Difference between revisions of "Os03g0312600"

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(Created page with "{{JaponicaGene| GeneName = Os03g0312600| Description = Similar to XPA-binding protein 1 (HUSSY-23)| Version = NM_001056460.1 GI:115452648 GeneID:4332638| Length = 2963 bp|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0312600|
 
GeneName = Os03g0312600|

Revision as of 19:34, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0312600

Description

Similar to XPA-binding protein 1 (HUSSY-23)

Version

NM_001056460.1 GI:115452648 GeneID:4332638

Length

2963 bp

Definition

Oryza sativa Japonica Group Os03g0312600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11222308..11225270

Sequence Coding Region

11222463..11222522,11222627..11222753,11222889..11223115,11223994..11224284,11224526..11224731
,11224823..11225102

Expression

GEO Profiles:Os03g0312600

Genome Context

<gbrowseImage1> name=NC_008396:11222308..11225270 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11222308..11225270 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacgtcgactccgacccagccgccgcgggcaagcccacccagatggacctcgaggaccagactgacgcgaaggggaaggggaagagcgaggagctcgcggactccatcgggagcctctccatcggcccggagcgcaccaatttcaagaagaagccggtgatcatcatcgtcatcggcatggccgggacggggaagacaacttttatgcaccgactggtatgccacacccaggcttcaaacatgaggggttatgtgctcaaccttgaccctgcggtgatgacgctgccgtttggggccaacatagatatccgtgataccgttcggtacaaggaggtgatgaaggagtatggtcttggccccaatggcggtatcctcacctctctcaacctattctccaccaagtttgacgaggttatatctgttattgaaagacgagccgaccagctggattatgtcctggtggacacgccagggcagattgaaatcttcacttggtcggcttcaggagctatcataacagaagcttttgcatcgacatttccaacagttgtcgcatatgttgttgacacccccagatcaacgagccctgttactttcatgagcaacatgctttatgcctgcagtattctgtacaagacccgcttaccgatgattctgacatttaataaggttgatgttgccaagcatgagtttgctcttgagtggatggaagactttgaggcgtttcagaccgccttggattctgactcatcatactcctctacatttacccgaagcctctctcttgtcctggatgagttttacaaaaatctgcggtctgttggagtatctgccgtatctggcgctggagtcaattcattttttgaagctattgaagcaagtgccaaagaatacatggagaattacagggctgatcttgacaagaggattgctgaaaaagagaggttagaggctgagcgtaggaaggagaacatggaaaggttgcaaagagacatggaaaactctaaaggacagactgttgtgctcagcactggtttgaaggacaaaaatcgtgctacggatatgatggatgatgctgatgaggaggaagaggaggcggcattagaagatttcaggatttctgaggatgatgaggatgaggatgaggatgaaggggaagatgaagaagtggagcattttggcttataa</cdnaseq>

Protein Sequence

<aaseq>MDVDSDPAAAGKPTQMDLEDQTDAKGKGKSEELADSIGSLSIGP ERTNFKKKPVIIIVIGMAGTGKTTFMHRLVCHTQASNMRGYVLNLDPAVMTLPFGANI DIRDTVRYKEVMKEYGLGPNGGILTSLNLFSTKFDEVISVIERRADQLDYVLVDTPGQ IEIFTWSASGAIITEAFASTFPTVVAYVVDTPRSTSPVTFMSNMLYACSILYKTRLPM ILTFNKVDVAKHEFALEWMEDFEAFQTALDSDSSYSSTFTRSLSLVLDEFYKNLRSVG VSAVSGAGVNSFFEAIEASAKEYMENYRADLDKRIAEKERLEAERRKENMERLQRDME NSKGQTVVLSTGLKDKNRATDMMDDADEEEEEAALEDFRISEDDEDEDEDEGEDEEVE HFGL</aaseq>

Gene Sequence

<dnaseqindica>156..215#320..446#582..808#1687..1977#2219..2424#2516..2795#atctcccttcccatccacgttcggccacttcctcctttctcaagctctctctcctctcctcgcagtcgcagcgcagtagtctctagggttttagcgggcggttgtcctccacccgctcgccgcgtggccgccgccttctccccgcgccaccgccgatggacgtcgactccgacccagccgccgcgggcaagcccacccagatggacctcgaggaccaggcatgccgccgccgccgccgcccgactcctccccacggggattctaccttcagtttttgattgtgactgttttttttttgcccctgatgatggaccctgtgcagactgacgcgaaggggaaggggaagagcgaggagctcgcggactccatcgggagcctctccatcggcccggagcgcaccaatttcaagaagaagccggtgatcatcatcgtcatcggcatggccggtacatcgatttcgcatgctgattggttcatcctttgatgtttagtggcaaccaacctgtcatacaatgagctcttgttgagtaattttgggattgggagctcaggcctcaagggtctcggtttatgtgatgtagggacggggaagacaacttttatgcaccgactggtatgccacacccaggcttcaaacatgaggggttatgtgctcaaccttgaccctgcggtgatgacgctgccgtttggggccaacatagatatccgtgataccgttcggtacaaggaggtgatgaaggagtatggtcttggccccaatggcggtatcctcacctctctcaacctattctccaccaagtttgacgaggtgtgcttttcgatcatcatatatttcatctccgtatgtgtttagatcaagtggttgttaggattgggttacttgaatgcacactatcaggaagtacttcaataccaagttaggcaatacttaggcaatttaatcacttcaatggtagtttgtatgcaacgatagttagttagggagcaacagaaatggacagtgaagagttcagcgataagtttcgacagttcaatttcattaatagtttctaaatagttcaagatttcacatatacacgcgtaatattcaattagaagtgttattgtcatgcagcacatagagattcccaaataaacttgcctagattgagtcctgttcccttaaaagatacaatgtaatgaatgctaatttaatttggtttataggaagattatcgtgcatgtatgctactaattggttctgcataggtaacttttcaattcttacctggagatgcttgcacagtgtctaattatggttctaatagctgtatggaatgtgtgtagggaaacactaaataatggtcatttctcaacaaactagcttattgatactgttggatggtcaacataatataaaattataatgtttaacaaatatgtcaataatgatataaaataaacataagggtagaaaatatgcccctagcccgtgcagatgcacgggttgatgactagtctagtaaatttgttaaaggaatgcagtctgcttatcatgttgatgggataatatttccacaattccatgtaaagtggttcagaaagcgagcttgctttttgcttactgcagtgtacagataaatttggttgacacatgatgcaattctgctaatgatcatatgtaacacctaataattgtctttacaggttatatctgttattgaaagacgagccgaccagctggattatgtcctggtggacacgccagggcagattgaaatcttcacttggtcggcttcaggagctatcataacagaagcttttgcatcgacatttccaacagttgtcgcatatgttgttgacacccccagatcaacgagccctgttactttcatgagcaacatgctttatgcctgcagtattctgtacaagacccgcttaccgatgattctgacatttaataaggttgatgttgccaagcatgagtttgctcttgaggtatgtttgccatctatgaatatctaattcctttgttgttgattctggacaccataagtgttgcatttcagtaatgcggtatcggcattatgcaacgactctctttggtatttaatcaagttgaaactgttgcacttgattgatatttgctcaaatttgattgggcctgttagttaattgtcttatctgtttttttccctacatcttctgtaaccagagattatgttgtttattttatcagtggatggaagactttgaggcgtttcagaccgccttggattctgactcatcatactcctctacatttacccgaagcctctctcttgtcctggatgagttttacaaaaatctgcggtctgttggagtatctgccgtatctggcgctggagtcaattcattttttgaagctattgaagcaagtgccaaagaatacatggagaattacaggtgttttaacttgcgatgtagtgctgctatctctgactgatatatgcatagcaaaaattatataagtggttgttataaaaaaacttttcagggctgatcttgacaagaggattgctgaaaaagagaggttagaggctgagcgtaggaaggagaacatggaaaggttgcaaagagacatggaaaactctaaaggacagactgttgtgctcagcactggtttgaaggacaaaaatcgtgctacggatatgatggatgatgctgatgaggaggaagaggaggcggcattagaagatttcaggatttctgaggatgatgaggatgaggatgaggatgaaggggaagatgaagaagtggagcattttggcttataaggtattaaaatattgctccgctggaatctgagttaccctaatgtactcacttgcagagctctattaaatttattaatctgagtatggtgtttctctgttccagatacttgaatgtcattttgctttgaatgttaatcgctgttactatctagttattcatttgaacct</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0312600, RefSeq:Os03g0312600