Difference between revisions of "Os03g0680200"
(Created page with "{{JaponicaGene|
GeneName = Os03g0680200|
Description = Tetratricopeptide-like helical domain containing protein|
Version = NM_001057436.1 GI:115454600 GeneID:4333723|
Leng...") |
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| + | Please input one-sentence summary here. | ||
| + | |||
| + | ==Annotated Information== | ||
| + | ===Function=== | ||
| + | Please input function information here. | ||
| + | |||
| + | ===Expression=== | ||
| + | Please input expression information here. | ||
| + | |||
| + | ===Evolution=== | ||
| + | Please input evolution information here. | ||
| + | |||
| + | You can also add sub-section(s) at will. | ||
| + | |||
| + | ==Labs working on this gene== | ||
| + | Please input related labs here. | ||
| + | |||
| + | ==References== | ||
| + | Please input cited references here. | ||
| + | |||
| + | ==Structured Information== | ||
{{JaponicaGene| | {{JaponicaGene| | ||
GeneName = Os03g0680200| | GeneName = Os03g0680200| | ||
Revision as of 19:40, 22 July 2012
Please input one-sentence summary here.
Contents
Annotated Information
Function
Please input function information here.
Expression
Please input expression information here.
Evolution
Please input evolution information here.
You can also add sub-section(s) at will.
Labs working on this gene
Please input related labs here.
References
Please input cited references here.
Structured Information
| Gene Name |
Os03g0680200 |
|---|---|
| Description |
Tetratricopeptide-like helical domain containing protein |
| Version |
NM_001057436.1 GI:115454600 GeneID:4333723 |
| Length |
6822 bp |
| Definition |
Oryza sativa Japonica Group Os03g0680200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 3:27748838..27755659 |
| Sequence Coding Region |
27748838..27748925,27749101..27749169,27749821..27749994,27750813..27750944,27752196..27752335 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008396:27748838..27755659 source=RiceChromosome03 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008396:27748838..27755659 source=RiceChromosome03 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccgagggggcgcgtgcccggcggctcgaccgccaacttcagcacccacctcatcgcggcccagctcgggatgcagtgccgcatgggtcccgcggcggcggagcagatgaggcgcgtcatcgcgtcgtcggactgcgacaccggccgcgtcatgaggatgtttggtgccatggaaggtggcgacagtgattctgattctgatgactctgcggagacggagaaagttgggccacttcatgaggcagcaagcgcagggaaaatggatacttgcaaacatttggtggagcagcttgggtttgacatcaatgctgaagcaagtgatgatttgggtatgacacctttggcttgtgcggtgtccaagggaaaagcaattgctgtgaggtattttcttgacaaaggtgctgatccaaataagcaagacaacatcggttttactcctctgcactatgctacaaaagaagggtatgatggactggcacgactactgctgtctaaaggggctagtgttgatgttatttcttctaaaggcacagccctgcatcttgctgcctccagttggaagtctggcatcatgaagattctattggagcacaatgcagatccaaacaaggtctccgcagattcagagacaccattagctgcaacacttattgcttctgatggactgaatgaacctgctgtgctgaagtgcataaagcttcttgttaaggctggtgctaatttgaaccgcgctattcctgatacaccactggtgatagcaactaacaaagactttgttgaatgtgttgagtacttgttggaggctggtgcaaacgccaatattccaactaataacggtggtaagacaccaatagaaatagccgcgaagtctggaagaaggaagcttgtggagattctatttccttgcacgttgccaattaaaggtgtgtcaaactggactgttgaaggaatcatcacccatgtgaaatcaaaaaaatcaaagaagaaagcatgcgctcaggataaggaaagtggtacagacaaaaaggctcagttgaaatcattgggtgcaagtgcagttcaggggaaggactatgttggtgcatccaaattctacagtgaggccatccagctggatcctaccgatgcaacattgcattcaaataggagcttttgctacctaaaaagtggtgaagcacgggaagctttggttgatgctaagacttgcataggactgaaaccagattggccaaaaggttactatcggaaaggagctgccctgatgtcgctcaaggaatacaaagaagcatgtgatgcattcatggatggagtgaaactggatcctgcaagtggggagatgcatgaagcattttgggaggcagccgcggcattgaagaagaaacatttggctgggaagactgtcagctcatttgattag</cdnaseq> |
| Protein Sequence |
<aaseq>MPRGRVPGGSTANFSTHLIAAQLGMQCRMGPAAAEQMRRVIASS DCDTGRVMRMFGAMEGGDSDSDSDDSAETEKVGPLHEAASAGKMDTCKHLVEQLGFDI NAEASDDLGMTPLACAVSKGKAIAVRYFLDKGADPNKQDNIGFTPLHYATKEGYDGLA RLLLSKGASVDVISSKGTALHLAASSWKSGIMKILLEHNADPNKVSADSETPLAATLI ASDGLNEPAVLKCIKLLVKAGANLNRAIPDTPLVIATNKDFVECVEYLLEAGANANIP TNNGGKTPIEIAAKSGRRKLVEILFPCTLPIKGVSNWTVEGIITHVKSKKSKKKACAQ DKESGTDKKAQLKSLGASAVQGKDYVGASKFYSEAIQLDPTDATLHSNRSFCYLKSGE AREALVDAKTCIGLKPDWPKGYYRKGAALMSLKEYKEACDAFMDGVKLDPASGEMHEA FWEAAAALKKKHLAGKTVSSFD</aaseq> |
| Gene Sequence |
<dnaseqindica>1..88#264..332#984..1157#1976..2107#3359..3498#3595..3702#3851..3976#4198..4362#4714..4815#6148..6318#6402..6481#6759..6822#atgccgagggggcgcgtgcccggcggctcgaccgccaacttcagcacccacctcatcgcggcccagctcgggatgcagtgccgcatgggtacgtgctccgatccggggctttcttttctttcctttttttttcatttttttgatccggttttctctgtattctggctgcttcgcgcttcgatccgtcacgggttggggtttcctgcttcggaaaatcgcctaattttgttgttgttgcttgccgtgccatggcatggatgcaggtcccgcggcggcggagcagatgaggcgcgtcatcgcgtcgtcggactgcgacaccggccgcgtcatgagtgagatcaccaccagcccacgctctcctttccagctcccgccccggaaaaagggctcctttttttatataatatatatttttaaaaaaattttgggctagggttttgcttgggtttttggctactggaacattttggcatggcatgggtaatgttggagtggttttctacttcctcatggaagattagcgcgaaaggcatggttattttaggctccactgttcgtttcccgatcagttcggatttggaagatcgtgttagtaagcacgcatgcgtgtttggtggttggttgaggccgaatcctcgtgcctgtattagctagtattataggtgtagtccgatactgttttgggggaaaaaagagttttttttattcgttctagtcaatgctggtttactattcatatcatgcatctagtgtagcttgatgatattgtaacctcgttgctcgttgttctgtccctttggtgaaacattttttgttctcattttgtaatcagtcagtaggcctctggtgtggtttaggaaattcccccttcttggcgacctatttatatcttggtttactccatggcatgttgagaaaagataattagactgttcagcgattatttatcttactgtgtttcttcttaaaatggcttgttgaagggatgtttggtgccatggaaggtggcgacagtgattctgattctgatgactctgcggagacggagaaagttgggccacttcatgaggcagcaagcgcagggaaaatggatacttgcaaacatttggtggagcagcttgggtttgacatcaatgctgaagcaagtgatgatttgggtatgttccatcgcagtttacaacttgaatgctttcatgtttctcctaggtactattttgtgcaccatctaatgtaagcttttagatgcaacacaaagatcatttgcgatgtaaattgttaacgaacatcatgaagggaccttaccttaacagctccagcaccggaagctctggcttcaaatgccacatggtttttcttgtgtattgtgatcattttatgatcatcaatggtgtgccaacattgatgaaatcataatcagctgatgtaatacctttgtctttattttttcaagaatatcttctcccattttgtttgcctcgtctccgtgtttttatctgatgtttattggtcgtgcaaaattgtgtctctggctactggtccttcactcctggtgcatatgttttcccatgccactttgttaaagtgtatgctattaatttgatatttgttctgcttctatcacataatataaacatgtgtggtgatagccaaatatgttccgagaggcccaagtaattgggtaacgaatatgactgccaataatgtttatttttttaggctggtcatattgcatcgagcgcattgtccagataaaccgggaagctagtgcctttcatttgtgcatttagttttggttgatatgcatcataaatttactattttctaaagcggagggtcccctgttgcatgttgacttgacgtatcttgtgaattgttgctatctgcatataactattatgtgctttgttgaattatataacttttatgccccatgttttgttgtgactaaattgcttgatcataacactcatggcaggtatgacacctttggcttgtgcggtgtccaagggaaaagcaattgctgtgaggtattttcttgacaaaggtgctgatccaaataagcaagacaacatcggttttactcctctgcactatgctacaaaagaaggtgtccttttgcacatgctggcatttatatttgcagttcttgtaccgatctgtcgctgcatgaaagaaatgaattacaaatgcatccacattatttatcatattttcgtaattttcttatctggttatcatccctaacttcctacccactctatcccaagatatagctaccttttacctatgaatctggacaagtgcttggccagactcataacggaaggtaggtatatcttgggacagtggaagttcctttttgggataataatagtagccaatttttgtcctaaagcctttcttgaggatcagtttggtttctgaaaattgttgtttgtccaataaagttatccaaaattggttttttggttcagaatgatccttgaacccactcgaagtgccacatgggcaatcaaactgctgagcagtagtccgtggttggcagcttccttgtgaaaatatattatgcccttacgtctcacataaaaaagaaaggaaaaagtgttgcccgaaaccttatagtcctctcttcatgtttcccttaaattatttatttttagctcctacttcttgaacttcatcatcttctttctttcttttgctatgggagacatgagtggcataatatatttttcagaatggagcttgccacaaagtaaaagcattagctgagttgggtttcctaaatggtgcttcaggtgggctcaacgaccattttgaatgaaatgccaaacttggaacacttgggcaaaattcgatgggctaaattggtcattatccttttgtttccttatgacattcattgtagctaacttgagatgggagtggggagcctcatattatatcaatatcttagacatggataattatgctgcatgattttcatattcaacatttttctccactctgtgttagcatggttatgttttaagttttatacttagtacaaaatatatgtatacttttgagtcagatcttgtcatggttatgctttagggaaatttaagaatcgtagaacaaagtagtcaatattggcatattgcacatgggctaatccaaatcttcatctatatgtgtcttcactgtcatcgattacttatgctgatacaaaaatcacccccatgcatattaagcactttgttttaaggtttctaaactttcctaaaagaggtgcacggaagcaacggaatgtcgaatatccaagttctaaaattcttcactggagtacgaccctatctatattacattttttttacagggtatgatggactggcacgactactgctgtctaaaggggctagtgttgatgttatttcttctaaaggcacagccctgcatcttgctgcctccagttggaagtctggcatcatgaagattctattggagcacaatgcagatgtaatgggttatttaatgtttttgtctgcacaactacttgtctacaaagttctattgtccaccacatggctaaccttttcattttgaaaatcgtagccaaacaaggtctccgcagattcagagacaccattagctgcaacacttattgcttctgatggactgaatgaacctgctgtgctgaagtgcataaagcttcttgttaaggtctgttacccaattcagaatgttctttacctttaaatcaccgggggggattgtattatgtgatgtgcttctaattagatccatatgctttatttgaactatgatatccacattttttttcttcatattatgatgtctgtatacacaggctggtgctaatttgaaccgcgctattcctgatacaccactggtgatagcaactaacaaagactttgttgaatgtgttgagtacttgttggaggctggtgcaaacgccaatattccaactaataacgtgagttctaaactcttttttattgcgatccttatttgattttttgagtgtgtgtatgcttgctgttggggggcttgctgctgctgctgctttaatgtaatgtgttatgttgtcaacatgccatctagatggtgcgcaagggcctatgtcttctattacggagtattacttattacatattgtgaaatatttttctccatctctcttttgatacgcaatagggtggtaagacaccaatagaaatagccgcgaagtctggaagaaggaagcttgtggagattctatttccttgcacgttgccaattaaaggtgtgtcaaactggactgttgaaggaatcatcacccatgtgaaatcaaaaaaatcaaagaagaaagcatgcgctcaggtctgaacgtctgaactctcagctcagtgttgtatgtgcgattatgcatttctttgttgtgtatcttctgtagtctgtaactttttccctgcttctgagatcagagttaaaaatgcatgctatctctatcttgtgcttcacctgcctacctgctagtaacaaacatgtactagttcatctttttacctacacactgactctgttagttagtcaagccgtggtctgcataggtacttgcaagaattgtactgcattcctatcagaaagccatcgtcatgcgtaagagtaaacaagtagtcaacaagaggctttaatttggagttctcagtttaagttttcttaatgatttaggataaggaaagtggtacagacaaaaaggctcagttgaaatcattgggtgcaagtgcagttcaggggaaggactatgttggtgcatccaaattctacagtgaggtatattttgtgcatcatatcttcccattggaaagttctattagttcctactccctctaatcccaaatataagtcattttggacttgtgctgtgaattaagaagataactcaaatgactttgttgcccttcatttattacattggaatttgtaaaagatgagggtgagaggagtagcaactggcatttccttggtgaggttaaacatggaagaggatgaaaaagtgcctggaagttctaataccagttacatttaggaaagagttgacttaccacatttggaattctgctatcgttacttatacacctgttgtcttcactacagtaataatactttatgtttgattagtttttctttaggcatatttagtaatttccttggtatatactggcaaatggcatattaccagaaattagctggaaggggaatggctaaatgtgaagtcttgtttctgtgtgcaaaaaatattatgaatgctttttgagccatggttggatgaaacctgataactacaggacaaataaccaatgtgttgagttttttcctctcttgttttcaaactagacctgatattccactgaccaaatagaccaacttatggttgattttgtttgtttcccaagctcttcttttgtatcttgtgtgcttaaaaacgttattttagaactgataaaattggcattttacatatctggtttggtacttggtattgaactggttctgtgtcatagttagcttgtttcaattatgagcctcctggagactttctcagagtgaatagttgaaaccttggcactcagatttatgttaacaagtgatcttttggaattggatttccctgtgaaacaagtttgattttagccacagaaatcaaagcttgttcataattggaactactggataccttgagcgttgcagtgttaatttatagatacttcaaaaaaaaaacatttgaagatgcaatacagattgacatgaattggaaaatagtaaagagataatattcaaatataccaatcacaaagtaaaaaataagcaaaaaaagaacaagaaaagtgatcgaataaataaaatgtttggagtaacatgatcatgggagtatccaaaggctcttgttttctgtgatatgtggcatgttgagttcatagcaagggttaataagtgggttccaattatataggaattttatgattcatcaagcatgactattgtattgtttccaagtcaaatcgatagaagaaattataattgatagactattggtcttaggttggtttatgttgtgtgatcacagattcacatattttcctcttattgcttgtttttatgtaggccatccagctggatcctaccgatgcaacattgcattcaaataggagcttttgctacctaaaaagtggtgaagcacgggaagctttggttgatgctaagacttgcataggactgaaaccagattggccaaaaggttactatcggaaaggagctgccctgatgtcgctcaaggtgaactaaaaatgcaactcctgtcttcagcttctttatacgtcacaacctgtagataacccgctgcacctttttattattaggaatacaaagaagcatgtgatgcattcatggatggagtgaaactggatcctgcaagtggggagatgcatgaagcattttggtactcatttctatccattacctttctttctcttcaacacagttctgaacttctgaatggcctttcacaccaaaatgaccctgtcccacaaaacggtacctgttcttatgaatcataatgctcatatgttatctgtgttaatgaaaccgtgagcctgatcattgaattgtttaccattctaatagtagcagttttttttttcacaaaatagaataattgcatggtagcttgaagccacctagggattttctaaaaaataatgttcttaccctttcagggaggcagccgcggcattgaagaagaaacatttggctgggaagactgtcagctcatttgattag</dnaseqindica> 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