Difference between revisions of "Os03g0254800"
(Created page with "{{JaponicaGene|
GeneName = Os03g0254800|
Description = Similar to Chorismate synthase 1, chloroplast precursor (EC 4.2.3.5) (5- enolpyruvylshikimate-3-phosphate phospholyase...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0254800| | GeneName = Os03g0254800| | ||
Revision as of 19:32, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0254800 |
|---|---|
| Description |
Similar to Chorismate synthase 1, chloroplast precursor (EC 4.2.3.5) (5- enolpyruvylshikimate-3-phosphate phospholyase 1) |
| Version |
NM_001056123.1 GI:115451974 GeneID:4332286 |
| Length |
3967 bp |
| Definition |
Oryza sativa Japonica Group Os03g0254800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:8228419..8232385 |
| Sequence Coding Region |
8228651..8228805,8229044..8229128,8229395..8229460,8229601..8229695,8229804..8229906 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:8228419..8232385 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:8228419..8232385 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccgcgccaacgtcgtcgcagccggtggcgcgcgtcctcccccgcggcggcggcggcgggttccgcgccttcccggagtccgccccggcttccctccgcttctccgtcggccgccgccgcgccgctcgcctagaggtgaaggcgtctgcaaatgtatttgggaactacttccaggttgcaacttatggagagtctcatggaggcggtgttggttgcgtaatcagtggatgcccacccagaatcccacttactgaagcagatatgcaagtagaactcgaccggagacggccaggccagagcagaataaccaccccaagaaaggagactgacacttgcaaaattctttcagggacacatgaaggaatgaccactgggacaccaattcatgtttttgtcccgaacacagatcagagagggggtgattacagtgaaatggctaaggcctacagaccttcacatgcagatgcaacttatgacttcaaatacggtgttagagcagtgcagggaggtggaagatcatcagcaagagagaccattggaagggtggctgcaggagctcttgcaaagaaaattcttaagctcaaatctggagtagagatcttggcgtttgtgtccaaggtgcatcaagttgtactaccagaagatgccgttgattatgacactgtaacaatggaacagatagaaagcaacattgttagatgtcctgatccagaatatgcacagaagatgattgatgcaatcgataaagtacgagttagaggtgattcgattggtggtgtggtcacatgcattgcaagaaatgttcctcgtgggattggctctcctgtatttgacaaacttgaggctgaattggcgaaagctatgctttctcttcctgcaagcaaggggtttgagatcggcagtggatttgcaggtactgactacactggaagtgagcataatgatgagttctatatggatgaggctggaaatgtgagaacaagaactaatcgttcaggcggtgtgcagggagggatatcaaatggtgaaattatatacttcaaagtagctttcaagccaaccgcgactattgggaagaaacaacatactgtttcaagggagcatgaggatgttgaacttttagcaaggggccgccacgacccatgtgttgtccctcgcgctgtgccgatggtggagtccatggccgcattagtcctcatggaccagctgatggcgcacattgctcaatgtgagatgtttccactgaaccttgctctacaagaaccagttggctctgccagcagcgtacctgcatttgcaccagatctatcataa</cdnaseq> |
| Protein Sequence |
<aaseq>MAAPTSSQPVARVLPRGGGGGFRAFPESAPASLRFSVGRRRAAR LEVKASANVFGNYFQVATYGESHGGGVGCVISGCPPRIPLTEADMQVELDRRRPGQSR ITTPRKETDTCKILSGTHEGMTTGTPIHVFVPNTDQRGGDYSEMAKAYRPSHADATYD FKYGVRAVQGGGRSSARETIGRVAAGALAKKILKLKSGVEILAFVSKVHQVVLPEDAV DYDTVTMEQIESNIVRCPDPEYAQKMIDAIDKVRVRGDSIGGVVTCIARNVPRGIGSP VFDKLEAELAKAMLSLPASKGFEIGSGFAGTDYTGSEHNDEFYMDEAGNVRTRTNRSG GVQGGISNGEIIYFKVAFKPTATIGKKQHTVSREHEDVELLARGRHDPCVVPRAVPMV ESMAALVLMDQLMAHIAQCEMFPLNLALQEPVGSASSVPAFAPDLS</aaseq> |
| Gene Sequence |
<dnaseqindica>3581..3735#3258..3342#2926..2991#2691..2785#2480..2582#2135..2266#1966..2046#1672..1764#1432..1515#1193..1251#1012..1088#704..854#56..191#ctcgcgtcctcgcctcgcttcggctctcaccaaccaaaccaacaacctcgctccgatggccgcgccaacgtcgtcgcagccggtggcgcgcgtcctcccccgcggcggcggcggcgggttccgcgccttcccggagtccgccccggcttccctccgcttctccgtcggccgccgccgcgccgctcgcctaggtccgcctattggaatcgtttcgcccccccttgtctgggtccgttcggtggaattcgggtagagtttgcttcctgcgcggctacggggcagctgggaattgcttggctggcctctctcggctttgagttttgtctggtcatctactcgtgggtgaagagggttgccactcgttgtctggctaagaaagaatcttaccattttttagcatttttttatgccatgattgtgtctattgtatagggtaatttgaaaggagagaaaaacggctgcttcgttctatcctagcatcaagagtttgtttagtatcattgagaatttagatcttggggattaggatgacaactagctttaatgttgccgtgtttggattttgagtgtcatcgtggatactgatcacgtatcttagttagaaatagagtatttaaatctgctactttgcattacttttgttctattagaaggatggcgaaaggacttaattaaatccgttgctcctgaaatttgaaaacagaggtgaaggcgtctgcaaatgtatttgggaactacttccaggttgcaacttatggagagtctcatggaggcggtgttggttgcgtaatcagtggatgcccacccagaatcccacttactgaagcagatatgcaagtagaactcgaccggaggtttgtctcttgaaaaatccattatttctgtgctgacagctggcttctgtcaaaaacaggattatgcaaatgcaatcctgctaacctcttgcagaatatgattgttatgttacattacaccataatgttaactgacataaaattttgattatcacagacggccaggccagagcagaataaccaccccaagaaaggagactgacacttgcaaaattctttcagggacacatgaaggtatggtgtctttcaggacatgggataaacttggaaaaaatatttttgaatttagagtattagcttgtctcatattcacgatagcattgatgggttttctgcaggaatgaccactgggacaccaattcatgtttttgtcccgaacacagatcagagagggggtgtaagtacctaagttttttcgcattaatgtattgaaatactacctccgtcccaaaatataacaacttttggctacgaatctggacacacaattgcccagattcatagctaaaaatgcttatattttgggacagagggagtaacatattaaagctggaaataaccatattcattcccacaggattacagtgaaatggctaaggcctacagaccttcacatgcagatgcaacttatgacttcaaatacggtgttagagcagtgcaggtactttttttcatgttttataatgtgtaatatagccattcattgaaccatcaactgtagtacctaaacttctcttatttgaatgtctaaaactgtggtacctaaacttctcttacttgaatgcctaaccaacatcttctatcaaccgaatgatagggaggtggaagatcatcagcaagagagaccattggaagggtggctgcaggagctcttgcaaagaaaattcttaagctcaaatctggagtagaggtgtgatcctacttggcaaccttttactcttaactgatcaagatttgtatcaagcatcgcaattgacatgtttacttatccatgaacaattggacgctgaagaaaaatgaatcagcattcgaatatacatcctaaatatgctgaagccatgcaacaaattctgtccaatgtctcatagcagcaaaatattttcaattgcagatcttggcgtttgtgtccaaggtgcatcaagttgtactaccagaagatgccgttgattatgacactgtaacaatggaacaggtctgtggttcccaccattttcaagtttaacacttctggacagtctctgaaggcatttgctgaatattatatttattttattttccagatagaaagcaacattgttagatgtcctgatccagaatatgcacagaagatgattgatgcaatcgataaagtacgagttagaggtgattcgattggtggtgtggtcacatgcattgcaagaaatgttcctcgtgtaagtatttaaaccctgcagttatgtttattttgatatatgtcctccagctaaaataaactaaataagctcatcgtttgcactctctgcttatgaccgccctgctttggaatttgcacaaaatctgtttgaacattgaagcttgatcattcattagaaaaatattttttctctgttgagctactgatatgatagagcaacgacaatttgtaggggattggctctcctgtatttgacaaacttgaggctgaattggcgaaagctatgctttctcttcctgcaagcaaggggtttgagatcggcagtggatttgcaggtaattgaattaatctgcacataattagttgatttattttttgcaaatagctgtgcatgccaactactttgctactggcctcaatactaactaataacttgtgcccaggtactgactacactggaagtgagcataatgatgagttctatatggatgaggctggaaatgtgagaacaagaactaatcgttcaggcggtgtgcaggttttatcctagtcccctgttgttttacagttatattatttattgttttcgctacatctagctgcattctagattaaaaaaatactagtaaatagtataacaccgttgtcttagtatttataatgtgtatgtccatgcagggagggatatcaaatggtgaaattatatacttcaaagtagctttcaagccaaccgcgactattggggtgagatattccggttcaagtaactcattttttcatcagtatattaaaaaaaaatctatccttagaaatagtgctatgtcatgttttttaaatggcaagcactatggtgttgtagtcttgtggatgcagctaaaaccagtgttttctcatagtacattttgtgtcttttacggtgtatcatatattcatatgtaacatttgaggatttctatttcttaaaaggctatattgctacttatttgagatattggatttcgcttttccagaagaaacaacatactgtttcaagggagcatgaggatgttgaacttttagcaaggggccgccacgacccatgtgttgtccctcgcggtaatggatctacggctctactacctccgtcctagaataagttaatatagtacgggatgtgatatatccagtataacgaatttggtcaaacacctatccagattcgtagtaggatatgttacatcccgtactagattaacttattctggaacggagggagtacctaaattttccttcccttaaccactcactcatgatagtataatctgacattttctcaatcaattaactcttgtagctgtgccgatggtggagtccatggccgcattagtcctcatggaccagctgatggcgcacattgctcaatgtgagatgtttccactgaaccttgctctacaagaaccagttggctctgccagcagcgtacctgcatttgcaccagatctatcataatgccccctcccccccccccagcttgtttatcatctatcatatttctgggttttctaaggggttcgcagttttgccacaaagcctgtatcctagtttatatctcgagttattgtacccaaggaatccgttatacagtgagcatgaagatagaaatgcgttcatgcgtgttttgtgatatggacaatctgtgcttacatcaggttattttgagcaataaaaatctccatttatg</dnaseqindica> |
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