Difference between revisions of "Os03g0316900"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0316900| Description = Similar to NBD-like protein| Version = NM_001056475.1 GI:115452678 GeneID:4332655| Length = 2904 bp| Definition = O...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0316900|
 
GeneName = Os03g0316900|

Revision as of 19:34, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0316900

Description

Similar to NBD-like protein

Version

NM_001056475.1 GI:115452678 GeneID:4332655

Length

2904 bp

Definition

Oryza sativa Japonica Group Os03g0316900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:11446645..11449548

Sequence Coding Region

11446734..11446884,11446987..11447120,11447245..11447362,11448557..11448654,11448762..11448914
,11448993..11449070,11449152..11449382

Expression

GEO Profiles:Os03g0316900

Genome Context

<gbrowseImage1> name=NC_008396:11446645..11449548 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:11446645..11449548 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccaacggtggagatcagccacctctccttcacctacccgggcatcgacggccgcccgccgcccggcgcgccgccgctcatcgaggacgtctgcttctccctcgacgccggccaccgctgcctcctcctcggctccaacggcgccggcaagacgacgatactgaagatactgggcgggaagcacatggtggatccgagcatggtgcgggtcctgggcaggtcggccttccacgacacggcgctcacatcatctggcgacctctgctacctaggcggtgagtggaggcgcgatgttgcctttgcgggctaccaggtaaatatacagatggacatttcagcagagaagatgatatttggtgttgtgggcgttgatcctcaaaggagagatgagcttatcaagattttggatattgaccttgcctggcgcatgcacaaggcatccgatggtcaaaggagacgggtccaaatttgcatggggcttctcaagccattcaaagttcttcttcttgatgagatcacagtagatctggatgtgttggcaagagcaaatctattgacatatttaaagaaggaatgcgaggaacggggtgctacaatcatctacgcaacacatatttttgacggacttgatgattggccaacacacattgtgtacattgcccgtgggaagttgcaactagcactgcctttagagaaggtgaaagaaatgagccagttatctctcatgagaacagtggagagctggctgaggaaagagagagatgaggataggcggagaagaaaggaacggaaggagaagggcctcccagagtttgacaaggttactgaggggagtcgggttataggtgatcccgctgccagagcggtgaacaatgggtgggcagcagggaggctcgcctcaacggttgctggtgaagagaatttcattttcagctctaacagcgttcttaggcaataa</cdnaseq>

Protein Sequence

<aaseq>MAPTVEISHLSFTYPGIDGRPPPGAPPLIEDVCFSLDAGHRCLL LGSNGAGKTTILKILGGKHMVDPSMVRVLGRSAFHDTALTSSGDLCYLGGEWRRDVAF AGYQVNIQMDISAEKMIFGVVGVDPQRRDELIKILDIDLAWRMHKASDGQRRRVQICM GLLKPFKVLLLDEITVDLDVLARANLLTYLKKECEERGATIIYATHIFDGLDDWPTHI VYIARGKLQLALPLEKVKEMSQLSLMRTVESWLRKERDEDRRRRKERKEKGLPEFDKV TEGSRVIGDPAARAVNNGWAAGRLASTVAGEENFIFSSNSVLRQ</aaseq>

Gene Sequence

<dnaseqindica>90..240#343..476#601..718#1913..2010#2118..2270#2349..2426#2508..2738#acgcttctctcctcctcctcctcagcccttaccaaccaaagcaaaccttccccctcctcctcctccggccaccgcggcgagaggccccgatggcgccaacggtggagatcagccacctctccttcacctacccgggcatcgacggccgcccgccgcccggcgcgccgccgctcatcgaggacgtctgcttctccctcgacgccggccaccgctgcctcctcctcggctccaacggcgccggtaactccactaccctttcaggaccgtccgtcctttccttcctctctccggttcgggttctctggtcgcggggtctgattttgggtggatgctggggggtaggcaagacgacgatactgaagatactgggcgggaagcacatggtggatccgagcatggtgcgggtcctgggcaggtcggccttccacgacacggcgctcacatcatctggcgacctctgctacctaggcggtgaggtgggggctggtgttttacggagttacatttctatgttttggcgggtaatggcatatgcgccaattttgctctcagttgatctgatgaatctaatcgactattttttttgtgaattgggttcagtggaggcgcgatgttgcctttgcgggctaccaggtaaatatacagatggacatttcagcagagaagatgatatttggtgttgtgggcgttgatcctcaaaggagagatgagcttatcaaggcaagcttatattcactcgcagcatattcatcaccatattgcgtttcatgggaagttctcattcgacttgcgaaattgacacagtgaaagacgaaaacttaagtttaatactattagctctatcattttcgtgcatctatattctttaccaattatctagtgtgtgatatgtagaaatgtttactcctatttgtttatatgatttcatttttttttaattttaccatgggtgtatttcctccatgtcccattgattaacggaaaatatagaagtttgcaaggttggggaataaactaggtgaaagatcctactacctaagcatatgcattggtgagaggctggtaggattctatttgcccccacaaaccattgatggagctagtaaaaataaatttcatatgggctatcaattatgttagcagtgatcatgcatcctaaaggtatccacacacacagctctattttgcatggtcatacacttgcatgttctcaccagccacatactaagtaaccaactgaaaacaaaccaattctggtagtaataaagtattgatgaatgtattccagctgatatcattaggtgaagcatgggtaaatgttactgttgtgctacaaagaattcatgtaatgaagataatcatttacatgttcagcaagcttaagtatgccatctgatagcattatggcctcatgggtatagaaacatctttggtatagtattcccgaaaaaaaaaggaaacatctttggtatatacctttgaggagggaacacaatttggaaggtcctggggatatggatgcacagatctgtaaatgcaaagttttttgttgttcagtgagagaacagttggagaagatctaagtatttcttttttcatacccaagtaaacacttgtaaacaaaacctttaattgttgcaattaatcttaaatgactttaagacttctatgtcattggttaattcacatataagtacatagcatacctaatcaagcttaatatagatgagccaaataacctaagataagccctaacatatatttaggtaaactcagtttgctagttcttgtactcattagagggtgtatgtgctgatcctttgacctttacttaggacaatgcaactataaccctctgtttgtactcatgacctattcatttaaccttccttagttcctttttccactctacagattttggatattgaccttgcctggcgcatgcacaaggcatccgatggtcaaaggagacgggtccaaatttgcatggggcttctcaagccattcaaagtttgtttcatcttgctggttatggaaaagatgtgccatgtttgtaatttgtatccaaacaacaaggtgctaacacgaattttcttttatttattttttgaattcaggttcttcttcttgatgagatcacagtagatctggatgtgttggcaagagcaaatctattgacatatttaaagaaggaatgcgaggaacggggtgctacaatcatctacgcaacacatatttttgacggacttgatgattggccaacacacattgtgagccttctcactatacatttctaggctgaagttttttgtgtaatattgaagattattgtttctattggatttcaggtgtacattgcccgtgggaagttgcaactagcactgcctttagagaaggtgaaagaaatgagccagttatctctcatggtaagtagcattcatctgacaaaatagtatgttttagcatgatgtgtatgttcatctgattttgctgcattttgacctcagagaacagtggagagctggctgaggaaagagagagatgaggataggcggagaagaaaggaacggaaggagaagggcctcccagagtttgacaaggttactgaggggagtcgggttataggtgatcccgctgccagagcggtgaacaatgggtgggcagcagggaggctcgcctcaacggttgctggtgaagagaatttcattttcagctctaacagcgttcttaggcaataatcctaccctgcaatttggctttgtaatgatgaataacgatcctatagatccaatagatcacaccatcccacaggagtttttgcagtaacagcctaacaggctaacagcaaagttcttgtatacaactgctcaaagattattttcaaaaatttcgccttcttttatg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0316900, RefSeq:Os03g0316900