Difference between revisions of "Os03g0248000"
(Created page with "{{JaponicaGene|
GeneName = Os03g0248000|
Description = Autophagy protein Apg9 family protein|
Version = NM_001056088.1 GI:115451904 GeneID:4332250|
Length = 7415 bp|
Defi...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0248000| | GeneName = Os03g0248000| | ||
Revision as of 19:32, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0248000 |
|---|---|
| Description |
Autophagy protein Apg9 family protein |
| Version |
NM_001056088.1 GI:115451904 GeneID:4332250 |
| Length |
7415 bp |
| Definition |
Oryza sativa Japonica Group Os03g0248000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:7870564..7877978 |
| Sequence Coding Region |
7870788..7871730,7873120..7873230,7873330..7873400,7873475..7873552,7874457..7874663 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:7870564..7877978 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:7870564..7877978 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgatgtccttccgttcgaaggacagaaatgtgcaaccacgatttaattggccatggagaagcgaatcaccattatcagcacaactgctcattgatattccacctgaaatagagttatcggactacagaaggttgccaggttcaggaagcgagagcccatctggacttctccatggtgaaggcttcaaggacgaaccaattgctgacttggatattttctttgaaaggctttatgaatatttctgtgcaaaagggctacgatgcattgttaccaaatggataattgagatgcttaacgtactttttatggtatgctgtattgggttctttttcttaattgttgattggaatgccctcggccatttgaaatgtggtgtagaggcactcgaatccggggaaaaaccatgtgatctaatgcaagtcgttaagcataatccattagttccattcacatttcctaaaatgatcactattggatcaatggttatattgacaacttacggtcttatcaacttcctcaagtttttcgtgcaactcagaagtacattgaatattcgtgacttctactgtaacagtctgaaaattacagatcttgagatccaaaccatctcatggcccaaaataattgagaaggttgtcctgctacagaaatctcagaaactttgtgttgtaagggacctctcggagcatgatattatcatgagaataatgaggaaagaaaattacttgattgggatggtcaataaaggcattatctcatttccaattcgtccttgggtacctggagctggaccaactgtcaaatcccatttgcaaaacaggagaaaccatctgatactcccgaaagccctagaatggacattaaattggtgcatcttccaaagtatgtttgatagtaaattctgtgttcggaaagattttctaacaagcccagctgtgttaaagaagcgacttgtatttgtgggcatttcaatgcttatcctttcaccctgccttgtaatattcccattagtgtacctcattctgagacatgctgaagaaatttataatcaccccagtacagcttcatctagaagatggtcaaacttatcaaggtggatttttagagagtataatgaggtagatcatttcttcagacataggatgaacaacagcgctgtgcactctttaaattacctgaagcaatttccaactccactgatttctataatggcaaaattcatatcttttgtttctggtggtttggctggtgctcttataatcattggatttctgggtgaatctgttcttgagggccatatctttggaagaaatctattctggtatactattgtttttggaacaatagctgccataagtcgaaaagtagtggctgatgaacttcaagtaattgacccagaaggcgctatgtgcaatgttgtccaacaaacgcattatatgcctaagaggtggcgtggtaaagaggacagtgaagtggtgcgaagagaattcgaaacactatttcagtttaccatagtaatgctgcttgaagagatggcctccattttcatctctccttacttgctcatctttgaggtaccaaagcgtgttgatgatattctgcgattcatctcagacttcacgatttatgtagatggggtgggagatgtgtgcagcctaagcttgtttgacttcagaagacatggaaatagaaactatgcttcaccatttgatgcacttaaaacgcttaggagctcccaagggaaaatggagaaatcatttttaagttttcaaagtgtgtatccatcatgggaaccaaatgcagaaggcaaacaattcttaactaacctccaaaagttcaaggaaaagcaaatacggcagcaggctcttgcacaatatcaagcaatggaagcatcaggctttgtggcaagcaccagaggtcacagggatgatatcttccaccaactactccctagtgatatccataaccgtgctgaggccatctcacctgctgtttacaatttgggcccgttaggattgcttgacacagatcaaagaagtcatccatatattctggattggtactacgtctgccatccacctcacttggatagaaccgaggctccttatttcaacgaagtgttccctgagaccagtgagaacacaggttcagcagcatttaaagcatctgaaattgaagaagcaaggggctgggactctgatatggttcccccgcctcgagcagatcgcgatgagtggaactttaaccatgaaagggttcgaagccatatggatgcatcgacatcaagcaatttgtttcatcatgctccagtagaacaccatgataccaaaggaaatattatcgattggtgggatcaagcacctgaacattctactggtcaacaaggaagttttctggagcctccggaatttggaaatcgatatgttgctggtaaccgttccagttatcactctggtgatgtgtctgatggaagtgtggaagagcttgagcgaagctataacagaagtagcagcagctggagaagacctcaagatttgtccactacaaggtatatggacgactctgacattgaggaagggttgaatcttccttttgctgatctcccgcagaaggatgaagatgctcgacatggcacatctgatactaatgaccccacgccagtcggccttcctgtaagaataattcctagaagcagtgaccctgtttag</cdnaseq> |
| Protein Sequence |
<aaseq>MMSFRSKDRNVQPRFNWPWRSESPLSAQLLIDIPPEIELSDYRR LPGSGSESPSGLLHGEGFKDEPIADLDIFFERLYEYFCAKGLRCIVTKWIIEMLNVLF MVCCIGFFFLIVDWNALGHLKCGVEALESGEKPCDLMQVVKHNPLVPFTFPKMITIGS MVILTTYGLINFLKFFVQLRSTLNIRDFYCNSLKITDLEIQTISWPKIIEKVVLLQKS QKLCVVRDLSEHDIIMRIMRKENYLIGMVNKGIISFPIRPWVPGAGPTVKSHLQNRRN HLILPKALEWTLNWCIFQSMFDSKFCVRKDFLTSPAVLKKRLVFVGISMLILSPCLVI FPLVYLILRHAEEIYNHPSTASSRRWSNLSRWIFREYNEVDHFFRHRMNNSAVHSLNY LKQFPTPLISIMAKFISFVSGGLAGALIIIGFLGESVLEGHIFGRNLFWYTIVFGTIA AISRKVVADELQVIDPEGAMCNVVQQTHYMPKRWRGKEDSEVVRREFETLFQFTIVML LEEMASIFISPYLLIFEVPKRVDDILRFISDFTIYVDGVGDVCSLSLFDFRRHGNRNY ASPFDALKTLRSSQGKMEKSFLSFQSVYPSWEPNAEGKQFLTNLQKFKEKQIRQQALA QYQAMEASGFVASTRGHRDDIFHQLLPSDIHNRAEAISPAVYNLGPLGLLDTDQRSHP YILDWYYVCHPPHLDRTEAPYFNEVFPETSENTGSAAFKASEIEEARGWDSDMVPPPR ADRDEWNFNHERVRSHMDASTSSNLFHHAPVEHHDTKGNIIDWWDQAPEHSTGQQGSF LEPPEFGNRYVAGNRSSYHSGDVSDGSVEELERSYNRSSSSWRRPQDLSTTRYMDDSD IEEGLNLPFADLPQKDEDARHGTSDTNDPTPVGLPVRIIPRSSDPV</aaseq> |
| Gene Sequence |
<dnaseqindica>6249..7191#4749..4859#4579..4649#4427..4504#3316..3522#3040..3219#2615..2837#1633..1953#974..1548#attctgtccccgatcccgtcacgtctcctggaaacaccccacccgcttctcgtctcctcgtctcctcgttcgtctctcgcctcgtcttccccgtcctccgcgcgattccccaaccctccccgaagccgcagtccaccgcaagtcgcctgcctcctccgccccgcgccccctccccccgtgcgccggcgatcgccggtgcccgccaggtcggtggagtctattgctctctctctctctctctctccccccattccttccgcgccgctttcgtgctgattttttttagctttggatgaacgagttttcgttttggtgttaggcgttattgggatgagaaatctagggtttggaacggcggtgtgcggaggtgggttgggtgttggtggggagaggtttggctagaagttagctcaactggttgttaagtagatagccgtgaggtccgtgcgggacaccgaattgctttccgtggaggcgacacagacgatgtgaatggtgatatgtactgcgcgattacgtttcggctgcagttgattgatcaattcgtcaacatttctgagcaaaatccgtttcatcattaggaatgaattcatttggcatcacattgctgctgcctctggaaatggaggcactaccctggttggcatctagtgcatgtataggataagttcgtttttagccttattatccatggtgccttttcggtttacctgcgttaagcttgttcataattttgtttaggctcagattgtatgaaaaaggtagctgtatatagacgtacaagtaagagcgttagctcagtttcttcttagctcccatacttgtgagtttttacacacatacattttgttgtacttgctggaaattgctggtatgcaaagtgtgattcattgaattccttttggttttggtgacaggttatttcttgtggcatggcaaggatacatattggtcttggcttgttctttcatgaatgatgtccttccgttcgaaggacagaaatgtgcaaccacgatttaattggccatggagaagcgaatcaccattatcagcacaactgctcattgatattccacctgaaatagagttatcggactacagaaggttgccaggttcaggaagcgagagcccatctggacttctccatggtgaaggcttcaaggacgaaccaattgctgacttggatattttctttgaaaggctttatgaatatttctgtgcaaaagggctacgatgcattgttaccaaatggataattgagatgcttaacgtactttttatggtatgctgtattgggttctttttcttaattgttgattggaatgccctcggccatttgaaatgtggtgtagaggcactcgaatccggggaaaaaccatgtgatctaatgcaagtcgttaagcataatccattagttccattcacatttcctaaaatgatcactattggatcaatggttatattgacaacttacggtcttatcaacttcctcaagtttttcgtgcaactcagaagtacattgaatattcgtgacttctactgtaacaggtaacatttctgattaatatgtgtgtttatagctcagtgcaatcatcaatgactgaatccaccttctcttttctttttgtgtagtctgaaaattacagatcttgagatccaaaccatctcatggcccaaaataattgagaaggttgtcctgctacagaaatctcagaaactttgtgttgtaagggacctctcggagcatgatattatcatgagaataatgaggaaagaaaattacttgattgggatggtcaataaaggcattatctcatttccaattcgtccttgggtacctggagctggaccaactgtcaaatcccatttgcaaaacaggagaaaccatctgatactcccgaaagccctagaatggacattaaattggtgcatcttccaaagtatgtttgataggtaaggaagtctgtagctctgttacttttaactagctaacattggattattcggccaaagtattttgataacatttgtttggcaaatactctgctgtcaacataatgaatctaggtatctttttcttccacattaatcctgcgtttgggagaaagcgggtgaagacacccttaagttgtcatgtaataacacttaattgcacaagagagtgcaaatgtccctaccaatctttatcattctcttttgttatacattatgttcaatctgtgtggaatacagaattgttgatgttatgcataattgtctctagctagctggttactaaattctaaacatcttaactcaagctttactgctttactgattttctgatgacttcatagagatatcgagtaatttagatattcaatctgtgtaaaagctggatgcttttcttcacccccatctattcccatcaaacagctcttatgtggattttgcacaatagcacctaaagacgtatttgtgctaagataccctcccagcttccagtttgtacaacatccgctgaaaccttctagcaagagctcgcacatcgcattgggatgttccacgatttttttgtgtgtgtagttttaacctctaaaactatactgaaagccaatatcattttcttctgcagtaaattctgtgttcggaaagattttctaacaagcccagctgtgttaaagaagcgacttgtatttgtgggcatttcaatgcttatcctttcaccctgccttgtaatattcccattagtgtacctcattctgagacatgctgaagaaatttataatcaccccagtacagcttcatctagaagatggtcaaacttatcaaggtggatttttagagagtataatgaggtaccttcttttgcagagatattattactattatgatgcagtcattgtcctgtccagtatttcttctaaatgcctgccatgtgcttactgtattatattaactgcaagctctgccatttgttgaggcctatagatactatcatgctatgcaatcagccttgtttttcttcgtctaaagctcagttgcttacaataatttcaggtagatcatttcttcagacataggatgaacaacagcgctgtgcactctttaaattacctgaagcaatttccaactccactgatttctataatggcaaaattcatatcttttgtttctggtggtttggctggtgctcttataatcattggatttctgggtgaatctgttcttgagggccatgtaagttatttcttccactttttctcatttgctattacacatttacacatgtcttattgacctactaaatctcacatacattcatatcttctgaagatctttggaagaaatctattctggtatactattgtttttggaacaatagctgccataagtcgaaaagtagtggctgatgaacttcaagtaattgacccagaaggcgctatgtgcaatgttgtccaacaaacgcattatatgcctaagaggtggcgtggtaaagaggacagtgaagtggtgcgaagagaattcgaaacactatttcaggtattttatcagttcgagagaattttgcatataccatatataatcaattagatatttagtgttctgtatactgtactacttggctttggaacttcaaccatcaccatcatcaaattttctagttatttgtgattctgctctttatttttttgtcattgaaagaactgcgcaaatgctctgggctgatgtccacataatcttatttgaacaaaattgtacaaatgcaaggtgcgcacacaaaagtacacgaaaaaaaggtggtttggcaaagagttgactgagagaattgtgcaatgtgcatataccgtactgaatcaactaatcaacatacttacttgtcctatgtgctgtacaatttggctttggaatgtcaccaatcactatcattcattttgtcagcactcatcgtctttctttattgagagaactatgaaaggttgtatgttgatctcaacagaatgttattcaacaaaattgtacaagtgcaatgcccaccttagagaagtacatgaaaaagtgacggcccaactaagttacatcgcagtaacgctgacaatcgtaaactcatttgatattaaagttgttcgtggccactgggtgattcagcagttgcatttttaaatgagtctcacttgcttattttgctaggtgaatctggaaataatagtgttcaaattctctgatagaactaatgacaaagcttggcattttctagttgttttatattgctttcagttaaagcgctatatctgaagatgaaaagaaaatgagtttctctttgtttaagtgctttgcagtctagatatcagtaccttacatttgtatcttggttgatttacgtttaatactctattgtccatatcatattgctctgaattttaactaagtaattttacaaatgcagtttaccatagtaatgctgcttgaagagatggcctccattttcatctctccttacttgctcatctttgaggtaccaaaggtaatgttctgaacttgctcaacaacagtgttttttctaaagttctttgacagtgaactccttttattatacagcgtgttgatgatattctgcgattcatctcagacttcacgatttatgtagatggggtgggagatgtgtgcaggttctctcttgatgtttcttaagaaatgaattttgttatcatatattgccactgggtttttaaaacatttaacatcatttattctctgtgtttcaatagcctaagcttgtttgacttcagaagacatggaaatagaaactatgcttcaccatttgatgcacttaaaacgcttaggagctcccaagggaaaatggagaaatcatttttaaggtacatttaatttcaagtttgaattacttcatgtgtttcttactagctattatattgtactcatattgttattaaaaagatatcttaagggccatcatttgtttattgaaatggctttggtgtactttagtagttcttggctctgaggttgtactgtggtatgatttgcacgctattgttatttcatactcttgttcaaactaggggggtattttagttctatgaacattttacgaggaaatgtgttagtttgtctatgtagtttgcccatgtcaacagcatagtgcatatggtctagactgtacaagtcaacattaactatggatatatgatgaaaatatttctcagaaaatcacaacaaatgtgtttccagcatttaattgaatttaccagagtattatttgagtatactgttttgtccataaatatggccaaagctgaacacttgaccatgatacttttttgggtgtcttcttgtcagcactatagactctgtagaatataggcactacggtgctgccctcgtcacatcatattccaagaaagcgacatccatttttggtttagtactttagtccaccatgtacattgcattttcaagagtgaataacagaataagcaaagttgtactccaagtttcacttgaggcttaatttggtccttgacgtttcagtccgtccatattagaccattagtccttcatgttttcattttagttcaaactcatcgttggacccacttgtgaagacatatagctaaatctaattagcatctctcttgataaatgactattattccctaatttcacatgtataagaaaaaggaaaagaaaaagacaaatatgtactatttggccagtgaacctgtttctcaagacccctccaatacccaatggttgtgtgctgtttttttttttctgttgaaatttgtgtacaatgagttctcttagataagggatattttgtaatagaaatgttgacttattattggctaatcaagtgggtgcaagtatgatttcgaaccaaaacgaatacttagaggacctgtgtggacaaaatagaacttaaaggaccaaattgagcctctggtggaactttagggactagattagctatccacccaacttccaactgtatgcaatgtgccctgctgttgtcctacaggcctaatggatactggccactttgtactatgtatagttaggaggttttagttagtcacaagtgttgcagccaagggtagatccaggcgtaggacacaacgcccttgtaattggttgttaccaattgcaaaattcgaagatacaaatggcctagcttaatacaagctagctcagcccaaggtttaatgctaaaaataggtctaattctattatatgattgtttacagttttcaaagtgtgtatccatcatgggaaccaaatgcagaaggcaaacaattcttaactaacctccaaaagttcaaggaaaagcaaatacggcagcaggctcttgcacaatatcaagcaatggaagcatcaggctttgtggcaagcaccagaggtcacagggatgatatcttccaccaactactccctagtgatatccataaccgtgctgaggccatctcacctgctgtttacaatttgggcccgttaggattgcttgacacagatcaaagaagtcatccatatattctggattggtactacgtctgccatccacctcacttggatagaaccgaggctccttatttcaacgaagtgttccctgagaccagtgagaacacaggttcagcagcatttaaagcatctgaaattgaagaagcaaggggctgggactctgatatggttcccccgcctcgagcagatcgcgatgagtggaactttaaccatgaaagggttcgaagccatatggatgcatcgacatcaagcaatttgtttcatcatgctccagtagaacaccatgataccaaaggaaatattatcgattggtgggatcaagcacctgaacattctactggtcaacaaggaagttttctggagcctccggaatttggaaatcgatatgttgctggtaaccgttccagttatcactctggtgatgtgtctgatggaagtgtggaagagcttgagcgaagctataacagaagtagcagcagctggagaagacctcaagatttgtccactacaaggtatatggacgactctgacattgaggaagggttgaatcttccttttgctgatctcccgcagaaggatgaagatgctcgacatggcacatctgatactaatgaccccacgccagtcggccttcctgtaagaataattcctagaagcagtgaccctgtttagactgaaaagctctcagatacgtatgtttgtgcatggttgtaaatatctgtgtgaaccacgtcacaaacttcaccaaaactggcaaacgccgcaaattcatttgtacagaaccacatattacctcactgtatagtcttctccctgccctcctagggattgtggagcaggggaagaaccattcttttgcagcacgaaatgcatggatccagttgttgcctcgtttc</dnaseqindica> 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| External Link(s) |
