Difference between revisions of "Os03g0300300"

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(Created page with "{{JaponicaGene| GeneName = Os03g0300300| Description = WD40-like domain containing protein| Version = NM_001056391.1 GI:115452510 GeneID:4332567| Length = 5482 bp| Defini...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0300300|
 
GeneName = Os03g0300300|

Revision as of 19:33, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0300300

Description

WD40-like domain containing protein

Version

NM_001056391.1 GI:115452510 GeneID:4332567

Length

5482 bp

Definition

Oryza sativa Japonica Group Os03g0300300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:10606895..10612376

Sequence Coding Region

10606981..10607074,10607181..10607332,10607420..10607535,10607707..10607861,10608605..10608693
,10608823..10609357,10609486..10609653,10610305..10610483,10610605..10610684
,10610782..10610890,10611906..10611980,10612076..10612237

Expression

GEO Profiles:Os03g0300300

Genome Context

<gbrowseImage1> name=NC_008396:10606895..10612376 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:10606895..10612376 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcccgcggccgccaccatccgcgacctgctcacctccttcagccccgccgcggacttcctcgccctctcctctggcgacggccgcatcaaggtatgggacgccgtgcgcggccaccttcagaccgagttcgctgatatcccgccggtggaggtgggcggcggcgcgcgcgcccccggggcgaagcgcggtcacctcgcactggactacacctgcatgaagtgggtacagctatcgagcaagaagaagcggaaggcagggagttcgctgctggtgcttggcactggcagtggagatgtccttgcacttgatgtcgccgcagggcagtggaagtggagggtcactgattgccaccctgggggtgtcacagctgtagcctactcgaagcatgggcgaagtttgtacaccggaggcactgatggcatggtctgtaggatcaatgcctcagatggctctgttgtagagaaatttaaatcttcatcaaaagcaatttctgcattagctgtgtcaccagatggggagattttagcaacagctgctggccagttgaggacctttgatgcttctgataacaagaagattcaaaaattctctggccatccagtagctgtgaggagcatggtttttagtggtgatagccaatatgttctgtcatctggagttggggaacgctatgttgccatttggaagttgggtagtggtaaaactcagagttcaagctgtatactctctatggagcatccagcgatctttgtggactgtaaatgttcagacattaatgatacagaaggagaaatacatgtgttggctatttctgagattggtgtctgctacttttggtctgggactaatatggatgacctgcgtaataagaagcccactaaaattgcattgtctgattcctctctttcaagatctaagcaaggttttgcaatatttgccgcaaaactgcaaggaatagatggccctaattctgcacatgttctgctggcttatggatctgtggtgaaaccgtcttttgacaaactgttggttcgttatggcatggatattagtttgggtgtatctgatgatggagttctcttacccatgattcaacccacaaagcctcagaaaggccaatctgctaaaaagcaaggaattataacggctctagaccgtgctaatgcagaagatgcaatccttcctctcccacagctccatacgcaggaaaagaaaaggaaacataatgcaacagaatccagtggtgacatccagtctgcacctcatagtgaccttagttctacaaaattgattgagaaaagagctcctatgcaaagaattgaagatgacagtgtatgcatcgaagacatgatgcggaagtgtggagttattgattctagagttgatcagggcatggaaggtcatcctagcatacccactagtattttatctgatctatttggcagcagcagtaaaatcgatgctaatttacccaacaagaagattcgagcacatctaagatccttgaagcctggagatgcttgcgaacttttagaaaaattagtatcttcatggaaaacaagatctggtagtgcagaggttgttttgcggtggatatactgcttattaattatccatggtcgttttatcccctttgagaaatctaaaaaaataattagcgaccttgagaagatgtgtggggaaagatacaaagcagctgaagatttactgaagctttctggtcgtcttcgattgctcatggctcagatcgtcaaggatccaaacgatgtttctgagcttccatcagaggagatgcaggattcagcggctgctcagtctgatgaagaggaggaagatgatgaaattgatgaaacggtgtatggtgaagacgctgattcgtctcaaacaagtgatgacgacgctgaatag</cdnaseq>

Protein Sequence

<aaseq>MAPAAATIRDLLTSFSPAADFLALSSGDGRIKVWDAVRGHLQTE FADIPPVEVGGGARAPGAKRGHLALDYTCMKWVQLSSKKKRKAGSSLLVLGTGSGDVL ALDVAAGQWKWRVTDCHPGGVTAVAYSKHGRSLYTGGTDGMVCRINASDGSVVEKFKS SSKAISALAVSPDGEILATAAGQLRTFDASDNKKIQKFSGHPVAVRSMVFSGDSQYVL SSGVGERYVAIWKLGSGKTQSSSCILSMEHPAIFVDCKCSDINDTEGEIHVLAISEIG VCYFWSGTNMDDLRNKKPTKIALSDSSLSRSKQGFAIFAAKLQGIDGPNSAHVLLAYG SVVKPSFDKLLVRYGMDISLGVSDDGVLLPMIQPTKPQKGQSAKKQGIITALDRANAE DAILPLPQLHTQEKKRKHNATESSGDIQSAPHSDLSSTKLIEKRAPMQRIEDDSVCIE DMMRKCGVIDSRVDQGMEGHPSIPTSILSDLFGSSSKIDANLPNKKIRAHLRSLKPGD ACELLEKLVSSWKTRSGSAEVVLRWIYCLLIIHGRFIPFEKSKKIISDLEKMCGERYK AAEDLLKLSGRLRLLMAQIVKDPNDVSELPSEEMQDSAAAQSDEEEEDDEIDETVYGE DADSSQTSDDDAE</aaseq>

Gene Sequence

<dnaseqindica>87..180#287..438#526..641#813..967#1711..1799#1929..2463#2592..2759#3411..3589#3711..3790#3888..3996#5012..5086#5182..5343#gagcaaaacctttcgccgcgcagccacctaaacccctctcctcccccttcctctcccgccgccgccgcgcgcgcgagccggcggccatggcgcccgcggccgccaccatccgcgacctgctcacctccttcagccccgccgcggacttcctcgccctctcctctggcgacggccgcatcaaggcatggagctcgaagctttccgcccgcccatcctccaaaccgccgggagctgcacggttactgatgatgccatgggctaactcgatcctttccacctccattgcaggtatgggacgccgtgcgcggccaccttcagaccgagttcgctgatatcccgccggtggaggtgggcggcggcgcgcgcgcccccggggcgaagcgcggtcacctcgcactggactacacctgcatgaagtgggtacagctatcgagcaaggtgagcattgcccccgaattttcgagcttctacggttggtgttgtggtaccgtgtgcctatcgtgtgctcgtgtttttgccttgcagaagaagcggaaggcagggagttcgctgctggtgcttggcactggcagtggagatgtccttgcacttgatgtcgccgcagggcagtggaagtggagggtcactgattgccaccctgggtacgtttggtgcttccatgggaactcgtggcttcatttgttaaactatactccaagctcattgaacccttgattgtcgctttgaacatgtttggaatttctatgttaatctccgcaagctttagctagatgtgttctcttacattggagtgcttgtttttatgtgttcaggggtgtcacagctgtagcctactcgaagcatgggcgaagtttgtacaccggaggcactgatggcatggtctgtaggatcaatgcctcagatggctctgttgtagagaaatttaaatcttcatcaaaagcaatttctgcattagctgtgtcaccaggtatgcccatgaaattacgccgctggttttatgtctggtttcacccccactgaactccccatttgctaactatgcatacactactttacttcctatgttgtgtgcccgttggtcatctggtttacctatattgatgttttaggatattaaactgtcttctttaatatttgtcaactgtaacttgattgccctgagggacactaataatagttgaagtgttgagtgttttctgtaacctttgtaatgaataacattttcaacttattttgccgtgctattgtgttgatgccccgctgttggctaatttatggcctaggagttctaagtgcctcttgagatgttcccttttcacatgtaacattaatgttcttctcgaagtagagatggaaatgtaacataggtatacctgtcggacacacgaattgaataaaaaaaagcccagagttcttccttgaaatatggtgtattgattatgcatatggatttagcttgttgcatgaatttgaagcttaaaatctttatttatcaattaataagatgtatgtatagaaatattctctttgctgatatttgtagtttgcttaggccttttaggatctaatatctatattgattatatgtcttgtgctgtaacaaaacatgcgtatgagtatgttgcacttacatctagtctctatctgaaccatgtccaccctagctcaaacttcaaagtaacaaatactgcttttgcttcattttattagatggggagattttagcaacagctgctggccagttgaggacctttgatgcttctgataacaagaagattcaaaaattctctggccatccagtgagtgtctttgcttcctcgtcctttaagtgtgttctacttctgagattgtttatctttctgctcgtattattttgtcctaaaatgctaaccttctgctattggctaccctaaaattaacatttttaggtagctgtgaggagcatggtttttagtggtgatagccaatatgttctgtcatctggagttggggaacgctatgttgccatttggaagttgggtagtggtaaaactcagagttcaagctgtatactctctatggagcatccagcgatctttgtggactgtaaatgttcagacattaatgatacagaaggagaaatacatgtgttggctatttctgagattggtgtctgctacttttggtctgggactaatatggatgacctgcgtaataagaagcccactaaaattgcattgtctgattcctctctttcaagatctaagcaaggttttgcaatatttgccgcaaaactgcaaggaatagatggccctaattctgcacatgttctgctggcttatggatctgtggtgaaaccgtcttttgacaaactgttggttcgttatggcatggatattagtttgggtgtatctgatgatggagttctcttacccatgattcaacccacaaagcctcagaaaggccaatctgctaaaaagcaaggtatactgctggtatctatagatatacacataatcctgcacttctgtttggtcccttgcctccattgcagaacgctcaactattgtcaatggttactcttgggctaaatctcaattgttttcttgtaggaattataacggctctagaccgtgctaatgcagaagatgcaatccttcctctcccacagctccatacgcaggaaaagaaaaggaaacataatgcaacagaatccagtggtgacatccagtctgcacctcatagtgaccttagttctacaaaattgattgagaaaagaggtaaatcatctgtttgtagcatcttcagtagtcataattcttttgttctcatggcagtgtagatacgaactggtacataactggcacagttagctagtggaagtgtggaaccacataagtttgtatagtacatatatgtgtgcttccgcatgtttgggcaaacttcaaataaatatactataacatcttataagttacaaatgaaaattattattataatccattctaataattatatacatgagtgcatgagatcaatctacctagcctacgaatacgcatgcaaaataacctggtcttttacaaaagatccttcaaacaacaaacatgttttcgggagtggggaaatgggtgtagagcacacccatttgcctccaactccatctcaaaggaagataagtgacgttatgtgtccatatgatctttctctagagacttttaactctgtgggagcaatttattgcaggggcctatacccttgtggttttcatggcaagaatgtaacaactgctatgagcaataattctagtctctcagttgttataggttttactatagttttaacattaaacacaaattttgttatatttaacatgtatttctgttaaattgatcttcactatttgctcaaaaacccttttgcttgtctagctcctatgcaaagaattgaagatgacagtgtatgcatcgaagacatgatgcggaagtgtggagttattgattctagagttgatcagggcatggaaggtcatcctagcatacccactagtattttatctgatctatttggcagcagcagtaaaatcgatgctaatttacccaacaagaaggtttgtgagaactgaatttcagtcaaatgttctgtacttccaccatataactgtttgcatgtttacacattacagtatatatacaactgatgaaacctgatgcattgatatggttcaacagattcgagcacatctaagatccttgaagcctggagatgcttgcgaacttttagaaaaattagtatcttcatggaaaacaaggtgtccatgactcttttcccatgtttgttcccccacaacgcattttcattcgtttttatccttgtatgcttaccaattgctgatttattctctacagatctggtagtgcagaggttgttttgcggtggatatactgcttattaattatccatggtcgttttatcccctttgagaaatctaaaaaaataattagcgaccttgagaaggtattatatgtgttaccagtactatctcttgtgtgctatgcagattatttgaaacatgttactgttgtggttgtcatcatgctgtgttgtagtggagttggggggttaagctattagcaactattgccttaaatgactgcagaatgtggataacatattctgattctaatttaaagaccaccaatgcaggcagggtatttcagaatatagtttcgtgacctatttttctgataaaagtacaagtaacaatgatggcaagaactcacctttgatgagaacttgccaagtcacaatctgagccatttgatccactctagtggatgctaatgtagttgttttcccatgagagttctcaagtcgtcattgaacaatggattcccattttagatatctcctgacaactcaaacaatgttgtattgacacttcataacatcaattaaaaagtcatgtgcagtattgagcaaagcacatagaaagttaaagaaataagcatgctgtgtatctagattgggaagatgtcatgctatgcagtgctagtaaattatagatatctttattttatgtaccatgactgatttgatcaagttgcccccaccaatgctggccaatttctgttatgtcaaatctggggttgtcaatttggctgcccaaacttataataaatttactaaagtatattgcatgcccagtatttacaaatgaaacacttcccaatttcaacaacatggtcagattttgatcaatattacttggaaaaaaactgagactataactgtgtgtttactacgtcaagaaaaagaactgaaaattcaaaggtcgaactgaaccaccgcaactatgagcttaccatgtcttaccatgtcgaacatacaaaacaaaaaattgaaatgaaccattacagctatgtgtttttcttcttttttcttcttcggggaattgcaactatgagtttaccatgcgaaacaaacaaaaccaaagttgaagagattgaaagaaaccatttttcgtttgcagatgtgtggggaaagatacaaagcagctgaagatttactgaagctttctggtcgtcttcgattgctcatggctcaggttttaaccattaataatactgcgtaatgagtcaatattcttagtgtataagttaatgatgatttaatgatcatgtgcgtacttcacttttgtagatcgtcaaggatccaaacgatgtttctgagcttccatcagaggagatgcaggattcagcggctgctcagtctgatgaagaggaggaagatgatgaaattgatgaaacggtgtatggtgaagacgctgattcgtctcaaacaagtgatgacgacgctgaatagaaacactgagactaagcgtagcattcttatgatgtgttgttttatattcaaacttgattaccccgtagtcaggtttgtatgactaagcaaccccgaagggttgcgcagaattttgacgaggcgaagcatcctctgaatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0300300, RefSeq:Os03g0300300