Difference between revisions of "Os03g0349000"
(Created page with "{{JaponicaGene|
GeneName = Os03g0349000|
Description = Nucleoporin interacting component family protein|
Version = NM_001056641.1 GI:115453010 GeneID:4332834|
Length = 901...") |
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| Line 1: | Line 1: | ||
| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0349000| | GeneName = Os03g0349000| | ||
Revision as of 19:35, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0349000 |
|---|---|
| Description |
Nucleoporin interacting component family protein |
| Version |
NM_001056641.1 GI:115453010 GeneID:4332834 |
| Length |
9017 bp |
| Definition |
Oryza sativa Japonica Group Os03g0349000, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:13152323..13161339 |
| Sequence Coding Region |
13152705..13152782,13153483..13153774,13153871..13154049,13154339..13155241,13155320..13155406 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:13152323..13161339 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:13152323..13161339 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccggcgtcggcggcagcagcagcggcggcggcgacgtggagatgggcgggtggtcggagctcctccactcctccactaagctcctcgagcaggccgcccccaccccgcacttccctcccctccagaggaacctggaccagctggaggtgctctccaccaagctcaaggccaagacggtgcgcgccgaggcgcccgtgcagtcgctctccgccaccaggttgttggcgcgcgaggggatcaatgcggagcagctcgccagggacctcaaatccttcgaacttaagaccacatttgaggatgtttttccatctgaagcaactactgtcgaggagtacctgcagcagcttcatgaaatggcaatcgtctcatccattcaagaagcacaaaaggacaacttaaggagttttaacaattatatgatgcaagttctcgaggatgattggcagaaggagaagcgagacttcttgcagagtctaagccgactctctacattaccgaaaagaaacactaatctcatggccagtgggatttctcgtcctgctctgatgccatcttcagcttccagtccccaatcttcgtccggtctgccatctaaggaagtcatgcccatacctaacaaaactataattgaaaacaaatcttcagtttatgctgcagttgtgagagatcttaatgatgctagagggcgcagcctaccttttggtcctgctacagcattcagggctgcttatgagtctttatctgttggtgctattgggacaaaatcagtgaccatgcataaagtgtggcatttaattcaggcattagttggggaagggtcaactcatcgaaacatttcaagaaaaatgtcactagtgattggtgctagacgacaccttgagtggggtcatgaaaagtacatacttgagaccatcaatagccatccggctctagctgctcttggtggatctgttggcaatcttcagaagattcgcgcatttcttcgggtccgtttgcgggatcatggtgtgctagactttgatgcaactgatctgcgtagacagccaccagtggacacaacatggcaacagatttatttctgcttgagaaccggatactatgatgaggcaagacaagttgcccaatcatctcgtgctgcattcaactttgctcccctgcttgtagaatggattactactaatggtgctgtatccccagagactgctctgacagcttctgaggaatgtgacaaaatgctgagaatgggtgatcgacctggccgtcctggttatgataggaagaagttgctcctttatgccatgatctgtggttgtcgacgtcaaatcgacagattgcttaaagatctgccaacacttttcaatactatagaggatttcttgtggttcaaattgtcagctctgcgggagtacaccagtgcatcttcttctaatgtttcaaatgaaggcttggtgccttatactctggaggatctgcaaagttacttaaacaaatttgaaccatcatattatacaaagaatggaaaagaccccttggtctatccatatgttctgctgttaagcatccaattgcttccagcaattctttatttgtctaaagaagttggagaggaaggataccatgtagatgctgtgcatatttcaattgctttatctgatcatggtgttctccctgatggtgttgggtcaggccagaagatgggtatcatggatgcttgtgcagaagctgccagtataatacggcagtatggctctatttatttgcgtaatggtaaccttgatttggccttggagtattatgcacagtctgctgctgcaatgggtggaggagaggtatcatggattggtcgagggaatgctgatcagcagcggcagcgaaatctaatgttgaagcaactgctgacagagatattactaagggatggtggcattcaacttttgcttggtccaagtggaatgggggaagaaggagaattaaagaagtatatgatggattggagaagcaggcagcaattcttacttgaagctgcccatcagtgtcatgaggcaggcctctatgacaaatcagtggaaattcataaaagagttggagcttttgccatggcacttcagacaataaataagtgcctgtcggatgcaatatgtgccatggcacgcagtatgttagatggtgaaagtcgtgctgctgctctaattcattctggtaatgaaattatggaaactgccagatattcggaagccagtgttcaagacaaggacctcatatctgagcaacaaactgtactgagacagcttgaagctattctccatatctataggcttgctcgagctggacagactttagatgctttgagggaaaccatcaaactcccatttcttcatttggatcctcaggctccaaatgtgacagttgatgtgttcagaaacttgtcaccgcatgttcaagcttgtgtgccagatctcttgaaggttgctctaaattgtatggacaatgttagagatactgatgggaccttgcgtgcagtcaagtcaaagatcgcaaacctcgtggcaagcaacatgagcaggaactggccacaggatttgtatcagaaggtggcgcagtgcatatga</cdnaseq> |
| Protein Sequence |
<aaseq>MAGVGGSSSGGGDVEMGGWSELLHSSTKLLEQAAPTPHFPPLQR NLDQLEVLSTKLKAKTVRAEAPVQSLSATRLLAREGINAEQLARDLKSFELKTTFEDV FPSEATTVEEYLQQLHEMAIVSSIQEAQKDNLRSFNNYMMQVLEDDWQKEKRDFLQSL SRLSTLPKRNTNLMASGISRPALMPSSASSPQSSSGLPSKEVMPIPNKTIIENKSSVY AAVVRDLNDARGRSLPFGPATAFRAAYESLSVGAIGTKSVTMHKVWHLIQALVGEGST HRNISRKMSLVIGARRHLEWGHEKYILETINSHPALAALGGSVGNLQKIRAFLRVRLR DHGVLDFDATDLRRQPPVDTTWQQIYFCLRTGYYDEARQVAQSSRAAFNFAPLLVEWI TTNGAVSPETALTASEECDKMLRMGDRPGRPGYDRKKLLLYAMICGCRRQIDRLLKDL PTLFNTIEDFLWFKLSALREYTSASSSNVSNEGLVPYTLEDLQSYLNKFEPSYYTKNG KDPLVYPYVLLLSIQLLPAILYLSKEVGEEGYHVDAVHISIALSDHGVLPDGVGSGQK MGIMDACAEAASIIRQYGSIYLRNGNLDLALEYYAQSAAAMGGGEVSWIGRGNADQQR QRNLMLKQLLTEILLRDGGIQLLLGPSGMGEEGELKKYMMDWRSRQQFLLEAAHQCHE AGLYDKSVEIHKRVGAFAMALQTINKCLSDAICAMARSMLDGESRAAALIHSGNEIME TARYSEASVQDKDLISEQQTVLRQLEAILHIYRLARAGQTLDALRETIKLPFLHLDPQ APNVTVDVFRNLSPHVQACVPDLLKVALNCMDNVRDTDGTLRAVKSKIANLVASNMSR NWPQDLYQKVAQCI</aaseq> |
| Gene Sequence |
<dnaseqindica>8558..8635#7566..7857#7291..7469#6099..7001#5934..6020#5341..5424#5157..5210#4531..4662#4306..4401#3788..4057#1765..1854#1617..1676#557..623#324..415#78..206#gctccactcccccctccgctccgccgcaccacgccctacgacaccaaccaaaccctcctcctagccccccggcggcgatggccggcgtcggcggcagcagcagcggcggcggcgacgtggagatgggcgggtggtcggagctcctccactcctccactaagctcctcgagcaggccgcccccaccccgcacttccctcccctccaggtgcgccgccgctttcctctcccgttcctcccccccgcatctgcctcctcctcctccgccgccgccatagcttcttccgcctgacgtgttcccccgtgtgcttgtccccgcgcgcagaggaacctggaccagctggaggtgctctccaccaagctcaaggccaagacggtgcgcgccgaggcgcccgtgcagtcgctctccgccaccaggtcggtgtcttctccccggagccccccttcgatttgcctcggcgaggctcgcagcgcggttctccgcgtcgggttcgtcgggggtaggcggttgttgggggtttacgggggacttagggttttgggctttgctttctgcaggttgttggcgcgcgaggggatcaatgcggagcagctcgccagggacctcaaatccttcgaacttaaggtgatggccggcgagggatatcccatttcatagagtgatattatactaatctcatttgctgattatcagatcgagcagtttgtccggtttgagattagacattttactgtactgctggttaaaacctagggttatcacaaagtagggttaaaacgtaataaaattataacaagtcataagcattgccatgttttattccttgcaccaaattgttgaaaaacatcctttacaatttcaaatgaagaagtgaagatgatagtttggtgtttgttaccaatacatcatgtcttcttaaattggaagagcagtttaacttactagtaaatagtttagttcagtagttttgacgaaatgtttagttagtatctgtgagctagctttggtgaaatagttacccatgaactatgttgaaacaagaaacgactctagagttcgaggtgcagcaagatctcgttggtcctatactttcaattatactgctccagattagcgttcaattttctacttaaattgtagaagaaacttaacatacagttatctacttgagtaagaaattgatagctcatatttctatgctttatctatgcaatgttctctttgtgtatttaaatgcagctaatataacgatagcatgtattcattataataatagtgtaagaatcagtcctttcctattgggtaaatgctactattttttgcttggatcagcgggctcttgatataaaaaacttgaccggaaatcattactcaataacagcgcacgatttttcgcacttcaccttatatatccaccataactttactgttcactatgtatgccccatgtcccattctctaaaattcactcctaattcatcagtataccttaatacatttacaactctgttgctgtatgtgaatctgcagcttcttattgtatattttctgttttctactctatcttgctagactacttgaatatacatcatagtgattaaaattgaggttttgtagaccacatttgaggatgtttttccatctgaagcaactactgtcgaggagtacctgcagcaggtgcacacttcataccgtcatacatcttttacatgcattttctcctaatttcatggaatatatcctgaaacatgtcatgtgttttcagcttcatgaaatggcaatcgtctcatccattcaagaagcacaaaaggacaacttaaggagttttaacaattatatgatgcaagttctcgaggttgtttaccctttcctgctgctaacttcattacatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatactagcaaaagtgcccgtgcgttgcaccgggtgattacggagtgtgtatattgaccaaaagtgttgtttggtctagcaaaagtgcctgtgtgttacaatgtgaagcgtacagattagaaaaatatgcaattaattaaaatacaaattcgctgaaatatttggtatttttaagtaggtatgtgtataattaaataaatttacaagtaaagcaagtgtgagaaataaaatgacatggttaaatttaatttttttttttaaattctccatgattagttacgctctttgaaattatatttgaatttttcagagcttaattgttaattttattaatacaaacgtcatttaacaattatttacttggaaaaagaaagaaaatacttccttttaggtttgcttcgaaataaacacattcaataacttataattgtaatgcttctgaaaaaatgagcactaaaaatgaacttattctctttttttgggcctgagggacctaaaatagacttatttccggcccttgccggtcggtccacggccttttgtgcacgcgcaagtgcacttcccctccccaggccacaacctgggcttgggccagaaaagtggcctcactctcgatccctcttgggctgatttcggcctggacgacaccgatcgtccgatctttagggttttgatcggacggccgagcgtcgatatcggggaaacaaaacccctccttctcctcagccgccgaaaccctagcccatttccctccctcccatctcacatcgccgccctcccctccgcgcccccgagcggcggcggcggcgccctcccccacaaccaacggcgcggcgccctctccccgaacaacggcggcgtggaggcggctgcggcccggcgggagcgggaggggcggcgggccggacctcgcctccgccagatctggcggcatggaagcggctgtggtccggcgagggcaggagaggcggcggcgtcgtctctttctctctctctctgtgcatggtggggaggtgcggcagtggtggtggtggcggacgtcatggaacgctggttgggcctcgcctccgccagatccggcggtgtggaggcagctgcagcccggcgggggtgggaggggcggcgggccggacctcgcctccgccagattcggcggcatggaggcggctgcggtccgacgggggcgggagaggtggcggcgtcgtctctttctctctctctctgtgaatggtgtcggttctcctggtgatgctaaccgaataggacttggtataacagatgggagtttgtttcctatttttgtggaatcggacatattctttttttttcccgatttttcttttaccgcgttgatgaatcggattcgttccggttttttttcacccggtttttttgacggacgatggaagcacctcttattttttaagtagtagtagatatatatatatatatatatatatatatatatatatatatatatatatgatctggtttagttgttgcaagcctgtgggaagtgcttttcagattgcactttcttatatcatcttggtatatgttaaaagtttctcggcaaatttctgtatcatctgggggtttgtatatgttattacctatatgtattattgcattgcacattagaaaacaaaatcagttgtcatagggttgtgaacttgtgatttgatttaattgaacagtacagtactaccatttcaggtaactaagatgtctacatttttcagtgttatattggtcttgtactcctatgtcgctcagtggtgaatgtttcaaattattttacggtttggttctcaacttatataacatctatgttgtaggatgattggcagaaggagaagcgagacttcttgcagagtctaagccgactctctacattaccgaaaagaaacactaatctcatggccagtgggatttctcgtcctgctctgatgccatcttcagcttccagtccccaatcttcgtccggtctgccatctaaggaagtcatgcccatacctaacaaaactataattgaaaacaaatcttcagtttatgctgcagttgtgagagatcttaatgatgctagagggcgcagcctaccttttggtgtaagtgttaaactcatatgctatgattcaacatgttacttagtccctctatggacatttattcatttatagattgaatttgtggtttttgctatccatagttctattctccaaataatttaatttgagaaatagatcaagtgcctttttttttatgtagcctcgacatgttatcatcagagcataagcaaattctattgatgtacttgtagttctgctaatgcttattaaagttatcttttggttagcctgctacagcattcagggctgcttatgagtctttatctgttggtgctattgggacaaaatcagtgaccatgcataaagtgtggcatttaattcaggtaataaaattgatttttgtgtagcactcatgctgacatctgttggcccttttccatccaatatatatgatatatccttatctattattccctcatagctatactttgcttcttgtttgtcttattcaggcattagttggggaagggtcaactcatcgaaacatttcaagaaaaatgtcactagtgattggtgctagacgacaccttgagtggggtcatgaaaagtacatacttgagaccatcaatagccatccggctctagtgagtattttcacatactttttagttctgacatttctttcaaaattccttatgaaaatagaatataacatgtaagattctgacaataattttggtgttgatccaactgaactcttgagagttactacacctgttttcttatgttgcctatgggtattccactcttttgtgtcatgtcaccttagttcatatttttgagcattaattttctttcttgaatgtcctgaaggtgaattgtgatgtgatatgtgctttctaccaattgtgcatatttatggaagataatatttaatgttagtgagcaactcagaatagttcattattttttgattttttaacacatggttgtgatcttccattagtcttttagcaaatgatgttccctactctcactttactatgtggcttatgttttaggaaacctactcatgcaagagcttttctgttgtatcaatagatcttaattaagctgtgattgtgctttatggttgtaggctgctcttggtggatctgttggcaatcttcagaagattcgcgcatttcttcgggtatgttttaaatttgatgcttctctcccttttcattgtttctgtacatcattttattttcaagtgaaatgatgctgtacaatttgggttctacatgagcttcatgcatctttgtccttatgactggcaggtccgtttgcgggatcatggtgtgctagactttgatgcaactgatctgcgtagacagccaccagtggacacaacatggcaacaggttccctttttagttttgggtatttaacacaaaattgcaattggtgccatttcaatctgtctagtaatggcatattaaaatcatgaaaaaacaattggttacattcaaataaaaccgtgccaccaaaatacagtaagtgcagcaactgaagaatactggagcttttatgagaacatcgtgttgaatatagtgcaacactggggccatgagtgtttttattattcattatttttcaactctagcttaggcttttcatggtatcattcctatgctaggtcaattcggcttattctatgacttactttattcaagtgtaggctataatactctaaagtaaagccatatctgatgcataaaaagttttctgtgggtacatgtgctttattctaatttatcaacaaatatttctcagttgcgccttcatggaatgttctctctctttgattttcatgtaacttgttaatcttgtactgctaacattgaagtattattgtttgacatttttttagatttatttctgcttgagaaccggatactatgatgaggcaagacaagttgcccaatcatctcgtgctgcattcaactttgctcccctggtaaactattgacatgtcataaattgcgatgagttcttgttcttgataccatacatgcaaataatatgttctttgcagcttgtagaatggattactactaatggtgctgtatccccagagactgctctgacagcttctgaggaatgtgacaaaatgctgagaatgggtgatcgacctggccgtcctggttatgataggaagaagttgctcctttatgccatgatctgtggttgtcgacgtcaaatcgacagattgcttaaagatctgccaacacttttcaatactatagaggatttcttgtggttcaaattgtcagctctgcgggagtacaccagtgcatcttcttctaatgtttcaaatgaaggcttggtgccttatactctggaggatctgcaaagttacttaaacaaatttgaaccatcatattatacaaagaatggaaaagaccccttggtctatccatatgttctgctgttaagcatccaattgcttccagcaattctttatttgtctaaagaagttggagaggaaggataccatgtagatgctgtgcatatttcaattgctttatctgatcatggtgttctccctgatggtgttgggtcaggccagaagatgggtatcatggatgcttgtgcagaagctgccagtataatacggcagtatggctctatttatttgcgtaatggtaaccttgatttggccttggagtattatgcacagtctgctgctgcaatgggtggaggagaggtatcatggattggtcgagggaatgctgatcagcagcggcagcgaaatctaatgttgaagcaactgctgacagagatattactaagggatggtggcattcaacttttgcttggtccaagtggaatgggggaagaaggagaattaaagaagtatatgatggattggagaagcaggcagcaattcttacttgaagctgcccatcagtgtcatgaggcaggcctctatgacaaagtaagtaaacaagtaaatgctcttttcttgtgatagtagtagtaaaaactcgtcttgattgtcacatgtaggacatatcacacatgcttcatcaaatctgatatatgtgcgtgcattttaaccgttgactataattttataaactattgatggcaagctacatggtacagaagtagatatttaccatatgaatttgaagatgtctatgttttctgcactttggtcttactctctttgttgagttgttctatatccgtctaatatcactttacgctctgcatgagctcagtcagtggaaattcataaaagagttggagcttttgccatggcacttcagacaataaataagtgcctgtcggatgcaatatgtgccatggcacgcagtatgttagatggtgaaagtcgtgctgctgctctaattcattctggtaatgaaattatggaaactgccagatattcggaagccaggttattatcctcttctgttttttcacaagttgagcattaatcctttatgctttttaaagctgtgttttgatcaatttattggaaacgttcttacagtgttcaagacaaggacctcatatctgagcaacaaactgtactgagacagcttgaagctattctccatatctataggcttgctcgagctggacagactttagatgctttgagggaaaccatcaaactcccatttcttcatttggatcctcaggctccaaatgtgacagttgatgtgttcagaaacttgtcaccgcatgttcaagcttgtgtgccagatctcttgaaggttgctctaaattgtatggacaatgttagagatactgatgggaccttgcgtgcagtcaagtcaaaggtattcaatctcttttgcgcatttacttatacaatgagcatgtaggcactgcacttcataatggcagagaaaatgtgatgctaaactaccatagataagtaaactataaataatttgaagaacctgtttagtaacacatccacataccttaactagcaggttataccactcgcaagcattctcttgtgtgtgcacacagacagttacgtacctgatggctgattgcagttgggcagtcttatgctgatacatgtctttagctgttgtagttgtaaagattgctgtcacggccgtaaaccttgcggcccagcctgtgggcccaagaagcacttaaaatattctatagagagcttgcacaagaaagttttccaacaatgtccaatcttagtgtaaaatctggtcatatcatgacgcactacgctgctaaatgctagctatctgccacatatacacatccttctggagactttcattgtcaaatggcaagcttgaccacgtccattaaccttgtttttaatacatttttatttcaaataagttatctggatgaccgcagaggagggcaccatgctgtgttatcacgttttagacatgcattaatttaatttcttttagttagcattattctgatattatctcgctataatataaaatgcaaccccctgcatttttttcatgcaatatttttcatgatgggcagatcgcaaacctcgtggcaagcaacatgagcaggaactggccacaggatttgtatcagaaggtggcgcagtgcatatgatggggatctgtccggccatatacctgacactatcaaaagcttccgaaagcacgcggaaatgcttttctgtgtttgtgctggtgatgtgcttatggtccgaaccggaatgtttcagactggtggatgcaaatccttttgatcactcagctatatcagccaaaagagaacatatatgccatgcccgggggtcatctgatgtgtagtgtgtgaaatgtgaaacttaatggcaccaatcagaatctgtattattaatccatggttgtaaagcagtttctgaatatccaaatgcactgttgcttagttcgaggagattatctgcggctctattgtactgtcattctgttggcttatcccacttaatcccgcgtcctatctcggatct</dnaseqindica> 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