Difference between revisions of "Os03g0405100"

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(Created page with "{{JaponicaGene| GeneName = Os03g0405100| Description = RpsU-divergently transcribed family protein| Version = NM_001056863.1 GI:115453454 GeneID:4333072| Length = 5995 bp|...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0405100|
 
GeneName = Os03g0405100|

Revision as of 19:36, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0405100

Description

RpsU-divergently transcribed family protein

Version

NM_001056863.1 GI:115453454 GeneID:4333072

Length

5995 bp

Definition

Oryza sativa Japonica Group Os03g0405100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:17216119..17222113

Sequence Coding Region

17216185..17216553,17216659..17216766,17220387..17220554,17220646..17220817,17221504..17221577
,17221676..17221756

Expression

GEO Profiles:Os03g0405100

Genome Context

<gbrowseImage1> name=NC_008396:17216119..17222113 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:17216119..17222113 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcctccctcgccgcgcgccgcctcctctcccgctccgccgccgccgcgtcccgccgcctcgtcccctgcgcctcgtccgcgaccccgcgcgctgcccccgctgctctgcgccgcttcttctctgcggaagcctcgacgccgccaccgacgccgccgacgccaccactcccgccgccgcctctggagcccaccgtcgagccgcccaagtcggagggcgcctcctcctcttccgcctcgtcttccgccggcgccggaggagcccatcggtcggcgccgggggcctcggcgggggctcgccgcgccggcggcacgggctacgaggaggagcaggagaaagtgctccgcgcgtcgctgctccacgtgccaaggatggggtggagcgagtcagccatgatcgccggggcgagggacgtgggcgtgtcgccggccatcgtcggtgctttcccgaggaaggaggctgcgctcgttgagtttttcatggatgactgccttcaacaactcattgatcgcattgatgctggagagggagagctgttgaagaacttggtactgagtgagagactttccaaacttgtccgaatgaggctggaaatgcagggaccttatatatcaaagtggcctcaagctctcagtatccaatcccaaccagcaaacatttcaacaagtttaaagcagagagctgtccttgttgatgagatttggcatgctgctggagatgctggatcagatattgattggtatgtgaagcgtactgtgcttggtggtatctactctacctcagaggtgtatatgttaactgacaattctccagatttccgcgatacatggacatttgtgagccgccgtatcaaggatgctcttgatcttcagaaaacttttcaggaggccgcgtatctagcagaagccgtcggtgcaggcatggggggctccctacagggtgtcctgaacagacttttcaagaaatga</cdnaseq>

Protein Sequence

<aaseq>MASSLAARRLLSRSAAAASRRLVPCASSATPRAAPAALRRFFSA EASTPPPTPPTPPLPPPPLEPTVEPPKSEGASSSSASSSAGAGGAHRSAPGASAGARR AGGTGYEEEQEKVLRASLLHVPRMGWSESAMIAGARDVGVSPAIVGAFPRKEAALVEF FMDDCLQQLIDRIDAGEGELLKNLVLSERLSKLVRMRLEMQGPYISKWPQALSIQSQP ANISTSLKQRAVLVDEIWHAAGDAGSDIDWYVKRTVLGGIYSTSEVYMLTDNSPDFRD TWTFVSRRIKDALDLQKTFQEAAYLAEAVGAGMGGSLQGVLNRLFKK</aaseq>

Gene Sequence

<dnaseqindica>67..435#541..648#4269..4436#4528..4699#5386..5459#5558..5638#ccgcctcgccatttcttcgagcaggtgaggcgcacgcgcacttcgccgctccgctgcacccccacgatggcctcctccctcgccgcgcgccgcctcctctcccgctccgccgccgccgcgtcccgccgcctcgtcccctgcgcctcgtccgcgaccccgcgcgctgcccccgctgctctgcgccgcttcttctctgcggaagcctcgacgccgccaccgacgccgccgacgccaccactcccgccgccgcctctggagcccaccgtcgagccgcccaagtcggagggcgcctcctcctcttccgcctcgtcttccgccggcgccggaggagcccatcggtcggcgccgggggcctcggcgggggctcgccgcgccggcggcacgggctacgaggaggagcaggagaaagtgctccgcgcgtcgctgctccacgtggtatcgtttcgggctccctcgagatctgcttccatttccgcctatctagcagcgtagtgagtaattttctgaacgtctggttgatggtttggttgtgcgttgtagccaaggatggggtggagcgagtcagccatgatcgccggggcgagggacgtgggcgtgtcgccggccatcgtcggtgctttcccgaggaaggaggctgcgctcgttgaggtaactttgcttacggtggtgggactatcttgtgtatctttttcaatcggtggtgattcgcaatgttcttggcaagaaaagaatattctgggatgctagtacattgtactggagaggtaaggaggggacatagtgatagtgtactcgaggtatgatgatttggatatgcatctattgaatttggatcagaacctataggtagctaacacaacgaatgctgtcagtcattgcctcattggtatgataattgttgtgcacctaatggatgatgctcgtgatgaacatgagtgcttcaagtttgtgatgtgattcacgacttctattttgtgaactgatattagcacttgtagttgtagaatgtagataaaccttccaggcaagcgttgttgtactacatggataaaagcatgaataatttgtacctagaagctactagagtgttataactgtgatatatggattatttcacattcataatagggcttgtggtatctgttgagaatatcttagattattcttaaagttggttcatgactgaaatgaatagattttggattaaacttaattacgttcatatcttgattctgaaaatgctaatcaattgtaaataaggtgatcataaaagtcagacctgcttgatatccagacccactttaggtttgggaatgttgtggtgttgtttttgcttggaagtatagtgacatgtatttcgggaatacatagacaaatccctatctaaatttggtagtaggggtcctgtgcacttaaattgcacatttttattgttgaatatacatgctttgtgttctacaaaagaaaactgcatttcccccagtttctagtttcaacttctaattgaagcattgatttttctttacacttttggtattgacttggtatcactacaaattaaatattggcctctcctactaaagtgctcattttatgtgaagttatgaacagttcaatgttttctgagtgacaattttattgaattgttataaatgcatgaccatcatagcaggtaaaatctggggaaatattgatgaaatacaagcaatgtaacccatttctccatatgcacaaaccatggatctttttcggcaatagtgctattatattgtgttatgtttcatatttggttactagtgagcattgtttcatgaaagcattggcatgcagatgttttcattctgtctcatgctgtagctgggtcagtatggtggatgccagtcccatagggcaatatctgttagtcagctataatgagggaagtgcggggtcccattaatgagggaagtgagggatgggttagtcaactatgatgccagtcccatagggcaatatctgttagtcaactataatgagggatgggttactttatagtaagatgagatttggtatgtcttaggatgagggaagtggaacttatggaaccaagagctgggagcataccagatgcaacccatcattatgatgctatcattcaaccctgtttcagttgggggtaccaaatcaatctgaaaagctcacataagaatcaatgatataggctatggaaatctggcacttcaaaatttcagctgcgaactcaaagtgcctttgaagaaaacaaaaatacaggaacaataggatttacttaataaccttgatttattttacttgttactcttaattccacgaacttgaaatttatacataggtgacagagagtatacttgtcagtacattttcctggactatgacatgttgattgggtacctcaaaaaaactgagttgcatgattatactatgctaagttgtttaatggtcagcagctcagttttgagaaacactgtagaggaaaacatgtttttttttcccagaagactccttgatccttaaataaacactattcctctggctctgacacctttcctgcttcaccatggaaaacatcacaaattacatagggatgccccttgctcagccaatagtgctgcatcttccttcaagaattcataattctagttgtatattttcaatcactatgaatgtaactgtttaatttgaaaacctggttgttgtcacagctggccatgacaaacttgctacaattcttctcatcctcatcaattgtgaatcgtcaccagctgctatgcttgagcgaaacagcctagattgttaatctgacttcttagataagagttcagattgtgaaatgtttctgtgagaattaagtgcttccgtttgtgcagtaaggtcgatgtttatttgttaactttctcttaatcttaactaggggatatccccacgaaattttgcgtggactagttgaattgaattggatttaactatattttgtacacaccagatattagaagtcggatactcaaattggacttatacaactcttctcttctctttctatagatacaattgtactttctgtacagctattactaccaatttacaccgttataatttggtcccaccacgatctaatggcatagattttatactttttctccgattaatatggtaatctctaggcatacattgtatacaactattgctaccaatctacactgttataacttggtcccaccatgatctaatggcatagatttttctctctgattaatgtggtaatttctaggcctccagagcaaatgtggtgcctctttttagagttatcttcataatataatagatagatggatgccctgccaagtcttctgcgcattcccggagaaaacatagttgtgcatccttttctgtatgtgcatgtctgggcaacatagggtgctactcatcaattttttaaaaatagatgctctttgaaagagggcaacaaagaagagggaaaaggatagacaatttgtgggagtagccacagaatatgaaggaactcagcaagaaggaaaacgaatcacatgttgcattgttagtggctaatggttaatccacaatactttgactggtttgagtgacaagcagtagggttgggttaattacagctaccaaacgtttctagagttgaaatacttaaaaataaatctgagggtacattacaaagtctcctgtttaagagttgtgacagtatttggctgtaaatttatttatgcattgtttgtgactctctagtgaagcccttgctgttatcttgaagaaacaaagtagacaggtttcctatcaatactaagaatgttcgaattatatttatccttattttttcatttttattactatcaatgttgcaaaatagatgaagtaatttgagttcatctagtttttctctcctttttttgtaatggtgatttggtgcccaaaacaaattttcatgattgcgccttctattatggcttcttcccacgttcaaacatagtatgacctcttaacttaaacaggtctgccaggtaattgaactaaaatactcgataggaattctagggagatgtcttagtttacttagcctacaatatgttttgggatgttccaaaaccttctgaaaaacagtgacagtgtagcagactcatgacataaaaatagaagtagtaatcttttgcacgttaacagtgtatactatgaaacaaagcctcaatgagcctactctgaccgttctgtttacttatgtgcagtttttcatggatgactgccttcaacaactcattgatcgcattgatgctggagagggagagctgttgaagaacttggtactgagtgagagactttccaaacttgtccgaatgaggctggaaatgcagggaccttatatatcaaagtggcctcaagctctcagtatccaagtactccattatcaccacctcttattttcctttgcatttaactaaatcatctgatccttgtatgtcttaactttatttttctgtttgacagtcccaaccagcaaacatttcaacaagtttaaagcagagagctgtccttgttgatgagatttggcatgctgctggagatgctggatcagatattgattggtatgtgaagcgtactgtgcttggtggtatctactctacctcagaggtgtatatgttaactgacaattctccaggttggctttcctaagcttgatagttcaattccgattccttttatgcttaatgtttaaaaccagttttaataaagcgtccttttggaatacttagacagcgagtattacaacagaaaatgttccattgcctgaatctcaatttaaactgtaaatggctctaaatgcagataatgtaccagctttagttttctgtttaaataaatcatagtgaacaggggttgatatatatattttaaaaaccttttctatttgttccttccaccgtcttaaagatagttgttttggaagttcagaactcaacatggtaatgtgtacacataacgtaacaaaatggaatcagtaaatatctgggacccttatagatccttatgtagatatatatgtggttctgtaaggcatttcatcctttttggtagaaatatgggcctctgtgcccttcagtatctaaaagctgaaagcaggatgagaaacttaagggcaatgataaggaaagtgtattatctgtaactaatgtggtctgttacacgcatcctcgttcctgatagcatatacctgttgagtgaacgtcttccttttttcctgcctctgaacatcatagagaacgataccacgttcacattttcttcaaacggcattcgatatatacttctgttgaccgtttcctctttcctgtcaacgcttgacagatttccgcgatacatggacatttgtgagccgccgtatcaaggatgctcttgatcttcagaaaacttttcaggaggtattaagcacatcatgctcaagtcgtatgctattttagacctcatcatctcattctacgttatcaacctgctgacccgaagcgatcctgtgttgcaggccgcgtatctagcagaagccgtcggtgcaggcatggggggctccctacagggtgtcctgaacagacttttcaagaaatgaagtgcataagcgtgcgtttgatacttttcattctcgacatttccaatatatatcgctttttcgattcagctgttagtgcattccaagttaaataaagcaaactggattttgatcacgatttgcctacgctggtagtgatgatgtacataatagcatgtttttttacgatgaaatatcgtcaggacccacatgcgcacaaagatgaggttgctagatctacttaacacttgagttgttttcttttcatgattacctgtgaaccgaaaaatgttcaacttgtggttatgtaatgtcccacttcaggtagcgttggtttcgtcttccaattagaaataatgtcagtggttggttttggat</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0405100, RefSeq:Os03g0405100