Difference between revisions of "Os03g0654500"

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(Created page with "{{JaponicaGene| GeneName = Os03g0654500| Description = Conserved hypothetical protein| Version = NM_001057332.1 GI:115454392 GeneID:4333603| Length = 5052 bp| Definition ...")
 
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==Annotated Information==
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===Function===
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===Expression===
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===Evolution===
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==Labs working on this gene==
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==References==
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==Structured Information==
 
{{JaponicaGene|
 
{{JaponicaGene|
 
GeneName = Os03g0654500|
 
GeneName = Os03g0654500|

Revision as of 19:40, 22 July 2012

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os03g0654500

Description

Conserved hypothetical protein

Version

NM_001057332.1 GI:115454392 GeneID:4333603

Length

5052 bp

Definition

Oryza sativa Japonica Group Os03g0654500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:26272516..26277567

Sequence Coding Region

26272837..26273153,26273391..26273551,26273630..26273727,26273853..26274014,26275098..26275190
,26275300..26275362,26275940..26276085,26276195..26276352,26276424..26276616
,26277256..26277484

Expression

GEO Profiles:Os03g0654500

Genome Context

<gbrowseImage1> name=NC_008396:26272516..26277567 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008396:26272516..26277567 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcccccgccgccgaagtctcctcgtcgtcggcggagaccaccggctcctccgccggtagcgcgccctcgaccgccgccgccgccgccacctccacctcccattcgtcgtaccggcgcacggctcccccgctcctgctcctagcctcgctcgccgcgctcctcatcatctccaccggcgatgacaccgcggccttcgattccgccgccgtggggcggtccatcaaagatgttagtctggaaaatccagaggtgacttttgttccttcatccctgggtggacagttttgcgagcgagttcgcttgtctggaataccgaagttacatattggaagctatgcaaatcaaatacgagtcaaaatgaatgtttcccaatcaatgcctgaaaagttccattggaaaatagaaatttgctttcatgggaatgcttctatgggattatgccaatgtgagacaggtgaatggcaaaatttgcaaaatggcatgtggaatgctgtaaagtctccatatggaaacaaatatgttgatgttaaagtggctgataagacatctactaggttcagtatttccattcaagaagagtttcagaaatggcgtctagcttgcctcggtattggatttattctgctattcctatcacccattgttagcaaatgggcgcctttttactatagcagttctatggctcttggggtcctgcttgttgttctgattgtccttttccaggggatgaaattgttaccaatgggcaggaaaagtttattttacctcacaatttatggatctgtggtaggggttggctcctatgctgtacattatttctccacattggttgcttctattctggaaaattttggtttgagtgaagagatgcacaaccctgtatcaatcttcctgctggtagcaattgtcttgactggcgctggttttggttattggatggtcagaagattcatcctttcaaaagatggtagtgttgatgctgggatagcacagtttgtgaagtgggctatgcgtgttgttgctatatgctttgttatgcagagcacacttgatcctcttctagcgttattcgcgctggccgctagttggtggatttgttctgtgttcacagcatatagagctccaaagtcaatgacactgaagcaaaagcaatcaaaggcttctactcagccaatgtataataaaggatcacctaaccctcgccaaatccaattcttaagcccatccaagagggatattggaagaaccacatcaaacagttcagccacacagtatggctggagcaatttagccaatggaggactggtgtctccaacacttacaaagagggtggtacccgataatcaagatgaagaccactactccaccttccacaatatccaaccaaggaaatattcaaaggaagaatgggatgacttcacccagaaatccaccagaaaggcacttatggagtgcacggcaaccccagagtttgctagatgggttgctgataatgctcaccggctacgagtagagcagcaagatgacgcctcggaggacgagctcatcgagagttcctcaaattcatccgaagaaacagcacaggaagctgataccgggctgttcaggtggtattga</cdnaseq>

Protein Sequence

<aaseq>MAPAAEVSSSSAETTGSSAGSAPSTAAAAATSTSHSSYRRTAPP LLLLASLAALLIISTGDDTAAFDSAAVGRSIKDVSLENPEVTFVPSSLGGQFCERVRL SGIPKLHIGSYANQIRVKMNVSQSMPEKFHWKIEICFHGNASMGLCQCETGEWQNLQN GMWNAVKSPYGNKYVDVKVADKTSTRFSISIQEEFQKWRLACLGIGFILLFLSPIVSK WAPFYYSSSMALGVLLVVLIVLFQGMKLLPMGRKSLFYLTIYGSVVGVGSYAVHYFST LVASILENFGLSEEMHNPVSIFLLVAIVLTGAGFGYWMVRRFILSKDGSVDAGIAQFV KWAMRVVAICFVMQSTLDPLLALFALAASWWICSVFTAYRAPKSMTLKQKQSKASTQP MYNKGSPNPRQIQFLSPSKRDIGRTTSNSSATQYGWSNLANGGLVSPTLTKRVVPDNQ DEDHYSTFHNIQPRKYSKEEWDDFTQKSTRKALMECTATPEFARWVADNAHRLRVEQQ DDASEDELIESSSNSSEETAQEADTGLFRWY</aaseq>

Gene Sequence

<dnaseqindica>4415..4731#4017..4177#3841..3938#3554..3715#2378..2470#2206..2268#1483..1628#1216..1373#952..1144#84..312#atcagataataatagcaataaaacaaaaaaaaaagaagaagaagagtcgcttgaatttgcagcgtcgccgccgcccgcgcgagatggcccccgccgccgaagtctcctcgtcgtcggcggagaccaccggctcctccgccggtagcgcgccctcgaccgccgccgccgccgccacctccacctcccattcgtcgtaccggcgcacggctcccccgctcctgctcctagcctcgctcgccgcgctcctcatcatctccaccggcgatgacaccgcggccttcgattccgccgccgtggggcggtccatcaaaggtataatcgtgcccgctgtttggtgcaccatgggccggatttgggactgctgctgcgtttgcacggggatcgtagcgccgttctatctagggtttaggggcctttggggtggtttggggttttcgctgtaagatgcgtctggtagctgcttcatattttaggttttcatggggcttagttatagaatagggttttggagttggtttgtggaggggtgattggaaagttgcaactcttttgtcgcgaataaatctgcagtaacatgcctctccttttacttcagaaccaatgcatttttgataatgtctcaaaatttgttttgtattcagtggtttcggccttggctgaaggataagtattgtcattttgaagtatacagatggatgatttttacctgaataacatctcttaatagctagaccgtacccactttgttccgattcacctgtgtgtttggtatgagcttcttttcatgtatagcccttttacttacatgttccttttagcacaacacttggatttttgtatgataatccccttgtaggtttgcctatatggttccaatgtcctattattattatttttttgtgttccaatgtcttctacctaacatgctggtctaattgattacttccgcagatgttagtctggaaaatccagaggtgacttttgttccttcatccctgggtggacagttttgcgagcgagttcgcttgtctggaataccgaagttacatattggaagctatgcaaatcaaatacgagtcaaaatgaatgtttcccaatcaatgcctgaaaagttccattggaaaatagaaatttgctttcatgggtaagtcatactgtccaaagtgtaaatatacacatgcttcgggaaagaaatgagtcaattttcctttgcaggaatgcttctatgggattatgccaatgtgagacaggtgaatggcaaaatttgcaaaatggcatgtggaatgctgtaaagtctccatatggaaacaaatatgttgatgttaaagtggctgataagacatctactaggttcagtatttccattcaagaaggtgtgtattattcatgaacctaatatttgttctaccagtcatacaatcaagagcatctatgtccattccttccctataattactgttcttgttctgtgtatttatgcagagtttcagaaatggcgtctagcttgcctcggtattggatttattctgctattcctatcacccattgttagcaaatgggcgcctttttactatagcagttctatggctcttggggtcctgcttgttgttctgattgtccttttccaggtattctcaatcaaataattttgtatgtttctttttatcattgttggtatagacacttcgtattgtggctggccagcagcaactgcctaaatagttcctagacaggctaggtgcttgctaagggaacaccaacttactgttcaataaagactcatattgaaagacatgaaaatacaacattgttaagttaactggctgcattttgttattggggcacttccaccaagtttattattaaggagtaatatacattgttaacttactgcatttcgctaaaacacctcactcttgagtttattcataatattttcaagtctaaacttagatctcttgctctaattagcgaagatagttttatttttctcttagtttcctgtaaaatagagcatgaagcaactctaaattctgtgacaagaccaagaagtaataacattttcttttgataaggaacgatcagtgactcaattttaacaagtattttattttgcttatggaaaaatgtgttctatcaaattgattgatggtctgtcctggcgaaaaaaaattgattgatggtctgacctatttttcgttataggggatgaaattgttaccaatgggcaggaaaagtttattttacctcacaatttatggatctgtggtaagttacctatgcccacaacttcctggtattaattttattgatatactcttcaggaaattgcaattaattcttcttacatgtttatcattactattctgatgttcaggtaggggttggctcctatgctgtacattatttctccacattggttgcttctattctggaaaattttggtttgagtgaagagatgcacaaccctgtaagtcattcctcttgaatgtgtcaatgatatcaattaactgatccgtttattacttgacatagtatatttgcttgctatctgcttgcttataatttctgttccatagggcacaaagcacatcatctgttgttaagttgtaatgactaataaaccacttcagaaaaatatgaatttgaaaaatgaattatagaaataataatgcatttgtattaaagctaaagtaaagtgttcttggttctttattttacttttgtcctgtctaagctgaattgtaactaccagtaaagtttattttgtgttttcctgttcattttggtgttcatactttatccttattttctccagtagtaaattgacttgaaacctctctctaaattgtcccctaagatttgattcaaacagtgccctattgaatgattcaatagtaagtgttgggactaacatgagatgactacaaactataaaagtaatcaataataatgcgtgatttttctagggtaggaaatcatacggtagcatagttattaatgttgggttggaacatcagtaatttgatttacagggcagggcttatattttgtgaaaagacgctgatttcaagttctactgctcagattcagtgttatctggacactgacacgtgtcaggttctgtctcggatttccatgtccaattcgttttttaaaaaaattggatgtgcgaaatactacctggaatccaccacaggtggagtccaatttcggactctgggattttttctccttgttattgatgttttgatgctaaaaaagctactatatgtgcaaaagcataatataaattacaattattattttttgtctacatatggaattgtatatctttattttcatctatgcatggtaggcctgcttgtttacttatttagcatatgcatgtgataccattatgcacaatataattgaatatctattttcagtagttaacacataattttgtgatccctcgcttcttgttgcatgaacaatggaatctattatgttacatgcgtgtttgtttacattgtgccacctaatgtaatgagttaaaactggattacaggtatcaatcttcctgctggtagcaattgtcttgactggcgctggttttggttattggatggtcagaagattcatcctttcaaaagatggtagtgttgatgctgggatagcacagtttgtgaagtgggctatgcgtgttgttgctatatgctttgttatgcaggtgtggtttatttttacatatctttggcattttcttggtttctgagccgtggttactaaatctgccagattttattatcttgtttagttccctaagaacatgtctggtatgtatttattttgcagagcacacttgatcctcttctagcgttattcgcgctggccgctagttggtggatttgttctgtgttcacagcatatagagctccaaagtcaatgacactgtgagtcccttcagctatctctggtctgtgtgcacgttcactgtcattgaagtcctcaacatgctgattctgctgcaggaagcaaaagcaatcaaaggcttctactcagccaatgtataataaaggatcacctaaccctcgccaaatccaattcttaagcccatccaagagggatattggaagaaccacatcaaacagttcagccacacagtatggctggagcaatttagccaatggaggtaacataactgctactgttgtatgccttcctggaaatgattttttggggctggtctgtaccccctatagtgaactgtcagtaagaatattaacacatttgaacttttgaagtgctgttttaatttttgtctgtgtgttgtactagaatggtgctcttttaagcatgattaacttgagtatctttaaaagcatcgtatttgtagcatttgaaattggctttctactggtttttgcaggactggtgtctccaacacttacaaagagggtggtacccgataatcaagatgaagaccactactccaccttccacaatatccaaccaaggaaatattcaaaggaagaatgggatgacttcacccagaaatccaccagaaaggcacttatggagtgcacggcaaccccagagtttgctagatgggttgctgataatgctcaccggctacgagtagagcagcaagatgacgcctcggaggacgagctcatcgagagttcctcaaattcatccgaagaaacagcacaggaagctgataccgggctgttcaggtggtattgatcttggcatgctaagaggctatgccgaattgctgatgctgtgcacgctctgtagaagtaggaggcagtaagaaagctagttagcagtagggttagcatttctattatttccactattgttcccacggttcatgcttcttggtgactgtagttagttagcgatctcaagttaactaatggtagatttagcttagttcgtaacgggccatggatcggtagttagctagttgcctagagttgatcgacttaccagagggctcgaacttgtgtaaatgcagtctattcgatccatcataattgataaatcaatcctgttggaacg</dnaseqindica>

External Link(s)

NCBI Gene:Os03g0654500, RefSeq:Os03g0654500