Difference between revisions of "Os03g0219700"

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(Created page with "{{JaponicaGene| GeneName = Os03g0219700| Description = DEAD/DEAH box helicase, N-terminal domain containing protein| Version = NM_001055938.1 GI:115451604 GeneID:4332087| ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0219700|
 
GeneName = Os03g0219700|

Revision as of 19:31, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0219700

Description

DEAD/DEAH box helicase, N-terminal domain containing protein

Version

NM_001055938.1 GI:115451604 GeneID:4332087

Length

2409 bp

Definition

Oryza sativa Japonica Group Os03g0219700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:6313349..6315757

Sequence Coding Region

6313501..6315222

Expression

GEO Profiles:Os03g0219700

Genome Context

<gbrowseImage1> name=NC_008396:6313349..6315757 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:6313349..6315757 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggctaactgttggccaagtgcatcgacatgtgcttgcattggcatcttcgcgatcatgcttcgtcctcggtgacaacctcccattgagaatgctttcattaccacgagcggttagatttcaccagaccgcttggcttggtactgaaacagtacaagataagagtgcttcactaactctagctagtcttgaagggcaaaacaaagttgaatatggtaagaaagaaaaagcaacacgcattggaggtccaaagccgtcttcaagggcttctgctcttaaggtgaaaccaaaagtttcttcatttaattccaaaccagcaaagagcaccttaccgaaatcagcagtagtgaagaagactctgaagatagatgaatctcttttctctgcaaaatcatttgaagagcttggtttgccgcctttgcttatagatcggttgaacaaggaaggtctaagtactccaactgaggtccagtctgctgctattcctatcatttcacaaaagcatgatgcagttatccagtcatatacgggctcagggaagacactcgcttaccttctccctattctttctgaaataggccccctaaagaggcctacagaacaagatggttctgataagagatcaggtgtagaggcagttattgttgctccttccagagaattaggaatgcagatagtgcgagaagtggagaagattttgggccctaatgataagaggcttgtccaacaacttgttggtggggctaatcgttcgaggcaggaagaagcattgaaaaagaacaagccacttattgttgtgggaacacctggtcgtatttctgaaatttcagcagggggcaagctacacacccatggttgccgctttcttgtactggatgaggttgaccagcttttgtctttcaattatcgtgaagatatgcatagaatacttgaacatgtaggaaggaaatctggtacttcatctagagatattcttggccctcttgcaaggcggtctgagcgccagactatcttggtttctgcaacaataccgttttcagttatacgagcagccaggagttggggtcacgatccagtccttgttagagctatgagtgttgttccacttgattcaattactgttccaagacctgtgctgtcccagacagatgccaaccccaactctccatcaaattcagtgaatcaagctgcagttaacagcttaccaccatctttggaacattactattgtatatccaaggctcaacacaaagttgacactttgaggagatgtatccatgctctggaagctcagacagttattgcatttatgaacaacaccaagccattgaaagatgttgtatttaagttggaggcccgtgggatgaaagctactgagctacatggagatcttggaaagcttgcaagatcaactgtgctgaaaaagttcaaggatggtgaattcagagttctagttacaaatgagttgtctgccagaggactggacgtgccagaatgtgatcttgtgattaatctggatcttccaacagactctacacactatgcccacagagctggccgaacgggccgtctagggcggaaaggaactgtggtcacaatatgcgaagaaactgaaacatttgttgtaagaaaaatgcgcaagcaattagctgtacccatcaagccatgcgaattcacggaaggcaagttgcttgttcataatgaggaagatgtagaataa</cdnaseq>

Protein Sequence

<aaseq>MRLTVGQVHRHVLALASSRSCFVLGDNLPLRMLSLPRAVRFHQT AWLGTETVQDKSASLTLASLEGQNKVEYGKKEKATRIGGPKPSSRASALKVKPKVSSF NSKPAKSTLPKSAVVKKTLKIDESLFSAKSFEELGLPPLLIDRLNKEGLSTPTEVQSA AIPIISQKHDAVIQSYTGSGKTLAYLLPILSEIGPLKRPTEQDGSDKRSGVEAVIVAP SRELGMQIVREVEKILGPNDKRLVQQLVGGANRSRQEEALKKNKPLIVVGTPGRISEI SAGGKLHTHGCRFLVLDEVDQLLSFNYREDMHRILEHVGRKSGTSSRDILGPLARRSE RQTILVSATIPFSVIRAARSWGHDPVLVRAMSVVPLDSITVPRPVLSQTDANPNSPSN SVNQAAVNSLPPSLEHYYCISKAQHKVDTLRRCIHALEAQTVIAFMNNTKPLKDVVFK LEARGMKATELHGDLGKLARSTVLKKFKDGEFRVLVTNELSARGLDVPECDLVINLDL PTDSTHYAHRAGRTGRLGRKGTVVTICEETETFVVRKMRKQLAVPIKPCEFTEGKLLV HNEEDVE</aaseq>

Gene Sequence

<dnaseqindica>536..2257#ggcttcaggctaactaagccctaaacccgcgtgtctcctccctcctcgcgagttcgccggccgcctcgcctgcgtcgatctccagtgggcagcggcgccggcgtctgctgcttccgccgcatcctcgcccgctggtgagcaccccacccgttacgcgcatcctctttctcatctctcactaacccacactttttttcccctccgatttgcgttggccctagcttctcttctagatctgtaggttgcctttctctttacctttttgccttaaccttagcacgaataacaatttagtttgttcccaagaaaatttgggggttcaaccgagtttaacacgattgatgccaccgatactccacagacttcttgcgtctaactttgttttactattgcaagttgtgaatgctgcagtttacatgattcaattgtttggttctttgcacagccaagagcacccccggtgaatttgcgagatcagttgggagtaaggacatttcggctgctgtaaaattggttttcataagcagagcagcagatgaggctaactgttggccaagtgcatcgacatgtgcttgcattggcatcttcgcgatcatgcttcgtcctcggtgacaacctcccattgagaatgctttcattaccacgagcggttagatttcaccagaccgcttggcttggtactgaaacagtacaagataagagtgcttcactaactctagctagtcttgaagggcaaaacaaagttgaatatggtaagaaagaaaaagcaacacgcattggaggtccaaagccgtcttcaagggcttctgctcttaaggtgaaaccaaaagtttcttcatttaattccaaaccagcaaagagcaccttaccgaaatcagcagtagtgaagaagactctgaagatagatgaatctcttttctctgcaaaatcatttgaagagcttggtttgccgcctttgcttatagatcggttgaacaaggaaggtctaagtactccaactgaggtccagtctgctgctattcctatcatttcacaaaagcatgatgcagttatccagtcatatacgggctcagggaagacactcgcttaccttctccctattctttctgaaataggccccctaaagaggcctacagaacaagatggttctgataagagatcaggtgtagaggcagttattgttgctccttccagagaattaggaatgcagatagtgcgagaagtggagaagattttgggccctaatgataagaggcttgtccaacaacttgttggtggggctaatcgttcgaggcaggaagaagcattgaaaaagaacaagccacttattgttgtgggaacacctggtcgtatttctgaaatttcagcagggggcaagctacacacccatggttgccgctttcttgtactggatgaggttgaccagcttttgtctttcaattatcgtgaagatatgcatagaatacttgaacatgtaggaaggaaatctggtacttcatctagagatattcttggccctcttgcaaggcggtctgagcgccagactatcttggtttctgcaacaataccgttttcagttatacgagcagccaggagttggggtcacgatccagtccttgttagagctatgagtgttgttccacttgattcaattactgttccaagacctgtgctgtcccagacagatgccaaccccaactctccatcaaattcagtgaatcaagctgcagttaacagcttaccaccatctttggaacattactattgtatatccaaggctcaacacaaagttgacactttgaggagatgtatccatgctctggaagctcagacagttattgcatttatgaacaacaccaagccattgaaagatgttgtatttaagttggaggcccgtgggatgaaagctactgagctacatggagatcttggaaagcttgcaagatcaactgtgctgaaaaagttcaaggatggtgaattcagagttctagttacaaatgagttgtctgccagaggactggacgtgccagaatgtgatcttgtgattaatctggatcttccaacagactctacacactatgcccacagagctggccgaacgggccgtctagggcggaaaggaactgtggtcacaatatgcgaagaaactgaaacatttgttgtaagaaaaatgcgcaagcaattagctgtacccatcaagccatgcgaattcacggaaggcaagttgcttgttcataatgaggaagatgtagaataagctctgcattgtcgaaatgacatttaatgtcttgaagtgttatttgtgtatgggcatttctcatagattgtattatcttaaaatgttatcaaccgatgtttttttgctcgatacaaatattcagataaatgggaatagttgtctttcctggg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0219700, RefSeq:Os03g0219700