Difference between revisions of "Os03g0436400"

From RiceWiki
Jump to: navigation, search
(Created page with "{{JaponicaGene| GeneName = Os03g0436400| Description = Similar to A.thaliana gene induced upon wounding stress| Version = NM_001056975.1 GI:115453678 GeneID:4333193| Lengt...")
 
Line 1: Line 1:
 +
Please input one-sentence summary here.
 +
 +
==Annotated Information==
 +
===Function===
 +
Please input function information here.
 +
 +
===Expression===
 +
Please input expression information here.
 +
 +
===Evolution===
 +
Please input evolution information here.
 +
 +
You can also add sub-section(s) at will.
 +
 +
==Labs working on this gene==
 +
Please input related labs here.
 +
 +
==References==
 +
Please input cited references here.
 +
 +
==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0436400|
 
GeneName = Os03g0436400|

Revision as of 19:37, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0436400

Description

Similar to A.thaliana gene induced upon wounding stress

Version

NM_001056975.1 GI:115453678 GeneID:4333193

Length

1562 bp

Definition

Oryza sativa Japonica Group Os03g0436400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:19041244..19042805

Sequence Coding Region

19041425..19042615

Expression

GEO Profiles:Os03g0436400

Genome Context

<gbrowseImage1> name=NC_008396:19041244..19042805 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:19041244..19042805 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctggtggtgggcgggcgccataggcgcagtgaagaagcggcaggaagagaacgcggcggccaccgagccgtccttccagagcgtcgccctcgtcgtcggctccacgggcatcgtcggcacctccctcctcgacatcctcccgctccaggacaccccgggcgggccctggaaggtctacgccgtctcccgccgcccgctccctccctggtccccgccggcctcccccgccgtcacccacctccacctcgacctcgccgactccgccgccgttgccgaggtcctcacgcccctcaccgacatcacccacgtcttctacgtcgcctggtccgcccaccccacggaggcccagaaccgcgaggtgaactccgccatgctccgcaacatcctctccgtcgtcgtccccaactgccccgctctcgtccacgtctgcctccagaccggccgcaagcactacatcggaccattcgaggtcatcggcaagatcgccgccccggacccgcccttcaccgaggacatgctccgcctcgattgccccaacttctactacgacctggaggacgtcctcttcaacgaggtctcccgccgcgacggcgccgtcagctggtccgtgcaccgccccaccgtcgtcttcggattctctccccgaagcgccatgaatgtcgtcggcagcctgtgcgtttatgccgccatctgccgcaaggagggcgctgtgctgcgatggcctggatccagggtcgcctgggagggattcagtgacgcgtccgatgcggatctcatcgctgaacacgagatctgggccgccgttgagccattcgccaagaatgaggcatttaattgcagcaacggggatctctacaagtggaaacttctctggccgatgctggcagaccaattcggcgtcgaatggtctggctacgagggagaagagagcagcttcaagcttgcagatgccatgtcggggaaggaggcagtgtgggcagagattgtcaaagagaatgatctcatggacaccgagcttgaagagatcaccaattggtggtttgttgatgccgtgttcggcgtccgcagcgagcatttggatagcatgaacaagagcaaggaacatggattccttggcttccggaacacggtgaattccttcaacacatggatagaaaagatgaaggttttcaagattgtcccatga</cdnaseq>

Protein Sequence

<aaseq>MSWWWAGAIGAVKKRQEENAAATEPSFQSVALVVGSTGIVGTSL LDILPLQDTPGGPWKVYAVSRRPLPPWSPPASPAVTHLHLDLADSAAVAEVLTPLTDI THVFYVAWSAHPTEAQNREVNSAMLRNILSVVVPNCPALVHVCLQTGRKHYIGPFEVI GKIAAPDPPFTEDMLRLDCPNFYYDLEDVLFNEVSRRDGAVSWSVHRPTVVFGFSPRS AMNVVGSLCVYAAICRKEGAVLRWPGSRVAWEGFSDASDADLIAEHEIWAAVEPFAKN EAFNCSNGDLYKWKLLWPMLADQFGVEWSGYEGEESSFKLADAMSGKEAVWAEIVKEN DLMDTELEEITNWWFVDAVFGVRSEHLDSMNKSKEHGFLGFRNTVNSFNTWIEKMKVF KIVP</aaseq>

Gene Sequence

<dnaseqindica>191..1381#gttgctttactacacgacacgacgcgcattaccagctcagctcggctcaggtcctccaacaacaaaacaaactactctgggctgggcttctcccgatcgatatcccccgttcgtccgtccgctctcctccttcccaaccggcaatccgccgatccgtccgacctctagcttgtacgctgccgctgccgccatgagctggtggtgggcgggcgccataggcgcagtgaagaagcggcaggaagagaacgcggcggccaccgagccgtccttccagagcgtcgccctcgtcgtcggctccacgggcatcgtcggcacctccctcctcgacatcctcccgctccaggacaccccgggcgggccctggaaggtctacgccgtctcccgccgcccgctccctccctggtccccgccggcctcccccgccgtcacccacctccacctcgacctcgccgactccgccgccgttgccgaggtcctcacgcccctcaccgacatcacccacgtcttctacgtcgcctggtccgcccaccccacggaggcccagaaccgcgaggtgaactccgccatgctccgcaacatcctctccgtcgtcgtccccaactgccccgctctcgtccacgtctgcctccagaccggccgcaagcactacatcggaccattcgaggtcatcggcaagatcgccgccccggacccgcccttcaccgaggacatgctccgcctcgattgccccaacttctactacgacctggaggacgtcctcttcaacgaggtctcccgccgcgacggcgccgtcagctggtccgtgcaccgccccaccgtcgtcttcggattctctccccgaagcgccatgaatgtcgtcggcagcctgtgcgtttatgccgccatctgccgcaaggagggcgctgtgctgcgatggcctggatccagggtcgcctgggagggattcagtgacgcgtccgatgcggatctcatcgctgaacacgagatctgggccgccgttgagccattcgccaagaatgaggcatttaattgcagcaacggggatctctacaagtggaaacttctctggccgatgctggcagaccaattcggcgtcgaatggtctggctacgagggagaagagagcagcttcaagcttgcagatgccatgtcggggaaggaggcagtgtgggcagagattgtcaaagagaatgatctcatggacaccgagcttgaagagatcaccaattggtggtttgttgatgccgtgttcggcgtccgcagcgagcatttggatagcatgaacaagagcaaggaacatggattccttggcttccggaacacggtgaattccttcaacacatggatagaaaagatgaaggttttcaagattgtcccatgatgcgttcaattgttttttatattattgcacatcttgttttctatgccattcatccaaattgctcccgaatttagttccattataaacattgctttcaaggttacatgttgtaaaatgctgtattctacaaaaaactagaaccgaataaaattaatcaagtggagaatgaattttatggatc</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0436400, RefSeq:Os03g0436400