Difference between revisions of "Os03g0283800"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0283800| Description = RabGAP/TBC domain containing protein| Version = NM_001056292.2 GI:297600743 GeneID:4332461| Length = 7029 bp| Defin...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0283800|
 
GeneName = Os03g0283800|

Revision as of 19:33, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0283800

Description

RabGAP/TBC domain containing protein

Version

NM_001056292.2 GI:297600743 GeneID:4332461

Length

7029 bp

Definition

Oryza sativa Japonica Group Os03g0283800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:9794883..9801911

Sequence Coding Region

9796817..9796930,9797532..9797590,9797727..9797793,9797862..9797913,9798114..9798295

Expression

GEO Profiles:Os03g0283800

Genome Context

<gbrowseImage1> name=NC_008396:9794883..9801911 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:9794883..9801911 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gatttgcctcgaacatttccgggacaccctgcactagatgaggacgggagaaatgctttgcgacggttattaacagcatatgcaaggcataacccatcagttggatactgccaggccatgaacttttttgctggcctatttttattattcatgcctgaagagcatgcattctgggctctggtgggggtcattgatgagtattttgatggttattacactgaggaaatgattgaatctcaggttgaccagcttgttcttgaggaagttgtacgagaaagattcccaaaacttgcaaagcatatggatttcctgggagttcaggtggcatgggtgactggaccatggtttctttcaattttcatcaatatgcttccatgggaaagtggtcaggttttatgcaatagcttggtgctttcattaagatatatactcatacttatacatttgatgttcggtaccagtcccttaaattga</cdnaseq>

Protein Sequence

<aaseq>DLPRTFPGHPALDEDGRNALRRLLTAYARHNPSVGYCQAMNFFA GLFLLFMPEEHAFWALVGVIDEYFDGYYTEEMIESQVDQLVLEEVVRERFPKLAKHMD FLGVQVAWVTGPWFLSIFINMLPWESGQVLCNSLVLSLRYILILIHLMFGTSPLN</aaseq>

Gene Sequence

<dnaseqindica>1935..2048#2650..2708#2845..2911#2980..3031#3232..3413#atatctatctccgttgcttcgcgtctggggcctcgggcggcgcgcgcggggaggggcgtggtgcaattaacgggcgcgcagctccaccttgccgcgatccgtcgcaattctttgattcccttcgcggaatttttctttcttttttttccccattccatgtgcgtggatctcggggcgcggggctagggtttagtatggctttggtcaatccatggcgtgcggtgccgaggtcgccctgtcgcttcttctttaatgcgcgttgatccccatggacggcgagtgccggtaaaacccaataaaaggcgcctccttttcctttcctccgcctccctctcgctagcatttattgtcttgtattgttgcatacgtcgttgttcgtttaggttggatttgggttaggatttgtgtggcataatgcggtggttggaattgccttcgggagttgtggttgatggtggtgaggtttggcgcagggacgcgtatggattcgcggtgcggccgcagcatctgcagcgtttccgcgagtatgccaagatttacaaggtaatttaccaggggcagagtagaaatggaaatgcgttgtttttgtttgtttcaggttaagttttgatacatactgtactatttttttggctgttgtttggtttatcaggaagaagaagaggagagagcggacagatggaaggacttcttggacaggttggctgaatctgcagatgacatcacaaccagcatttcaccttccaaagaggactctgctgctggagatgtcaatggtggagaacaccttgatggagctgaaaacttagagaatagcaataggggtggaataaaatgcaacaatgaagaagaggagggagaagaggatgcagaaaagagcgatacaccagaaaattcgaaggaaattgatggcaacaatcaatcgcaagaagcaaatggtgaggcggacgatatcaatgatgtatctgccaactcagaaaatctgaaacaggagagcattgcaaactccgtagaatcggacaaagctccagaagaattgaaggaggtgagtgggtgttcagaggaactattaaatgatgagaatggtgattctgaaggattaaaagattctcatggtgccttggaaggattaggtgaagcgaacaacgacaactcggaaaagttagaagagcttttcttggataaggggttgttggatgaactgaagcctataagagttgagtctgggaagcgggtgcgggcatcaatcagaatcattgagaaaatgatgagctctcgagtgggcaagataaggaacactgcaaatgacatgtgtggaaatggtgaagcacagcttgcatcaattgaagaggaggaaagggcagcagataagagttgtagaggggatccagcagaggaatcttctaatccagataaggtggagcaggcacaggacagggaacaaggtgattctgcgagtgctgctttggagggaggcaatggcgagtcttatttcccttggagggaggaactcgagagcttggtccgtggaggtgtgccaatggctcttagaggagaggtgcaactgtaaccagaattatctgtactgtttttatatccttataatagatatatacctacactcacatatggttgattttattgcagatgtggcaagcatttgtgggtgttggtgctcgtaaaattactgggtactacaacaaattactagatgaaggtactgaggaattggatgaaaagaaccctgaggaccaagagttgaaagatcagacaaatgcacagaaaaagcccccagagaagtggaagggacagatagagaaggttgctctctgatttgaaatgggaggaactaatgtcatgttttagaagttctactgttctaggtctctactctctacacacttgaatgcttgatttgcctgttatcattataggatttgcctcgaacatttccgggacaccctgcactagatgaggacgggagaaatgctttgcgacggttattaacagcatatgcaaggcataacccatcagttggatactgccaggtgaacaaatgctcattggataattttatgttagtttttaacctcttgtaatctactccctccgtcccataatataagggattttgagtttttgcttgcaacgtttgaccactcgtctgattcaattttttttgaatcaaggtacttagtacctagtacctagaggtaccaaattttacactagaaaatgtggtaccttctcaaggatggtaaaattacccaatttataatcatatgcatgtgctgcgaaataatgtattacctttgagtaaaagatgaattgatgagggctgtattttatactgagagatccatcgtgaactatgaaacttgtcacttttcaatcatccacgctgacaaacgaattatgaatattgtaacttcagaggtgatttacaaggttaaaatcaattaagtctatcccaagttccaaatatgcaattcaactattagctagctttgcaaggctggcaaaatcattaaatgttctatatgctagacaccattaatctggctcagaaacatctgttgcattttcttttgtcaatataactagagtgcctttactctttaccttatatcttcattgttcttcttgcaggccatgaacttttttgctggcctatttttattattcatgcctgaagagcatgcattctggtatgcttttattaaatgccttgtctcttgaaaaaaaatacttgattgataatttttctttgtattttcaagattgtatgctaactctaattccactttatttttctcgttttcgctcatcattttgaattttcagggctctggtgggggtcattgatgagtattttgatggttattacactgaggaaatgattgaatctcaggtacttcttaattcatgatacatgtaatgtttcccaaaatcctcgttaatgttactgcccgtttacaggttgaccagcttgttcttgaggaagttgtacgagaaagattcccaaaacttggtttgtatttcaatgatattattactacacttgtccttttgtagcattctgcatttcacattatcttaaaaaaaacatggtcctggtcatgcttttgtattcagttgaaatgttgagatgactttatttgtttgaacacataatgtatcaactttgtggtgtatcactctgtacttacatcaattacaaccctctttcagcaaagcatatggatttcctgggagttcaggtggcatgggtgactggaccatggtttctttcaattttcatcaatatgcttccatgggaaagtggtcaggttttatgcaatagcttggtgctttcattaagatatatactcatacttatacatttgatgttcggtaccagtcccttaaattgaacgaaacatgcataccaaattgttaggataatgagaatcccgttctattattttttgaatgttacatattcttgtcatgtatgttaataatttgttaggtttaacatcatctgattgaaacttttgcattctcttagttcttcgtgtttgggatgtgatcctttttgaaggaaatcgaacgatgttgttccggacaacgcttgctttgctcgacttatatggtataacttaatccctgaaaaagctattgtttcctattatttgttcttttctaataagcattgatgtgtaagtgtaatctacactgttgtctttgtatgttgatttgtagggcctgccctggtgaccacaaaggatgctggagatgcaattacattattgcaatctcttgctggctctacttttgacagcagtcaacttgtgttgacagcttgtatgggttttcaagcagtcagggaaatagggctgcaggagttaaggaaaaaacacaggcctgatattatatctgctatggaggaaagatcaaaagaccgccattcttggaaagataagaagggtttagcaactaaactttacagctttaaacatgatcctctatgcccacaagttaattccaaggaaggggaagatgatttgcaagtgaatggggaaatgcaatttttagattctgggtcagcaaatctagaaacctaccttactagttcagctctagataatgagttggaagagggcattgatcttcaagatcaggtaagaacttctctgtactgatttatttgtactgaatgagctgatgttttctctaacagaaacaaaaaaacaatgtgcttataatatgcattcaaatttattggtcattctgataattgacattcaggaatttgtgtcacggtccttctgtataattgaatggttcctatcaatatttacgttcctttctgagcttaatattcagatgtttttttgccaatatggaatttttagttaccttttcttatgttaaacatgatgaatttctatactcaactactcaagcaatgctcacaggtaacatggttgaaagttgagctgtgcaaactgctcgaggagaaaagatcagctgaactcaggtttgttgtgcttctattctggatctatttatccacatagttaaattgtacaggtatagttacaaagaagaatagcaatagtacggaagctatcccagccactgctagatataacaacctgcaaaactcggaactcttaaatataaatcgttaaggagggaatttctccatctaaacttatttggagcattccatcaaagatgtgtctggttctttccaaccagataggccagctcccagcattcaagagtaattagttctttaagaataattcccccttttctcagtttcacagtaaattttaaataatttttgcatctaaaataattggtaaagtcttcgtcaaattcatgcatactttcatctaagttgtcgctgtaatgttttgggccattaacttagttttgtactgtgtccaactcctatcatgatctattaacacatgtcatgctctcagaagcgaggagttggaaactgctttgatggaaatggtcaagcaggacaacagacatatgttgagtgctaaggtaagatgttatctacaactgcttctctttcccctccaggactgcacaacttaatgcaatccaagacttctttataattgaaccaattgcttgaagattacctagtagtagtgtagttatagtccttaaatctgttttgtccttcgggcttaaatttgggcacattcattcttgacttagaaaagattctcaggttgagaaattggaggcagaggtatctgagttgcgaaagtcctttgcagacaagcaagagcaagagcaggcaatgcttcaggttctatcttacagcttagtatgcctgtgctttatgccatctggttggctaaaatatatacatatttacatatgcctgcaggttttgataagaatggagcaggaacagaaagtggcagaagatgcccgcatagctgctgagagagatgctgctgataagaaatatgctgctcagttgctccaggttgcttcaagatgttctctcaaactgctagttttacacgtacaatttgtaatatctgtaaaaagggagttgcataacctttttgttcctcgtacattcaggagaagtatgacgcagcgatggcagcacttcgacaaatggagaagagagctgtaatggccgaaactatgttggaagctacaaagcagtaccaggcagggcagtttaaggccaaccagtccttcaatccaaggtatgtttaaactcctatgctatatgtccagtatcatggatgagttctgatcaaatgataattattaattaagtaaatttcataaaacacacttattatggtataagttgcacaaaaccacaggaatttcggaatgtggcacataatcccaggtatttatggtcctaaagttttacaaaaccacacattaagcatttagggagcagtgggcatgactaatttgcttttgttgcatcgtatcatacttgctagtggtgatgcttcagatagttccttttcgttttctcagtactccattcatttattaacataaatcatccttagctacaaatgacatattactgatgtttcttgttggtttttaacattcaactttctaacactgtctttgcatggtgacacttcgtttactcgggattcttttgtagttcacctcgtgctgcccctcagtctgggaagccaaatcaagatcctaaccaggatgcacctaacaggagattgggcttgctttctaggggccttggttggctagagaaaagcaaggtaccttgatttgtttaatgcttcaagatacgacttaatttgagtaaaaaaaaaggggatatcctctttatttcatatttggaaaagaaaaaaaatattaacatcatgatgagccaaatggctctaggaagatgatacaaacttgaggtacaattgttcattaactttgattttttttttatcagggaaagtctagttccactgaaacacctgaaggctaaactcctgtcgaatcaggacatgattgttgctaaggattggattacctgatcaccagaaaaatgcgttcatgcaagcatcaatgttttgcccgcaggaagattcaacatgaatttcccatgaagttttgctgaaattgtcatatgtatcatatcgagcccagttgtcagatgcagcttccttgttaggttcgaattgttgtaatgcatccgtgtaaattttctttttcaattagttttattaagattgtcgatagttagttccggataggagaaagaaaaggcacactacttcccatacacattagattagtttgcgacgatgtcgtggtattataccggtgaagagctgtttttatacctcttcgggaagagttgtgcaggagtagtgcaaagaaatgatgtttttttattcatgtgacttgctttcacacgagtgccttaagcatattaatttcatatgttgtgtaaacaccgagtctccactgagaatgctcttttttaaaataaataaataaataataataatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0283800, RefSeq:Os03g0283800