Difference between revisions of "Os03g0213800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0213800| Description = Mitochondrial substrate carrier family protein| Version = NM_001055901.1 GI:115451530 GeneID:4332049| Length = 3925 ...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0213800|
 
GeneName = Os03g0213800|

Revision as of 19:30, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0213800

Description

Mitochondrial substrate carrier family protein

Version

NM_001055901.1 GI:115451530 GeneID:4332049

Length

3925 bp

Definition

Oryza sativa Japonica Group Os03g0213800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5988129..5992053

Sequence Coding Region

5988545..5988773,5988941..5989013,5989130..5989250,5989749..5989794,5990203..5990413
,5990679..5990828,5990964..5991021,5991127..5991242,5991828..5991933

Expression

GEO Profiles:Os03g0213800

Genome Context

<gbrowseImage1> name=NC_008396:5988129..5992053 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:5988129..5992053 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcgtccccgtccgctcctcctccccccgccgccgccgctggagtcggagtctggagccctgctccgcaatcgccgtcgcccaacctcgctaacttcttcgtatggagggaatttgtatggggagcaattgcaggcgcattcggtgaaggcatgatgcatccagtcgatactctgaaaacacggcttcagagtcaggctataatcacaggggctaaggctcagaaaaatatattccagatgatcaggacagtctgggtctctgatggtctgaaaggtttttacagaggaatcagtccaggtgttactggatcacttgctacaggggcaacatattttggtgttattgaatcaaccaagacatggctggagcattctaatcctaatctaagtggccattggtctcactttattgctggaggaattggagatacacttgggtcttttatctatgtgccatgtgaagtcatgaaacagcgaatgcaagtccaaggcaccaagaaatcttgggccttaactgccacaaaaggaaatatttctcaaactccaggggctccgatgtataactactataatggaatgttccatgctggttgttctatctggagagatcatggtctgaagggactttatgcaggatactggtctacacttgccagggatgtaccttttgctggtcttatggtcactttctatgaggcaatgaaagaactgactgagtatgggaagaggaagtatttgccagagagtaatttgcatgctagcagctccttcgaagggcttcttctaggaggcttggcaggcggttttagtgcatacttgacaacccccttggatgtgatcaagacaaggctgcaagtacagggatcaacaactagttacaatgggtggctggatgctattacgaagacatgggctaatgagggaatgagtggcttgttcaaggggagcattcctagaataatatggtacatacctgcatctgcattcacgttcatggcagtggagttcctcagggatcatttcaacgaaaagatcgatacagatgcccgtgaactaaccggcctgtcaatggacacaagatcagaagttgaggaagctgcatga</cdnaseq>

Protein Sequence

<aaseq>MAASPSAPPPPAAAAGVGVWSPAPQSPSPNLANFFVWREFVWGA IAGAFGEGMMHPVDTLKTRLQSQAIITGAKAQKNIFQMIRTVWVSDGLKGFYRGISPG VTGSLATGATYFGVIESTKTWLEHSNPNLSGHWSHFIAGGIGDTLGSFIYVPCEVMKQ RMQVQGTKKSWALTATKGNISQTPGAPMYNYYNGMFHAGCSIWRDHGLKGLYAGYWST LARDVPFAGLMVTFYEAMKELTEYGKRKYLPESNLHASSSFEGLLLGGLAGGFSAYLT TPLDVIKTRLQVQGSTTSYNGWLDAITKTWANEGMSGLFKGSIPRIIWYIPASAFTFM AVEFLRDHFNEKIDTDARELTGLSMDTRSEVEEAA</aaseq>

Gene Sequence

<dnaseqindica>3281..3509#3041..3113#2804..2924#2260..2305#1641..1851#1226..1375#1033..1090#812..927#121..226#acgagcccagcttgggcgaagccaagcaggcaagcatccatcatccatggcgcgccgttcaaaaccctaaaccctgaggcgaacctcgaggaatcgcagcggcgcgtcgtgtcggcacccatggcggcgtccccgtccgctcctcctccccccgccgccgccgctggagtcggagtctggagccctgctccgcaatcgccgtcgcccaacctcgctaacttcttcggtaagtgcttctcgctcgtttcattgcttcatcgcacggtggcatcggctccactagcctcagctaaaatccattgtcgcgatttgggggctaggagagacgggcatgggatggagaggtctcacagtggcattaaaaatgacttcgatctgatcaatgatgtgaaccatctcttgttctgttccttgcagaagaagagtgctgtttatgaactcctagcaagttacctgtgcatatttgtatgttttggcagttagcgtagcattgaactgtcattcagtaaatgcaatatgaatggacacacctctcttcagatttgagcttggacattgattcaccctattctcttagcccactcaattaggccaacaaatagttcagagttctgataacaggttatagatttcaattactctgtgacatatcatggtttaatttcatcaatttctttgcactttcaagtttcaacagcaaactatgtgataacttgtattagggttttacacttttactgcatctgggcaatgcattttccagaagagaaacatgcattagattattgctaagataaaccctgtaatgcagtatggagggaatttgtatggggagcaattgcaggcgcattcggtgaaggcatgatgcatccagtcgatactctgaaaacacggcttcagagtcaggctataatcacaggggctaaggtatgagatagtttactttacatgtgcacggacagtaatgtttcttgctgcaattcgtgatttgatacatggatactgcatccttcttttctttgtgctgagcaggctcagaaaaatatattccagatgatcaggacagtctgggtctctgatggtctgaaaggttagccattctctgttgtttgtttactaaacaaaggaaaaacaacatgaagcaactttgtattagctctgaccaaaaccagttacttcgtatcagcagcaatcttgatgaaattcaatactcacccattttcaggtttttacagaggaatcagtccaggtgttactggatcacttgctacaggggcaacatattttggtgttattgaatcaaccaagacatggctggagcattctaatcctaatctaagtggccattggtctcactttattgctggaggaattggtgggtagctattttcttatgtctcttgaatgtttagtattgtaaatatttatgacgttacctaaacttttttatactaggttttatcaactgtgatcaatatttatttttagaagtatgccctttttttccacgcaatgtaaacatttctggctgatggaattttgccttctcattggaatttcgctgctggaaatttgccttctgattggaatgcatggaactcgagaaaaattcttatgccgcttcattgtgctcattgcaggagatacacttgggtcttttatctatgtgccatgtgaagtcatgaaacagcgaatgcaagtccaaggcaccaagaaatcttgggccttaactgccacaaaaggaaatatttctcaaactccaggggctccgatgtataactactataatggaatgttccatgctggttgttctatctggagagatcatggtctgaagggactttatgcagggtattggcactgtttgcttgttgctagcatgcctatcgttattgatagtgcgtttcatctatttatagtggaggggaagcttttgttttaatgaattattattttctagacactctaaaatcacatccattgaaatatgctagaaaactatttctgctcgaatactgattattgaattatgctcgaatactatttctcaacctttgaatacaattattgatcattaaaaactacattttatatacacatttctggacgcgtaagtgtacagttgttgattgaacaaacctactatcagtacagtttgtatgtaaagagacaaactgatactatcccttgcgtgatgataggctagttatcattcatttcctttttctttaaactgacacaatcttttgtcatacacagatactggtctacacttgccagggatgtaccttttgctggtcttatggtaagtgagaaattcagcttgcacttttttctcattgttctagtaattttaatatacattttcatatctcaaagcaataggtttggggccctcctccttcatgcagtaggcatgtcttaagagctaaatactgaccacaacatggcagcctcaagcatatgaatttttaaaatttggccaggtctcatcccagattgcacatgtcttgataaataaatatgttttgctagagggctgtcttcactctttagtagctttcgactattagagttcggatttgaattgagcctttgagctcctgtaccctacctgttctatcttctatgcataattatctctaccatgaccctaattcttgtagatattcatttcagcttacagtctgattttattgacagatctacgcatgtaatgtacactttaagattccttagctgcagacagtaagagagttcctttttatccttttttgatgagcatgatcttttgcattttcaggtcactttctatgaggcaatgaaagaactgactgagtatgggaagaggaagtatttgccagagagtaatttgcatgctagcagctccttcgaagggcttcttctaggaggcttggcaggcggtaggtctggtccaattttgttaatacaccaaatgttgcctatagtattacttgattatccgaaaatgcttaggtctcttgatatttacttattttccaatgtttttctatgtcaggttttagtgcatacttgacaacccccttggatgtgatcaagacaaggctgcaagtacagggatcaacaactaggtaactggaaaatctcacctatctctccttttctgctaggccaatatgacagtcatgaaatgaacttttatgataactgcgatatccaatttatactctcccaaatcgtcacacgcgtcattttgctgtttgacaaggtactgattattcttttgtttgttaatcagttacaatgggtggctggatgctattacgaagacatgggctaatgagggaatgagtggcttgttcaaggggagcattcctagaataatatggtacatacctgcatctgcattcacgttcatggcagtggagttcctcagggatcatttcaacgaaaagatcgatacagatgcccgtgaactaaccggcctgtcaatggacacaagatcagaagttgaggaagctgcatgaagccctgaaggcctgaagtagttccctgttttgtaggactgatccagaggaatttctgatttctccgtcaagtaaagttcatttcacgaatataagtgtgaaaaatgcaatgtcagccaagtttcaacgtttacaagcgtagaagagataaggaaactgatcatccttcatctactcagtatttttttgggggtgttggaaaccaggattgttggtgggcagtagttcttctgggtcttcaaagcccatgtttggacctaactgatgcaccccaaattccataccatatgtaccttccaacattttgttctatccaaatgcaattacaacgtagttcttttttttattattatttttaatgaacgagccggcactagaatgtatcaattccattgaatagagcacgagtacaacgc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0213800, RefSeq:Os03g0213800