacatatccttttatctaatgctgcttcatgcaaatcaagacgagaagtttgggatgctaaaaactatgttcagtgcattctcatcttcatatgatcccttggactaccatatgatctggcatcagtgttccattctggaagctatcggtgctttcagttcaaatgatcttcatgtgctagatttgagttttgtttaccaattattgtgtctggggaagtgccattgggctatctatgtcattctacatatgcctcatcttgatgacgccccatacatccatgagaagttgatcagggaaattttgtcacaatattgcgaatcatggagcaaggatgaaactcagagagtttatattgcagaacttggtattccagtagaatggatgcatgacgctctggctctttacaatgaatactatggagatcagcaaagcgcactggagaattatattctgtgtggcaactggaagaaagcccatacaattttcatgacatccattgctcattctttgtttctgtcatctaagcatcaagagatctgggacattacaagctctttggaggttcacaagtctgaaattgctgactgggaacttagtgctggaatatacatagacttcttcattctaagaaattctatgcaagaaaaaagtaccatggatgatccagatcaacttgagaagaaaaatgaatcatgcagcactttctttggccggttaaatgattcattgatagtctggggaagtaaattacctgttgaggcaagggcatgcttctcgaagatggcagaggagctgtgcgagctactaatgaactcccccggcgagggcttgacgccagatctctacatgggctgctttcagacgatgcttaacgctcctgtgcccgacgaccacaggtcatcctacctgcaagaggcggtctctgttttcaccgacatactttgcagggactga</cdnaseq> |
| Protein Sequence |
<aaseq>MSSDPVFPVLRHGDYFTKPSIDELVEREAADPGYCSRVPDFVVG RVGYGRIHFPGDTDVRGMDLNGIVKFGRHSVEVYKDEASKPPLGQGLNKPAEVTLMLN LSVLPEPSALGELLKCQTRKQGARFVSFNHSSGRWKFEVDHFSRFGLVDEEEEDVVMD EVVVRQPIAEVRDPPANGHELELSRSLPAHLGLDPAKMHEMRMTMFSNEEGDEDMEDG FPSDQRYFSSEKMNVDSPNSSAKGLRLRSLSPLHGSSLKVSRRPGVIGRREPQALLEY SVNSSEHGPSSHGILMSGQNKGFPVRMTKVDGFKLPSDQETPVAGNVYSNCVVDAALF MGRSFRVGWGPNGILVHSGSLVNRPGTGLSSVIHIEKVAGDKVVRDEKNKIKEELTDL CFSDPLDLHRRLHHEYLETESDLFKLKLQKVVASRFVLPDICRSYIDIIERQLEVSDL SMSSRVLLMHQVTVWELIRVLFSERATGNQLEPTGDEDQEGMILDKKEGTVAIDLEAL PLVRRADFSNWLQDSVCHRVQGEAGSLNDARYLEHIILLLTGRQLDTATEVAAFRGDV RLAILLSQAGGSMLNRSDLSQQLDLWKTNGLDFDYIQEDRLKIYELLSGNVQGALVDS SIDWKRYLGLIMWYQLSPDASLDIIIHSYHQLLGEGKVPYPVPVYIDEGPLDESLQWS PGDRFDISFYLMLLHANQDEKFGMLKTMFSAFSSSYDPLDYHMIWHQCSILEAIGAFS SNDLHVLDLSFVYQLLCLGKCHWAIYVILHMPHLDDAPYIHEKLIREILSQYCESWSK DETQRVYIAELGIPVEWMHDALALYNEYYGDQQSALENYILCGNWKKAHTIFMTSIAH SLFLSSKHQEIWDITSSLEVHKSEIADWELSAGIYIDFFILRNSMQEKSTMDDPDQLE KKNESCSTFFGRLNDSLIVWGSKLPVEARACFSKMAEELCELLMNSPGEGLTPDLYMG CFQTMLNAPVPDDHRSSYLQEAVSVFTDILCRD</aaseq> |
| Gene Sequence |
<dnaseqindica>397..2856#3002..3125#3408..3553#3628..3725#4080..4269#ggccgccgctccgctccgctcaagccgccgcctcctcctcttccccctcgcggcggctgcggcggcgtcctccccgccggcgaacctcctcgccctcgaaggtaaccgctctcctcccgtagccctcctcccctcccgaccccctgcgcagtctccgcgcggagatccacccgcagttcattccccttgttcaaatctaatccgaatctctcctcctctcgaaccccctgcagtttgttgggggattttgtttgcagcagttggtttcccaagtgaggagaagaatctgaatctggagtggtttggtggagcgaagggcttggctgcgcatgaagctatgaagtccggcggcgctagggcttgctgattctgtctcggttgcctcattggcctgccatgtcttccgacccggtgttccccgtgctccgccatggcgattacttcaccaagccgtcgatcgatgagctggtggagagggaggcggctgaccctggctactgcagcagggtcccggatttcgtcgtcgggagggtcgggtatgggcgaattcacttccccggtgacactgatgtgagggggatggacctgaatgggatcgttaagttcggtaggcactctgtggaggtttacaaggatgaggctagcaagccgcctttagggcaaggtcttaataagccagcagaagtgacgttgatgctgaatttgagcgtgcttccagagcctagcgctcttggggagttgcttaagtgtcaaacgagaaagcaaggcgctaggttcgtttcgttcaaccactcgagcggcaggtggaagttcgaggttgatcattttagtcgattcggtcttgtggacgaggaggaagaggatgttgtgatggatgaggtggttgttcggcagcctattgcggaagtaagagacccacctgcaaatggtcatgagctggagctttcacgttcgttgcctgctcatcttgggcttgaccctgcaaagatgcatgaaatgcggatgacgatgttctccaatgaggaaggtgatgaagatatggaggatggattcccatctgatcagagatacttcagcagtgagaagatgaatgtggattcaccgaactcaagtgctaaaggtttgaggctaaggtctctctctcctttgcatggttcttctctgaaagtcagcaggagacctggtgtaattggtaggagagaaccacaggctctgctggaatacagtgtaaattcttcagaacatggcccatcttctcatggtattcttatgtctgggcaaaacaagggatttccagtgagaatgaccaaggtggatggctttaagttgccatctgatcaggaaactcctgtggctgggaacgtatattccaattgtgttgtggatgctgctttatttatgggcaggtcatttcgtgttggttggggaccaaatggcatccttgtacattctggcagtcttgtcaatagacccggaactggtctatcttctgttattcacatagagaaagttgcaggcgacaaagttgtacgtgatgagaagaacaaaattaaggaggagctgactgatctgtgcttctcagacccgctggatctccataggaggcttcatcatgaatatctggagactgagtctgacttgtttaaattgaagcttcagaaggttgtggcaagtcgctttgtgttgccagatatttgcagatcttatattgacatcattgaaaggcagcttgaagtcagtgatttatctatgtcttctcgtgtgctgttaatgcaccaggttacagtttgggagcttattcgggtcttgttctcagaaagagcaactggtaaccagttagagcctactggtgatgaggaccaggaggggatgattttagataagaaagaaggtactgttgccatagaccttgaagcactccctttggttagaagagcagactttagcaattggttacaggacagtgtttgtcatcgggttcaaggagaggcgggctccttaaatgatgccaggtatctggaacatattattctgcttttgactggtcggcaattagacacagccacagaagttgctgcctttaggggtgatgttcgactggcaattttgctaagccaggcaggtgggtcaatgctaaatcgttctgacctttctcagcaactggatctatggaaaacaaatggtctggattttgattatattcaggaagacaggttaaagatatatgagttgctttctggtaatgtacaaggcgcgttggtagattcatcaattgactggaaacggtaccttggtttaataatgtggtatcaactatcacctgatgcatcacttgatattatcattcactcttatcaccagctccttggtgagggcaaagtcccatatcctgtacctgtatatatagatgaaggaccccttgatgagtcacttcaatggtccccaggtgaccgctttgacatatccttttatctaatgctgcttcatgcaaatcaagacgagaagtttgggatgctaaaaactatgttcagtgcattctcatcttcatatgatcccttggactaccatatgatctggcatcagtgttccattctggaagctatcggtgctttcagttcaaatgatcttcatgtgctagatttgagttttgtttaccaattattgtgtctggggaagtgccattgggctatctatgtcattctacatatgcctcatcttgatgacgccccatacatccatgagaagttgatcagggaaattttgtcacaatattgcgaatcatggagcaaggatgaaactcagagagtttatattgcagaacttggtattccagtagaatggatgcatgacgctctggtgagtagcaacttcgttttatacaaattttctgatagaaatgcatgtagctttaaaagtgaaatgagcattgcaaattcttaagaatgccactaccaggaaaatattgcacttcaaccttgtgtaactgattatctttatacaggctctttacaatgaatactatggagatcagcaaagcgcactggagaattatattctgtgtggcaactggaagaaagcccatacaattttcatgacatccattgctcattctttgtttctgtcatgtaagtttttcatacattactctaaacaaataggttttctaaatactctaattcagttttgcgccttgtttcctgtacataaatgtacaactatattgaccccaaaacctaataatatgaagcttcttacagatatctttgttattctgtttaaatattttttgttcatatgtttcatgaaggtgtcttatagattttttttctgcttgtgttgataaatattgcatggttgtcatcatggtatgagttttcaaccagacgttctgttaacccatttttcagctaagcatcaagagatctgggacattacaagctctttggaggttcacaagtctgaaattgctgactgggaacttagtgctggaatatacatagacttcttcattctaagaaattctatgcaagaaaaaagtaccatggatgatccagtaagtttttgttttttacagtttcaacatgttcctgaaagttgtggataacacaaccttgttttatctttcaggatcaacttgagaagaaaaatgaatcatgcagcactttctttggccggttaaatgattcattgatagtctggggaagtaaattacctgttgaggcaaggtaagatgtgattctatgttgtaacagatccagaacttgaaaagaaatcaaatatcgatctctgcgtgaaattactgccacttatttttcatgtttaaagtgaagcagcctcagtccgaacgacataacacagtgaattcgtaaccggttttgcaataagctattttcattttgccaggattatatatttcaatccaaaaccaaactatggccagtgtggaaattcatggtcattacacgatcatgcacggacaatctgactatgtctattttgagttcaacacatactggtgcattttctaggcttctttttgaatctattctcaggatttgttctcaattttgagtatgcagggcatgcttctcgaagatggcagaggagctgtgcgagctactaatgaactcccccggcgagggcttgacgccagatctctacatgggctgctttcagacgatgcttaacgctcctgtgcccgacgaccacaggtcatcctacctgcaagaggcggtctctgttttcaccgacatactttgcagggactgatgcatgattgcttgaagatccatggcattctatgatatctgcagaattgttggaagtttccctgatctatctattgggttttaacctattggttattctgatcatacacgggatctgggtgcacaagaagctcccggctgccaagtcgcaagtcagtaatacagtgaagagctccaaaagttcgtcccttgcccgagtgcagtgaggaaatgtagatcagctattgatggtgcagataactgccatgctcatcaaactcctgaagaatgtataagctgtgtgctaagctgtaccaatcaactttcagatgtgagctgtacccgtcatctttgttcgtttttgtactgtaatactgttacaacggaaagcagcaaatcgtgtacggtgtatgttgtgctgaagagctcgacgaagataaagcatccagctgggcccaattctcggcaatacatgcacgattccacccttccatggacgtgggagcaagctgcatatttctcttcttcagtcgaggtactttttcacagcttatgatgaggttatcccgaaaatactgtggtgtactttttcagagcttatgggattattccgaaaatactgaggttttacggagctgtaggcctgtaacaattgcaaggggatatttttttttctc</dnaseqindica> |
| External Link(s) |
