Difference between revisions of "Os03g0179900"
(Created page with "{{JaponicaGene|
GeneName = Os03g0179900|
Description = Similar to Avr9/Cf-9 rapidly elicited protein 44 (Fragment)|
Version = NM_001055693.1 GI:115451114 GeneID:4331824|
L...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0179900| | GeneName = Os03g0179900| | ||
Revision as of 19:29, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0179900 |
|---|---|
| Description |
Similar to Avr9/Cf-9 rapidly elicited protein 44 (Fragment) |
| Version |
NM_001055693.1 GI:115451114 GeneID:4331824 |
| Length |
6043 bp |
| Definition |
Oryza sativa Japonica Group Os03g0179900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:4165494..4171536 |
| Sequence Coding Region |
4165693..4166065,4166911..4167197,4167888..4168125,4169022..4169345,4169463..4169548 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:4165494..4171536 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:4165494..4171536 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggagttgaccggcctgacgcgggcggcggcggcggccaccgtgacgccgccggcgccgcgccggggatggggcgagctccggttcgcgccgctgctgcccggcgagcggcatgggaggaggaaggtggtggtggcggccatcagcgaggaggtgccgcggctggcggcgtcgccgtcgtcggggatcaagggcggcggggccggggagaggcggccggcgccggagaaggtggcgctgcgggcggcgctgacggtgcggcggaagcagaaggaggacatcaaggaggcggtggccggacacctcgacgcgctctgggacatggtcggccggaatgtcgtgctcgagctcatcagcaccaagatccacccaaggaccaagaagccgatgcagagtggccgtgtgtccatcaaggactggtgccagaagaggggagccaagggcgaccacgtcgtgtacacggccgagttcacggtggacgccgacttcggcgagccgggcgccatcgccgtggccaaccggcacaacagggagttcttcctggagagcatcgtcgtcgagggcggcggcctgccgtgcgggcctgtgcacttcgcctgcaactcctgggtgcagtccaccagagagctgccaacaaagagggtgttcttcagcaacaagccatatttaccttctgaaacacctcccgggcttagagaactaagggagaaggaacttaaagacctaagaggagatggcacaggtgttcggaaattatctgacagaatatatgattatgccacatacaatgatttgggaaatccagataaggggaaggaattcatcaggccgatccttggaggagagaagataccttacccacggcgttgccggactggtcgcccgccaacggataccaacatgctagcagagagcagagtagagaagccgcatccaatatatgttccccgcgatgaggcatttgaggagctgaagcagggtgccttctcatcagggaggctccgggcagtacttcacacattgatcccatcgctgattgcatccatctcagctgagacccacaatttccaaggcttccaccacatcgacaacctctataaggagggcctcaggctgaagctgggcctgcaagaacacctattccagaagataccacttgttcagaagattcaagagtcgagcgaagggatgcttcgttacgacactcctagcattctttctaaggacaagtttgcatggctccgtgacgatgagtttgctaggcaggctgttgcaggaataaacccagttaacattgagcggctgcaggttttcccaccagtgagcaagctggatcctgcaatctatggaccaccagaatcatcaattactgaaacacacatagctggacatctcaacggactcacagtacaacaggcaatggacgaagcaaagctgttcatagtggactaccatgacgcatacctgccattcttggaccggatcaatgcgatagatggacggaaagcatatgcgacccgaacaatcttcttcctgacagaagctggcacactgaaaccgatcgctatcgagcttagtcttcctccagccaagccaggggagcctcggccaagcaaggtcctgacgcctccctatgatgctacctcgaattggctctggatgcttgccaaggcccatgtcagctccaacgatgctggtgtccatcagctggtcaatcactggcttaggacgcatgcaacaatggagccgttcatcctggcggcgcaccggcatatgagcgcaatgcaccccatcttcaagctcctgcacccgcacatgcggtacacgctcgagatcaacgcgcttgcacggcagagcctcatcaacgccgacggagtgatcgagtcctgcttcacccccggccctgtctccggcgagatcagcgctgcttactaccgtaaccactggcggttcgacctggagggcctcccttccgacctcatccgcaggggagttgctgtggaggacgcgacgcagccccatggcgtcaggcttctcatcgaggactacccatacgcgaatgatgggctcctgctctggtcggcaattcgaagctgggtggagtcctacgtgcagctctactacccggacgccgggacggtgcagtgcgatcttgagctgcaggggtggtaccacgagtcgatccatgtcgggcacggcgacctccggcacgcgccgtggtggccgccgctctccacgccggtggacctggcgtccatcctgacgacgctggtctggctcgcgtcggcgcagcacgcggcgctcaacttcgggcagtacccgctgggcgggtacgtcccgaaccggccgccgctgatacggcggctgctgccggacctggagcgcgacgcggcggagtacgccgcgttcctcgccgacccgcaccgcttcttcctgaacgcgatgcccggggtgctggaggcgaccaagttcatggcggtggtggacacgctgtcgacgcactcgcccgacgaggagtacctcggcgaggggcgggacgagggcggcgtgccgtggacggcggacgaggcggccgtggcggcgcacggcatgttcgcggccgatgtgcgacgcgccgaggagaccatcgagaggcggaacgccgaccacggccggaagaaccggtgcggcgccggggtgctgccgtacgaactgctggcgcccagctcgccgccgggggtcacctgccgcggcgtgcccaacagcatctccatctga</cdnaseq> |
| Protein Sequence |
<aaseq>MELTGLTRAAAAATVTPPAPRRGWGELRFAPLLPGERHGRRKVV VAAISEEVPRLAASPSSGIKGGGAGERRPAPEKVALRAALTVRRKQKEDIKEAVAGHL DALWDMVGRNVVLELISTKIHPRTKKPMQSGRVSIKDWCQKRGAKGDHVVYTAEFTVD ADFGEPGAIAVANRHNREFFLESIVVEGGGLPCGPVHFACNSWVQSTRELPTKRVFFS NKPYLPSETPPGLRELREKELKDLRGDGTGVRKLSDRIYDYATYNDLGNPDKGKEFIR PILGGEKIPYPRRCRTGRPPTDTNMLAESRVEKPHPIYVPRDEAFEELKQGAFSSGRL RAVLHTLIPSLIASISAETHNFQGFHHIDNLYKEGLRLKLGLQEHLFQKIPLVQKIQE SSEGMLRYDTPSILSKDKFAWLRDDEFARQAVAGINPVNIERLQVFPPVSKLDPAIYG PPESSITETHIAGHLNGLTVQQAMDEAKLFIVDYHDAYLPFLDRINAIDGRKAYATRT IFFLTEAGTLKPIAIELSLPPAKPGEPRPSKVLTPPYDATSNWLWMLAKAHVSSNDAG VHQLVNHWLRTHATMEPFILAAHRHMSAMHPIFKLLHPHMRYTLEINALARQSLINAD GVIESCFTPGPVSGEISAAYYRNHWRFDLEGLPSDLIRRGVAVEDATQPHGVRLLIED YPYANDGLLLWSAIRSWVESYVQLYYPDAGTVQCDLELQGWYHESIHVGHGDLRHAPW WPPLSTPVDLASILTTLVWLASAQHAALNFGQYPLGGYVPNRPPLIRRLLPDLERDAA EYAAFLADPHRFFLNAMPGVLEATKFMAVVDTLSTHSPDEEYLGEGRDEGGVPWTADE AAVAAHGMFAADVRRAEETIERRNADHGRKNRCGAGVLPYELLAPSSPPGVTCRGVPN SISI</aaseq> |
| Gene Sequence |
<dnaseqindica>200..572#1418..1704#2395..2632#3529..3852#3970..4055#4180..4287#4371..4675#4789..5052#5162..5933#acaagacgcgacacctcccctgaatgaatgaatgaatcctactaggccagcactgctgctgcctgctgctcccaactcgacgacgccaaccacctcgcctcgcttagctcccacctaaacagtaagagcacacagcccaaaccggcgggagatccgaagcgcagccaagaacgcatcactgtcctcttcgtcttcgtgcatggagttgaccggcctgacgcgggcggcggcggcggccaccgtgacgccgccggcgccgcgccggggatggggcgagctccggttcgcgccgctgctgcccggcgagcggcatgggaggaggaaggtggtggtggcggccatcagcgaggaggtgccgcggctggcggcgtcgccgtcgtcggggatcaagggcggcggggccggggagaggcggccggcgccggagaaggtggcgctgcgggcggcgctgacggtgcggcggaagcagaaggaggacatcaaggaggcggtggccggacacctcgacgcgctctgggacatggtcggccggaatgtcgtgctcgagctcatcagcaccaagatccacccaagtaagaagaatcaagcaaagcactccattttcttgggagtaagcttttaagctagcacctcgccgagttgacttcaaatctcacctttattcgagctgtttattttagttcttctttttttggataaagtttaagcttgttttgatcgtttttctactttactgggagctggaaatgcaaagttgctagtacctttttttggcttcagctccgtttgctcctcatggtcctgggtaggtagcagatggcagtcaggggattctgattagatgcagatgatcaccagatctttataatttataatggagttagtataatgagagcatggagatggagagcatgtgtccgttgcattaggatattcacactgcatttttttccaactaccttttcatgcttacaaaagagtatccaagcaattggagctactctatatactttttaaacactgacatctttcagaaaactagaaaaatcccaagatttgcaagttggagaaaggaaataaatggaatggttattttaacagagctttctttctacctttaaatccaaagcgcccaccggaatcttcagagtacttcaatgcagagcctccccttttcatgatcacatcagaattttttgcccctttagaaaaaaaaaagcatcagaatatttcgtgactaaatggatcataactgtgcacgcaagtaaatatctttcccttgtctccatgatccgcgaaagttcttgtccctttcttgtcaatttttacatgtctccaaatttgacttgccttgccaactttcccagctctgactgagttgttgctgctgctgatgatgatgatgaatctttcacagggaccaagaagccgatgcagagtggccgtgtgtccatcaaggactggtgccagaagaggggagccaagggcgaccacgtcgtgtacacggccgagttcacggtggacgccgacttcggcgagccgggcgccatcgccgtggccaaccggcacaacagggagttcttcctggagagcatcgtcgtcgagggcggcggcctgccgtgcgggcctgtgcacttcgcctgcaactcctgggtgcagtccaccagagagctgccaacaaagagggtgttcttcagcaacaaggtactctgaacattccgttcaattatttttctttggtccaaggaaaaaaaaaaacgtgttttgaggctgtgatattatcatggctaggtgatccttacagtagtcatgttccagttaatagtgatattagtcactaagctggttgtgcatcattgtctgtgatggtgattggggaaagaaggccattaactacaaaacgaggtggcaggccagcctaaaggcatgatttttagagttactgctagtgtgtcattgtcaaaaacccgattatttggcatgatttttattgagttatgtcatgtccaaatgttgtttaatttctcagcttttagatgggtcataggcctgtcagtagaacgtatctatggcctgtccgagaacgatcttttggcactaggttaaatgaactgagtggggcaccaatgccttatgcatcttcatgtgtataatgcggtgtggtttttccagcactttcaaacaggactgtcaattctttacattttgctccaaaggaagtcaagacaactataaaagaatttaggttaggttgtgatcccacttggctgttttttggccttcaaatggtgacttgatttctttgatgagaaagtgataacaattctaaaaaaaatattcacttgaagattacgtaattcagatttctgataatatatgaatggtctcatgcagccatatttaccttctgaaacacctcccgggcttagagaactaagggagaaggaacttaaagacctaagaggagatggcacaggtgttcggaaattatctgacagaatatatgattatgccacatacaatgatttgggaaatccagataaggggaaggaattcatcaggccgatccttggaggagagaagataccttacccacggcgttgccggactggtcgcccgccaacggataccagtaagttctgtttgcacacgatccttagcggattatagagaagggaattgggtaaaaggcagaaaggtgcgtgttattttccaactataactagcacgaagcttgtgcatgtccaattccattttgatcaaagaccaggtcactttcagatgtgatagcttgccccttcaataaacaatccttcaccacgtggtttgattccttgatggtgccaggatttgacaaaagaatatgtaacttttaacttctgaataacgcttgactttatgcaagacctagaagtcatatctatccataagcaggcaaaaatctatggcgtacactccaatggggaaaaaataccgagaattgcctaattgaaacagaaaagagcagctcaagagtatcagattaggatcatggcaatttcttctgggtgaagagtcttgtcaggtactgagtattgccaatagttaggctgaaagtatatgacatatatgcccattaacaaccgggaccaatagaactatagaccttatggatggccttttctatattgtttagtctttggaatggtgttcttggactctagccacagtaccgaatacaaactggccatgcaagtcctagtgaatattaaactaatcaatataatttgacattatccctagcaattattagactctcaggactccctgtaggattgttgctgtaatgtgtttctggattactcggaacaagtttttttttttttacgagggttctaagtggttaattattacttctatttgtgtcatcaaccatgcacttcactataaagtttaaagtggtccaacgaatgcttccagataaattttggaatttcacctaatcaaacagttaaaatgtagaattaactttatgctttacctgtgtagacatgctagcagagagcagagtagagaagccgcatccaatatatgttccccgcgatgaggcatttgaggagctgaagcagggtgccttctcatcagggaggctccgggcagtacttcacacattgatcccatcgctgattgcatccatctcagctgagacccacaatttccaaggcttccaccacatcgacaacctctataaggagggcctcaggctgaagctgggcctgcaagaacacctattccagaagataccacttgttcagaagattcaagagtcgagcgaagggatgcttcgttacgacactcctagcattctttctagtaagcaatgatcattaattcgttttttacctcaagctgatttgccagcagaaaaagtttcttcgaattcaagaacccttaagaatcaccactaacaatgtctccctcattctgcagaggacaagtttgcatggctccgtgacgatgagtttgctaggcaggctgttgcaggaataaacccagttaacattgagcggctgcaggtaataagatgaaatcatgatcctcagctcagtcacagaaatttgtttttaatgttgatcaacatctgtaatccataacctgatttttggtaaaaacttaactgagataattgcctggaaataggttttcccaccagtgagcaagctggatcctgcaatctatggaccaccagaatcatcaattactgaaacacacatagctggacatctcaacggactcacagtacaacaggtaccatcattttgatgaggtcttaaatcatgtccagtagtgtccccatggttattctttctgatcacatgtcacaattgaaggcaatggacgaagcaaagctgttcatagtggactaccatgacgcatacctgccattcttggaccggatcaatgcgatagatggacggaaagcatatgcgacccgaacaatcttcttcctgacagaagctggcacactgaaaccgatcgctatcgagcttagtcttcctccagccaagccaggggagcctcggccaagcaaggtcctgacgcctccctatgatgctacctcgaattggctctggatgcttgccaaggcccatgtcagctccaacgatgctggtgtccatcagctggtcaatcactggtaaaaaaaaaaaagaacaaacatgccataatgttgtcactgctgccttgacaagaacaccaaattgtcaggtaacttctgaacattgtgactaaccgggtcctctctttcaggcttaggacgcatgcaacaatggagccgttcatcctggcggcgcaccggcatatgagcgcaatgcaccccatcttcaagctcctgcacccgcacatgcggtacacgctcgagatcaacgcgcttgcacggcagagcctcatcaacgccgacggagtgatcgagtcctgcttcacccccggccctgtctccggcgagatcagcgctgcttactaccgtaaccactggcggttcgacctggagggcctcccttccgacctcatccgcaggcaatgccctctcctccccatcaccatccatcatctgattctgaacaaacgacgaagcttttgtactttcatggtcactgacattgcctgattcgtctgcaattctcaggggagttgctgtggaggacgcgacgcagccccatggcgtcaggcttctcatcgaggactacccatacgcgaatgatgggctcctgctctggtcggcaattcgaagctgggtggagtcctacgtgcagctctactacccggacgccgggacggtgcagtgcgatcttgagctgcaggggtggtaccacgagtcgatccatgtcgggcacggcgacctccggcacgcgccgtggtggccgccgctctccacgccggtggacctggcgtccatcctgacgacgctggtctggctcgcgtcggcgcagcacgcggcgctcaacttcgggcagtacccgctgggcgggtacgtcccgaaccggccgccgctgatacggcggctgctgccggacctggagcgcgacgcggcggagtacgccgcgttcctcgccgacccgcaccgcttcttcctgaacgcgatgcccggggtgctggaggcgaccaagttcatggcggtggtggacacgctgtcgacgcactcgcccgacgaggagtacctcggcgaggggcgggacgagggcggcgtgccgtggacggcggacgaggcggccgtggcggcgcacggcatgttcgcggccgatgtgcgacgcgccgaggagaccatcgagaggcggaacgccgaccacggccggaagaaccggtgcggcgccggggtgctgccgtacgaactgctggcgcccagctcgccgccgggggtcacctgccgcggcgtgcccaacagcatctccatctgatctggcgacattgccgatccattcattcctctttgtgttctggatcaataattttagtaaaatgaatatgaaataggagtattaatcagtatccgtacccaaacgaaacc</dnaseqindica> 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| External Link(s) |
