Difference between revisions of "Os03g0388900"

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(Created page with "{{JaponicaGene| GeneName = Os03g0388900| Description = Peptidase C14, caspase catalytic domain containing protein| Version = NM_001056802.2 GI:297601017 GeneID:4333009| Le...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0388900|
 
GeneName = Os03g0388900|

Revision as of 19:36, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0388900

Description

Peptidase C14, caspase catalytic domain containing protein

Version

NM_001056802.2 GI:297601017 GeneID:4333009

Length

1530 bp

Definition

Oryza sativa Japonica Group Os03g0388900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16081875..16083404

Sequence Coding Region

16081918..16081977,16082117..16082308,16082392..16082796

Expression

GEO Profiles:Os03g0388900

Genome Context

<gbrowseImage1> name=NC_008396:16081875..16083404 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:16081875..16083404 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgatgaactggctggtgcaggggtgcagctccggtgactcgctggtgttccacttctccgggatcggggtgcaggtgccggacgacgacggcgacgaggtggacgggtacgacgaggcgatctgccccatggactcgttcagccagggccccatcctggacgacgagatcaacgaggccatcgtccgcccgctcgtccacggcgccaagctccacgccgtcgtcgacgccgagcacagctccaccgtcctcgacctccccttcctctgctgcctctcgtccaggtccggcggctggcagtgggaggaccaccgcccgcccaccggcgcctacaagggctccagcggcggccaggccatgctcttcagcggctgcagcgacggcaacaacaagcatagcctgctgccggaggcgtcgacggtgggggccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgcgccacctacggcagcctgctcaccaccatgaggagcatcatgcgcgacggcggcgtcacctgcaacctgcagggccccatcggcgcccccatccgcaaggtcgccaacttcagcggcatccaggagcctaacctgtcttgctctgagatgttcgacatctaccgcaagccgttcgtcctgtaa</cdnaseq>

Protein Sequence

<aaseq>MAMNWLVQGCSSGDSLVFHFSGIGVQVPDDDGDEVDGYDEAICP MDSFSQGPILDDEINEAIVRPLVHGAKLHAVVDAEHSSTVLDLPFLCCLSSRSGGWQW EDHRPPTGAYKGSSGGQAMLFSGCSDGNNKHSLLPEASTVGAMTHSFIKAVECEPRAT YGSLLTTMRSIMRDGGVTCNLQGPIGAPIRKVANFSGIQEPNLSCSEMFDIYRKPFVL </aaseq>

Gene Sequence

<dnaseqindica>1428..1487#1097..1288#609..1013#gtgagatcgctcgagactaacaagcaaactaacgtagttgctagctagctctagctatctcggcaatggatcacttcggcggacgtgctctcggcttcggcggtggcggcggctgcggcgcggtgcggtgcaggcactgcagcgcgtccctcccggctatgcctggcgcccgcgtcatccagtgcgcgcagtgctacggcgtgacgcgcgtcggcggccgcggccggcgccgccaccccaacccggtcgagccgtggcgcccggccgtgccgatgcccgtggccggcggcggcttcttcccgggctcccgcggcaagaagcgcgccgtcctgatcggcatcacgtacgccggcatgcggcggcgcggcagccagctgatgaggggccccgtcaacgacgtcaagtgcatgcggtacctcctctgcgagcgcttcggcttccccaacgactgcgtcctcatcctcaccggtgagccacccacagccaccctctcacctcacctcgctcgccggccggccatggtggattgactcactcactgggattgattaattgttgtagacgaggagaaggacccgtgcaggttggcgacgaaggagaacatcaggatggcgatgaactggctggtgcaggggtgcagctccggtgactcgctggtgttccacttctccgggatcggggtgcaggtgccggacgacgacggcgacgaggtggacgggtacgacgaggcgatctgccccatggactcgttcagccagggccccatcctggacgacgagatcaacgaggccatcgtccgcccgctcgtccacggcgccaagctccacgccgtcgtcgacgccgagcacagctccaccgtcctcgacctccccttcctctgctgcctctcgtccaggtccggcggctggcagtgggaggaccaccgcccgcccaccggcgcctacaagggctccagcggcggccaggccatgctcttcagcggctgcagcgacggcaacaacaagcatagcctggtcagccaccattgccaacatcgattgattgatccttctcttgatcttgcctgacgacgacgatcgcgtgcactgcactgcagctgccggaggcgtcgacggtgggggccatgacgcacagcttcatcaaggcggtggagtgcgagccgcgcgccacctacggcagcctgctcaccaccatgaggagcatcatgcgcgacggcggcgtcacctgcaacctgcagggccccatcggcgcccccatccgcaaggtcgccaacttcagcggcatccaggtacgttctccatagcccaatttaaattcgacttctagaagttacaacaaaaaaaattaaattaaattaaaaatagttatcgtacattcgtagttatatttgcatctctgaactgattctgtccattttttgcatgcaggagcctaacctgtcttgctctgagatgttcgacatctaccgcaagccgttcgtcctgtaaaaccgctaggcccgacaccatggacaataacattattattatt</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0388900, RefSeq:Os03g0388900