Difference between revisions of "Os03g0198300"

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(Created page with "{{JaponicaGene| GeneName = Os03g0198300| Description = Heat shock protein DnaJ, N-terminal domain containing protein| Version = NM_001055812.1 GI:115451352 GeneID:4331953| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0198300|
 
GeneName = Os03g0198300|

Revision as of 19:30, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0198300

Description

Heat shock protein DnaJ, N-terminal domain containing protein

Version

NM_001055812.1 GI:115451352 GeneID:4331953

Length

4940 bp

Definition

Oryza sativa Japonica Group Os03g0198300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5189005..5193944

Sequence Coding Region

5189072..5189406,5189858..5190489,5190774..5191081,5191234..5191342,5191709..5191794
,5192011..5192070,5192167..5192244,5193002..5193178,5193580..5193618

Expression

GEO Profiles:Os03g0198300

Genome Context

<gbrowseImage1> name=NC_008396:5189005..5193944 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5189005..5193944 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggcggagcgcccgagcaggtccgacgtcgacttcgccgacgtcttcggcggcccgccccgccgctcgtccgggcacgacagcctgaggcgctcgtcgatggactcgtcgttcggctcagcgacgaaggggaggagcggggcagaggagaggcccgtgttcggggaccgcacgagctccgaccggaggaggcagctcgggcaggaattctacaaggacatattcgccgggagcgagtcgatgtcacctaggcggggaggcgcggcgggggatctggatgtgtttggtgcgcaggcctcacccggttccaccagccgcctgcattcgagcttctccatgaagttcaacggaggcctggacagttctgtccctacttctccatctcggcatacatccaacaaaaacgatgatggaatatcatatgcttacagtgttccaacttcacctaattcatccatgaacagctttctagcccaaggggcaccccaacaagattccacaaagaatcctttttcatggcatcgctatcccttcttatcccggtttcgctctaacagtggagataagaaggacacctcccattatgtcagctctatggacagtgaatacgaagggactcctgttagcttggaaagtagcattgccaataacaagttccatttttcattctataaatggggagggaaaggtgccgttttggtattgccaactactgcacaggaaaatgctggtgatattgttggagtaaggagtttccctcaagtgattgtgcaaggtatggacctaattgatgaagaagatagcacgtcaactgccactggagcatcaaagagtcagactgattacgaagactacaaatctgggaaagatgtctcgttaggggcactcttaaaaaccaaggatggagcccttcctttagcttttgatgactacgtgctaggcgataaatctgaagaatcaggaacaaaacataacaccaataatgcaaagaacaatgtattaggagctagccccagctctaaaagttctcggtcaccttcaggagagaaaagtcgtggcagcagagtgaaaggaaaagtaaaggacttcatgaaaatatttagtcctgagagttcaccgaagagcaaacgagatcggacatccagtgggaaaaacggaagcaaaagtggtcctgaagataaatttagcatatccaattcggaggtcgatgacaatgtcagaacagccaatatgaacaagcagaatgtgttccctcctgtaccctctccaatcagcgaagcacaagacaggacggagataccggtttttacagtggataatgaaatggattcaaaggcagattttggaagaaaagaagttacacctccctcttttgatgagtcaagcgatgcccaaacaaaatataaggtagatgagataacagatcttgcggaaggtccagtggaagatcttgaagaatgtgtggttgaggatgtctctgaagattttattcttcgtaataatgaggaaaaagagcaaataaagatttctgaatccaaaatctgggaatggtcaaagggaaaagaaggaaatattaggtcattgctttctacactacaatatgttctatggcctgagagtggatggaaaccagtcccccttgttgatataattgaaggagcagctgttaagaaggcctatcagaaggcattgttatgccttcatccagataagttgcaacaacgaggagctgctatgcatcagaagtatatagcagaaaaggtttttgacattctacaggaggcatggaaagaattcaatacagttacttttggatag</cdnaseq>

Protein Sequence

<aaseq>MAAAERPSRSDVDFADVFGGPPRRSSGHDSLRRSSMDSSFGSAT KGRSGAEERPVFGDRTSSDRRRQLGQEFYKDIFAGSESMSPRRGGAAGDLDVFGAQAS PGSTSRLHSSFSMKFNGGLDSSVPTSPSRHTSNKNDDGISYAYSVPTSPNSSMNSFLA QGAPQQDSTKNPFSWHRYPFLSRFRSNSGDKKDTSHYVSSMDSEYEGTPVSLESSIAN NKFHFSFYKWGGKGAVLVLPTTAQENAGDIVGVRSFPQVIVQGMDLIDEEDSTSTATG ASKSQTDYEDYKSGKDVSLGALLKTKDGALPLAFDDYVLGDKSEESGTKHNTNNAKNN VLGASPSSKSSRSPSGEKSRGSRVKGKVKDFMKIFSPESSPKSKRDRTSSGKNGSKSG PEDKFSISNSEVDDNVRTANMNKQNVFPPVPSPISEAQDRTEIPVFTVDNEMDSKADF GRKEVTPPSFDESSDAQTKYKVDEITDLAEGPVEDLEECVVEDVSEDFILRNNEEKEQ IKISESKIWEWSKGKEGNIRSLLSTLQYVLWPESGWKPVPLVDIIEGAAVKKAYQKAL LCLHPDKLQQRGAAMHQKYIAEKVFDILQEAWKEFNTVTFG</aaseq>

Gene Sequence

<dnaseqindica>68..402#854..1485#1770..2077#2230..2338#2705..2790#3007..3066#3163..3240#3998..4174#4576..4614#cctcgacgaccgcccgctcgaaacaatctcccgctgcgctgcggcggcgcttcgagggcagggcggcatggcggcggcggagcgcccgagcaggtccgacgtcgacttcgccgacgtcttcggcggcccgccccgccgctcgtccgggcacgacagcctgaggcgctcgtcgatggactcgtcgttcggctcagcgacgaaggggaggagcggggcagaggagaggcccgtgttcggggaccgcacgagctccgaccggaggaggcagctcgggcaggaattctacaaggacatattcgccgggagcgagtcgatgtcacctaggcggggaggcgcggcgggggatctggatgtgtttggtgcgcaggcctcacccggttccaccagccgcctgcattcgaggtactacctggcttgctacctagtttttcagtgaagtgatatgaacaattgtagtgatttgttatggaatcctctctaaccaggacaaattttgtttagcaaatgtgcccctatcctctattttgattgatttgttatggaatcctctctagccaggacaaattttgtttagcaaatgtgcccctttcctctattttgataatgataagttgattactctctagttttcaagtaactcatgattcatgaatgatgaatagttacttgtcgatcataaaacttaaatgcagagaaatgatacatttacttactattatctgatcagatgttctgaattttagttccacttagacatgcacacaactgctgattacacaacgttttgctttttttgtatgatgcattttacttccacatttgttttgattttactcatatctacgtgtttcagcttctccatgaagttcaacggaggcctggacagttctgtccctacttctccatctcggcatacatccaacaaaaacgatgatggaatatcatatgcttacagtgttccaacttcacctaattcatccatgaacagctttctagcccaaggggcaccccaacaagattccacaaagaatcctttttcatggcatcgctatcccttcttatcccggtttcgctctaacagtggagataagaaggacacctcccattatgtcagctctatggacagtgaatacgaagggactcctgttagcttggaaagtagcattgccaataacaagttccatttttcattctataaatggggagggaaaggtgccgttttggtattgccaactactgcacaggaaaatgctggtgatattgttggagtaaggagtttccctcaagtgattgtgcaaggtatggacctaattgatgaagaagatagcacgtcaactgccactggagcatcaaagagtcagactgattacgaagactacaaatctgggaaagatgtctcgttaggggcactcttaaaaaccaaggatggagcccttcctttagcttttgatgactacgtgctaggcgataaatctgaagaatcaggtgtccttttgtttagagttctgtgcacatccacatgtcattatcgaaacatattgttggtagcgttgacatcaaagctatctgttgtaaacatatttttttgggtcatttgcagtcgttaaggaaagaagagtggatagatctctttgtttttcaatcagattattttactgtcatatagaaaagagcatgtctttttgcatgaatattatgaaatcttctttgcatgtttttaatgcaattctataaataaatgtattgaagctgatgtgatttgtttgcaggaacaaaacataacaccaataatgcaaagaacaatgtattaggagctagccccagctctaaaagttctcggtcaccttcaggagagaaaagtcgtggcagcagagtgaaaggaaaagtaaaggacttcatgaaaatatttagtcctgagagttcaccgaagagcaaacgagatcggacatccagtgggaaaaacggaagcaaaagtggtcctgaagataaatttagcatatccaattcggaggtcgatgacaatgtcagaacagccaatatgaacaagcagaatgtgttccctcctgtaccctctccagtaagttgatcttagaccaggataattctctgaatactgatcaatttcttagaagtctgtttttcttttgtgagtactgtcttcaacaagataggtggttttatattagaaagaagagtacacctgttggattaatctttgacttgttccagatcagcgaagcacaagacaggacggagataccggtttttacagtggataatgaaatggattcaaaggcagattttggaagaaaagaagttacacctccctcttttgatggtaagatatgcatacctttgaatgaattaagatattttcttttcctttcttcagacaactgcagcagtaaaaccattgccatgttttgctagtcttaaaatctcacgcatgtcattcttaacctcttgatgctcgtgttaatcattcagtgactttctgctagttatatttgcaacagtcacattgaaattatgggactacggtagaattgtttattcatgttctgctagtttttttctctggaagttcctttttaagagcatgtttttgtatgcttggtgtcatcatttgttttctgaaactagtgttgcttgtgtaatattcaagaataacatatacaatatttcttcttgttctgcttactagagtcaagcgatgcccaaacaaaatataaggtagatgagataacagatcttgcggaaggtccagtggaagatcttgaagaatgtgtggtatgtcatacttgtgaagtcattatatgcttctaggtctaagcaaattcgaaaattgtctgcccattaaacagatcattgtaacccagttaatttgtcgaccaaagctgaaagctgcttccattatttgtcatttggcctttgtttcttgtttgtatacattatctgcctaaccttataattgcatatatccgtttgttttgttttataaactaggttgaggatgtctctgaagattttattcttcgtaataatgaggaaaaagagcaaataaaggtagtgcacacaacatgaattggtgtggcaacttgtcactcctttcccattacctttcttttccaattctgaactttcttgcccatttcaatgtagatttctgaatccaaaatctgggaatggtcaaagggaaaagaaggaaatattaggtcattgctttctacactacaatatgtgagtgcaagaacatcttttgcatgtgatttcatagtactccctctgtttcataatgtaagactttctagcattgcctacattcatatacattttaatgaatctagacacacacatatgtttagattcatttatatctatatgaatgtgggcgatgctagaaagtcttacattatgaaacggaggaagtatatgctatcaattgtttgcaatgaatgtgtgaggttagtcgcttttcctggggactagctaagcatgagtaagagtttttgagtaattgagatgatcgtggaatgtagcgtttggtcaagtcccctgagatatataacacatttggtcaccgccttcgagtggtttgacgagcatgtctttggttgaagttgactgacaatctattctatcgaatatctctcttactactcggcatcgtggttaatataatgaaaggtgtcaaccgtgattatggacacactaaggatgagtggctatttatgcgtgtatggatcccactcatccaaatacatgtgttggtcatgttgaacaatggacgatatatttcctggggtgcccacatatactaactcggtttctaatagcaatatttcaacttttaaacccacatttgcatccattacctcttttttctaccttttcaaaattattctattgttcctatttttgttgatcactttggagtatgatatcgtgacaactgtgcttttattcttttttgtgttaacttctcgtgcttccttaggttctatggcctgagagtggatggaaaccagtcccccttgttgatataattgaaggagcagctgttaagaaggcctatcagaaggcattgttatgccttcatccagataagttgcaacaacgaggagctgctatgcatcagaagtatatagcagaaaaggtttttgacattctacaggtactctggatttatcccaaatatttttttctgattgacaatgagttgatggcaaaaaatttgtgaagtttatggtatagttttgtagcagatctggtatcatgttgttttactgaggtttcgttttgtgttttttcccttatggaattatgctaatgtagaagtggtcctcagaattatctcaaatgctatccattaaaagtcactaacagccaagttttaagcttgtacctatttggatattaaacggattgcaggtgttatttctccttttcaagttgattttcttacaatgtaaaacacctcgtgtgattcttgtggttctcattgagagtcgagacagtgaaaaaaatcaggatttttgtaaaataatttacacaatatctccctttttttttcaggaggcatggaaagaattcaatacagttacttttggatagtattccttagatcctatcgttgttttggctctatcattcagatatggtgcttgttgttgtccactttaatgtacggatggtaatgcccaggatcacattggatatggacatggccatgggaggccatgatatgcatttttttttgaggtattgcagtcctcttgcagtctggtgaattgcactgtatgaatttgcttgcctaaatgtaagtacttagaaaaatagcagttcttgtacaaattttccggttgtggcaaataaacgggtgtatccagagtattgaaattctataaatagtgtgtgaggcctttgtgtgtgtgtgttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0198300, RefSeq:Os03g0198300