Difference between revisions of "Os03g0259400"

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(Created page with "{{JaponicaGene| GeneName = Os03g0259400| Description = Similar to Leucoanthocyanidin reductase (EC 1.17.1.3) (Leucocyanidin reductase)| Version = NM_001056147.2 GI:29760068...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0259400|
 
GeneName = Os03g0259400|

Revision as of 19:32, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0259400

Description

Similar to Leucoanthocyanidin reductase (EC 1.17.1.3) (Leucocyanidin reductase)

Version

NM_001056147.2 GI:297600681 GeneID:4332311

Length

1444 bp

Definition

Oryza sativa Japonica Group Os03g0259400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:8457516..8458959

Sequence Coding Region

8457516..8457775,8457858..8458061,8458153..8458390,8458499..8458648,8458735..8458959

Expression

GEO Profiles:Os03g0259400

Genome Context

<gbrowseImage1> name=NC_008396:8457516..8458959 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:8457516..8458959 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcctgctgctcaggagctgctgctgcaagaagtgccgcagcctcgccgcaccggcgcggccctcatcgtgggcgccaccggctacatcggccgtttcgtcgccgaggcctgcctcgacagcggccgcgacaccttcatcctcgtccgccccgggaacgcctgccccgcgcgcgccgcctccgtcgacgcgctccgccagaaaggcgccgtcgtcatcgagggctgcgtcggggggaaggaggggaggaagtccgtggaggcggcgctccgcgcgcgcggcgtcgaggtggtgatctcggtgatgggcggcgccagcatcctcgaccagctcggcctcatcgaggccatccgagctgcaggcacggtcaaaaggtttctgccgtcggagttcgggcacgacgtggacagggcgcggccggtgggggcggggctgaggttctacgaggagaagcggctggtgcggcgggcggcggaggcgtcgggcgtgccgtacaccttcatctgctgcaactccatcgccggctggccctaccacgacagcacgcacccgtccgagctgccgccgccgctcgaccgcttccagatctacggcgacggcgacgtcagagctttcttcgtggctggaagcgacattggtaagttcaccatcagggctgcctacgacgcccggagcatcaacaagatcgtgcacttccgtcccgcctgcaatctcctcagcacgaacgagatggcgtcgctgtgggagagcaagatcggccggacactgccacgcgtgacgcttaccgaggaggacttgatcgccatggctgcagatgacatcatcccggagagcatagtcgcttcactgacgcatgacatttttataaacggttgccagacacatttctacatagacgggcctagagacattgaaatctcaagcctttaccctgatattcccttcagaacaatagacgaatgcttcgacgactacatacatgtcctcaacctagcagaggaagctaaagaagaggaggagaagaagaacgcgccaacagttgggagattggcaataccacctacttgtgcttag</cdnaseq>

Protein Sequence

<aaseq>MAPAAQELLLQEVPQPRRTGAALIVGATGYIGRFVAEACLDSGR DTFILVRPGNACPARAASVDALRQKGAVVIEGCVGGKEGRKSVEAALRARGVEVVISV MGGASILDQLGLIEAIRAAGTVKRFLPSEFGHDVDRARPVGAGLRFYEEKRLVRRAAE ASGVPYTFICCNSIAGWPYHDSTHPSELPPPLDRFQIYGDGDVRAFFVAGSDIGKFTI RAAYDARSINKIVHFRPACNLLSTNEMASLWESKIGRTLPRVTLTEEDLIAMAADDII PESIVASLTHDIFINGCQTHFYIDGPRDIEISSLYPDIPFRTIDECFDDYIHVLNLAE EAKEEEEKKNAPTVGRLAIPPTCA</aaseq>

Gene Sequence

<dnaseqindica>1185..1444#899..1102#570..807#312..461#1..225#atggcgcctgctgctcaggagctgctgctgcaagaagtgccgcagcctcgccgcaccggcgcggccctcatcgtgggcgccaccggctacatcggccgtttcgtcgccgaggcctgcctcgacagcggccgcgacaccttcatcctcgtccgccccgggaacgcctgccccgcgcgcgccgcctccgtcgacgcgctccgccagaaaggcgccgtcgtcatcgaggtgattagagtttaaaattaaccaacttagttaagcgcgcggaaatgaacacatatttggattcatggcgtgtgtgctcgtgacagggctgcgtcggggggaaggaggggaggaagtccgtggaggcggcgctccgcgcgcgcggcgtcgaggtggtgatctcggtgatgggcggcgccagcatcctcgaccagctcggcctcatcgaggccatccgagctgcaggcacggtcaaagtacgtacactacacattttacatacgagcgcgtgcatgcgcgcgtcgcacaactcggatttttggcacgtaaagtttggtctgcgcggtgcgtgtgcgtgggtgcagaggtttctgccgtcggagttcgggcacgacgtggacagggcgcggccggtgggggcggggctgaggttctacgaggagaagcggctggtgcggcgggcggcggaggcgtcgggcgtgccgtacaccttcatctgctgcaactccatcgccggctggccctaccacgacagcacgcacccgtccgagctgccgccgccgctcgaccgcttccagatctacggcgacggcgacgtcagaggtacgtagtacacgctcatgcttgcgccgcatgatgaaattcaccttcgatgcgattttgccaacggtgtgctgcatgcgcgcgcgtgcagctttcttcgtggctggaagcgacattggtaagttcaccatcagggctgcctacgacgcccggagcatcaacaagatcgtgcacttccgtcccgcctgcaatctcctcagcacgaacgagatggcgtcgctgtgggagagcaagatcggccggacactgccacgcgtgacgcttaccgaggaggacttgatcgccatggctgcaggtttggccacctaaaagaatactctcgcgctctaaatggaattttgtcatggtgtatgatctattcatcattttgactgcagatgacatcatcccggagagcatagtcgcttcactgacgcatgacatttttataaacggttgccagacacatttctacatagacgggcctagagacattgaaatctcaagcctttaccctgatattcccttcagaacaatagacgaatgcttcgacgactacatacatgtcctcaacctagcagaggaagctaaagaagaggaggagaagaagaacgcgccaacagttgggagattggcaataccacctacttgtgcttag</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0259400, RefSeq:Os03g0259400